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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LMS | 23441 | 2023-07-03 | 2021-02-05 | 3.5 | 4.13 | 3.61 | 4.0 | 0.019 | 1.52 | 0.0 | 0.09 | 10.07 | 0.01 | 2.432 | 0.41 | 0.00 | 0.2 | 99.8 | 0.0 | 0.57 | 0.81 | 0.83 | 3.45 | 4.0 | 0.002 | 0.59 | 0.0 | 0.04 | 14.69 | 0.00 | 2.183 | 6.65 | 0.38 | 1.5 | 98.5 | 0.0 | 0.72 | 1.43 | 0.74 | 0.82 | 2.22 | 4947 | 613 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 6HLQ | 0239 | 2023-07-15 | 2018-09-11 | 3.18 | 3.18 | — | 3.2 | 0.006 | 0.90 | 0.0 | 0.06 | 12.11 | 0.01 | 1.742 | 5.18 | 0.09 | 4.6 | 95.4 | 0.0 | -4.49 | 0.68 | 0.82 | 4.22 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 16.51 | 0.00 | 1.964 | 9.13 | 0.40 | 3.0 | 97.0 | 0.0 | -0.28 | 0.72 | 0.69 | 0.86 | 3.21 | 32731 | 3926 | 22 | 73 | 9 | 0 | 0 | logfile |
✔ | 7WV9 | 32850 | 2023-07-04 | 2022-02-10 | 3.36 | 3.51 | — | 3.6 | 0.005 | 0.77 | 0.0 | 0.05 | 13.78 | 0.00 | 2.206 | 11.96 | 0.53 | 5.0 | 94.9 | 0.1 | -0.80 | 0.57 | 0.67 | 1.09 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 15.49 | 0.00 | 2.234 | 12.64 | 0.32 | 4.6 | 95.4 | 0.0 | -0.65 | 0.94 | 0.59 | 0.71 | 0.52 | 8848 | 1141 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LPB | 23475 | 2023-07-09 | 2021-02-11 | 3.54 | 3.01 | 3.50 | 3.6 | 0.012 | 1.07 | 0.0 | 0.06 | 18.06 | 0.01 | 2.226 | 10.00 | 0.00 | 5.7 | 94.3 | 0.0 | -1.27 | 0.61 | 0.75 | 2.16 | 3.6 | 0.002 | 0.51 | 0.0 | 0.04 | 16.38 | 0.00 | 2.293 | 5.88 | 0.25 | 1.7 | 98.3 | 0.0 | 1.02 | 1.62 | 0.60 | 0.69 | 1.48 | 18392 | 2384 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 6UW6 | 20918 | 2023-07-09 | 2019-11-04 | 3.66 | 3.79 | — | 3.8 | 0.015 | 1.24 | 0.0 | 0.07 | 16.71 | 0.01 | 2.299 | 5.68 | 0.00 | 8.4 | 91.6 | 0.0 | -4.85 | 0.70 | 0.84 | 2.14 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 17.33 | 0.00 | 2.192 | 7.93 | 0.33 | 6.4 | 93.6 | 0.0 | 0.47 | 0.58 | 0.69 | 0.83 | 1.52 | 20072 | 2408 | 8 | 0 | 20 | 0 | 0 | logfile |
✔ | 6WB1 | 21584 | 2023-07-04 | 2020-03-26 | 4.7 | 4.87 | — | 4.6 | 0.002 | 0.50 | 0.0 | 0.04 | 12.49 | 0.00 | 2.204 | 7.21 | 0.55 | 4.5 | 95.4 | 0.1 | -4.82 | 0.86 | 0.80 | — | 4.6 | 0.002 | 0.58 | 0.0 | 0.04 | 13.01 | 0.00 | 2.198 | 8.49 | 0.00 | 3.6 | 96.4 | 0.0 | -0.61 | 0.69 | 0.87 | 0.83 | — | 8235 | 944 | 4 | 75 | 0 | 0 | 0 | logfile |
✔ | 7VFX | 31962 | 2023-07-05 | 2021-09-14 | 2.8 | 2.73 | 2.85 | 2.9 | 0.003 | 0.65 | 0.0 | 0.05 | 13.95 | 0.00 | 2.225 | 5.38 | 0.00 | 3.1 | 96.9 | 0.0 | 0.41 | 0.70 | 0.87 | 3.94 | 2.9 | 0.002 | 0.55 | 0.0 | 0.04 | 16.05 | 0.00 | 2.136 | 4.82 | 0.72 | 2.9 | 97.1 | 0.0 | 1.09 | 1.24 | 0.71 | 0.89 | 3.74 | 9004 | 1139 | 7 | 0 | 4 | 0 | 0 | logfile |
