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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JZX | 22583 | 2023-08-18 | 2020-09-02 | 3.4 | 3.20 | — | 3.4 | 0.009 | 0.92 | 0.0 | 0.05 | 15.94 | 0.01 | 2.239 | 5.33 | 0.40 | 7.0 | 93.0 | 0.0 | -3.94 | 0.91 | 0.86 | 2.98 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.43 | 0.00 | 2.113 | 10.35 | 0.00 | 6.4 | 93.6 | 0.0 | -0.51 | 0.38 | 0.92 | 0.87 | 2.30 | 23948 | 2954 | 11 | 61 | 0 | 0 | 0 | logfile |
✔ | 6U8S | 20691 | 2023-08-17 | 2019-09-05 | 3.14 | 3.91 | 3.03 | 3.7 | 0.012 | 1.36 | 0.0 | 0.07 | 14.27 | 0.01 | 2.257 | 9.60 | 9.06 | 5.1 | 94.9 | 0.0 | -4.07 | 0.60 | 0.79 | 2.61 | 3.7 | 0.003 | 0.81 | 0.0 | 0.05 | 15.57 | 0.00 | 2.105 | 16.85 | 0.50 | 5.0 | 95.0 | 0.0 | -1.94 | 0.71 | 0.59 | 0.78 | 2.46 | 23080 | 3008 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6UWF | 20922 | 2023-08-09 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 16.40 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 15.31 | 0.00 | 2.245 | 6.57 | 0.62 | 3.1 | 96.9 | 0.0 | 1.17 | 1.10 | 0.67 | 0.85 | 2.62 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6LMU | 0920 | 2023-08-17 | 2019-12-26 | 3.4 | 3.65 | 3.35 | 3.7 | 0.010 | 1.16 | 0.0 | 0.06 | 16.07 | 0.01 | 2.320 | 5.34 | 1.50 | 10.7 | 89.3 | 0.0 | -5.98 | 0.66 | 0.73 | 2.00 | 3.6 | 0.004 | 0.81 | 0.0 | 0.04 | 16.49 | 0.00 | 2.231 | 11.17 | 0.55 | 8.0 | 92.0 | 0.0 | 0.05 | 0.58 | 0.59 | 0.73 | 1.17 | 22429 | 2893 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUH | 21913 | 2023-08-10 | 2020-05-04 | 3.4 | 3.72 | — | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 14.69 | 0.01 | 2.129 | 9.08 | 5.42 | 12.5 | 87.5 | 0.0 | -5.07 | 0.67 | 0.80 | 2.01 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 15.39 | 0.01 | 2.173 | 8.83 | 0.25 | 9.3 | 90.7 | 0.0 | -2.23 | 0.55 | 0.67 | 0.80 | 1.73 | 7790 | 1037 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C5V | 7344 | 2023-08-11 | 2018-01-16 | 4.8 | 4.87 | — | 4.8 | 0.013 | 1.30 | 0.0 | 0.07 | 9.99 | 0.01 | 2.307 | 0.95 | 0.43 | 2.4 | 97.3 | 0.3 | 0.06 | 0.83 | 0.78 | — | 4.8 | 0.004 | 0.71 | 0.0 | 0.04 | 12.63 | 0.00 | 2.042 | 13.75 | 0.00 | 3.9 | 96.1 | 0.0 | 0.23 | 0.94 | 0.84 | 0.81 | — | 10649 | 1353 | 9 | 0 | 14 | 0 | 0 | logfile |
✔ | 8EXS | 28661 | 2023-08-11 | 2022-10-25 | 4.3 | 3.73 | 4.19 | 3.8 | 0.020 | 1.72 | 0.0 | 0.10 | 10.18 | 0.01 | 1.722 | 4.78 | 0.58 | 3.4 | 96.6 | 0.0 | 0.10 | 0.55 | 0.48 | — | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 12.86 | 0.00 | 2.054 | 16.08 | 0.00 | 4.7 | 95.3 | 0.0 | 0.31 | 2.12 | 0.63 | 0.65 | — | 9320 | 1112 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8D64 | 27216 | 2023-08-12 | 2022-06-06 | 3.14 | 3.25 | 3.11 | 3.2 | 0.007 | 0.81 | 0.0 | 0.06 | 13.69 | 0.01 | 2.275 | 7.13 | 0.00 | 6.6 | 93.4 | 0.0 | -3.61 | 0.72 | 0.84 | 3.27 | 3.2 | 0.005 | 0.65 | 0.0 | 0.05 | 15.07 | 0.00 | 2.198 | 6.33 | 0.58 | 6.2 | 93.8 | 0.0 | -0.53 | 0.37 | 0.73 | 0.87 | 3.23 | 12545 | 1540 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2023-08-12 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RC8 | 4803 | 2023-08-18 | 2019-04-11 | 3.8 | 3.96 | — | 3.8 | 0.002 | 0.66 | 0.0 | 0.05 | 12.12 | 0.01 | 2.282 | 6.80 | 0.79 | 12.4 | 87.6 | 0.0 | -5.76 | 0.68 | 0.86 | 2.14 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 14.18 | 0.00 | 2.033 | 10.01 | 0.47 | 10.4 | 89.6 | 0.0 | -2.88 | 0.62 | 0.69 | 0.87 | 1.59 | 130152 | 16872 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE5 | 0210 | 2023-08-18 | 2018-08-20 | 4.12 | 4.16 | — | 4.2 | 0.036 | 3.51 | 183.0 | 0.20 | 17.65 | 0.03 | 2.236 | 2.09 | 4.51 | 5.3 | 92.5 | 2.2 | -2.68 | 0.54 | 0.60 | — | 4.1 | 0.005 | 0.88 | 0.0 | 0.05 | 14.49 | 0.00 | 2.074 | 22.24 | 0.00 | 4.4 | 95.4 | 0.2 | -0.85 | 1.76 | 0.58 | 