✔ | 7EW4 | 31347 | 2023-07-05 | 2021-05-24 | 3.2 | 3.38 | — | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 13.43 | 0.00 | 2.237 | 7.77 | 0.00 | 2.0 | 98.0 | 0.0 | 1.05 | 0.67 | 0.74 | 2.41 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 15.13 | 0.00 | 2.101 | 8.96 | 0.62 | 2.8 | 97.2 | 0.0 | 0.62 | 0.39 | 0.70 | 0.81 | 2.46 | 8929 | 1145 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7P1K | 13163 | 2023-07-04 | 2021-07-01 | 3.64 | 3.10 | 3.45 | 3.2 | 0.014 | 1.12 | 0.0 | 0.05 | 13.27 | 0.02 | 2.023 | 12.65 | 4.61 | 4.2 | 95.8 | 0.0 | -0.19 | 0.54 | 0.70 | 1.60 | 3.2 | 0.002 | 0.63 | 0.0 | 0.04 | 15.36 | 0.00 | 2.228 | 6.92 | 0.29 | 4.3 | 95.7 | 0.0 | 1.89 | 1.26 | 0.56 | 0.70 | 1.85 | 6892 | 866 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 7LPC | 23476 | 2023-07-07 | 2021-02-11 | 3.06 | 2.87 | 2.85 | 3.1 | 0.013 | 1.23 | 0.0 | 0.21 | 20.11 | 0.00 | 2.188 | 5.69 | 0.00 | 2.0 | 98.0 | 0.0 | 0.83 | 0.64 | 0.80 | 2.87 | 3.1 | 0.002 | 0.44 | 0.0 | 0.03 | 14.73 | 0.00 | 2.212 | 6.03 | 0.07 | 2.4 | 97.6 | 0.0 | 2.33 | 0.57 | 0.66 | 0.84 | 2.71 | 15256 | 1816 | 8 | 0 | 40 | 0 | 0 | logfile |
✔ | 7o6P | 12739 | 2023-07-04 | 2021-04-12 | 2.04 | 2.55 | — | 2.1 | 0.008 | 0.59 | 0.0 | 0.05 | 11.73 | 0.00 | 2.140 | 6.08 | 0.93 | 1.8 | 98.2 | 0.0 | -0.54 | 0.90 | 0.88 | 5.90 | 2.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.52 | 0.00 | 2.251 | 5.96 | 0.00 | 2.0 | 98.0 | 0.0 | 2.22 | 0.39 | 0.90 | 0.92 | 5.36 | 8276 | 1022 | 8 | 0 | 0 | 268 | 0 | logfile |
✔ | 8A0E | 15052 | 2023-07-06 | 2022-05-27 | 2.8 | 3.09 | 2.92 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.10 | 0.00 | 2.176 | 2.58 | 0.00 | 1.7 | 98.3 | 0.0 | -0.22 | 0.76 | 0.89 | 4.52 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 15.33 | 0.00 | 2.194 | 2.70 | 0.55 | 1.5 | 98.5 | 0.0 | 0.08 | 0.31 | 0.74 | 0.90 | 3.82 | 12082 | 1526 | 9 | 0 | 7 | 0 | 0 | logfile |
✔ | 7EW7 | 31349 | 2023-07-06 | 2021-05-24 | 3.27 | 3.91 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 13.52 | 0.00 | 2.016 | 6.73 | 0.71 | 3.6 | 96.4 | 0.0 | -2.17 | 0.56 | 0.74 | 2.49 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 15.58 | 0.00 | 2.134 | 6.73 | 0.20 | 3.8 | 96.2 | 0.0 | -0.29 | 0.95 | 0.60 | 0.78 | 1.96 | 9004 | 1144 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WPZ | 32693 | 2023-07-04 | 2022-01-24 | 3.8 | 3.48 | — | 3.6 | 0.013 | 1.41 | 1.0 | 0.11 | 9.57 | 0.01 | 2.431 | 1.73 | 0.74 | 2.2 | 97.4 | 0.4 | -0.13 | 0.75 | 0.74 | 2.80 | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 13.59 | 0.00 | 2.222 | 4.23 | 0.00 | 2.2 | 97.8 | 0.0 | 1.68 | 1.38 | 0.78 | 0.79 | 2.18 | 5756 | 787 | 8 | 0 | 15 | 0 | 0 | logfile |
✔ | 7WHR | 32509 | 2023-07-08 | 2021-12-31 | 3.4 | 4.06 | — | 4.0 | 0.003 | 0.60 | 0.0 | 0.05 | 13.11 | 0.00 | 2.190 | 10.13 | 0.00 | 7.4 | 92.6 | 0.0 | -2.33 | 0.66 | 0.74 | 2.21 | 4.0 | 0.002 | 0.65 | 0.0 | 0.05 | 15.04 | 0.00 | 2.235 | 10.83 | 0.11 | 6.9 | 93.0 | 0.1 | -2.70 | 0.36 | 0.63 | 0.70 | 1.70 | 16914 | 2184 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VYG | 21459 | 2023-07-07 | 2020-02-26 | 3.5 | 3.58 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 14.05 | 0.00 | 2.094 | 7.99 | 0.54 | 9.2 | 90.8 | 0.0 | -3.60 | 0.73 | 0.84 | 3.44 | 3.5 | 0.002 | 0.58 | 0.0 | 0.04 | 16.12 | 0.00 | 2.160 | 7.84 | 0.20 | 6.9 | 93.1 | 0.0 | -0.78 | 0.43 | 0.71 | 0.83 | 2.28 | 13616 | 1732 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ji0 | 22341 | 2023-07-03 | 2020-07-21 | 2.95 | 3.30 | 3.08 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 12.97 | 0.00 | 2.233 | 3.94 | 5.91 | 4.5 | 95.5 | 0.0 | -3.04 | 0.73 | 0.84 | 4.32 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.32 | 0.00 | 2.210 | 3.66 | 2.96 | 3.8 | 96.2 | 0.0 | 1.47 | 0.45 | 0.70 | 0.83 | 3.46 | 3556 | 432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N0L | 24108 | 2023-07-03 | 2021-05-25 | 2.8 | 2.17 | — | 3.1 | 0.065 | 1.95 | 0.0 | 0.04 | 21.58 | 0.00 | 1.675 | 18.13 | 9.23 | 2.0 | 98.0 | 0.0 | -6.10 | 0.56 | 0.80 | 3.16 | 3.1 | 0.002 | 0.66 | 0.0 | 0.04 | 19.76 | 0.00 | 2.190 | 15.04 | 5.90 | 0.3 | 99.7 | 0.0 | 1.88 | 1.26 | 0.56 | 0.81 | 2.04 | 5270 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X15 | 21989 | 2023-07-05 | 2020-05-18 | 3.05 | 3.20 | — | 3.2 | 0.009 | 1.26 | 0.0 | 0.05 | 19.04 | 0.01 | 2.281 | 3.63 | 0.00 | 3.1 | 96.9 | 0.0 | -3.80 | 0.73 | 0.87 | 2.90 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.45 | 0.00 | 2.161 | 5.83 | 0.10 | 2.8 | 97.2 | 0.0 | 1.71 | 0.44 | 0.72 | 0.88 | 2.57 | 10026 | 1260 | 9 | 0 | 51 | 9 | 0 | logfile |
✔ | 6XLF | 22242 | 2023-07-07 | 2020-06-28 | 3.15 | 3.29 | — | 3.2 | 0.003 | 0.47 | 0.0 | 0.04 | 12.70 | 0.00 | 2.115 | 6.23 | 1.20 | 1.6 | 98.4 | 0.0 | -4.12 | 0.75 | 0.79 | 2.37 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 15.92 | 0.00 | 1.975 | 9.75 | 0.33 | 2.5 | 97.5 | 0.0 | -0.64 | 2.49 | 0.78 | 0.85 | 2.67 | 13653 | 1680 | 6 | 0 | 6 | 0 | 0 | logfile |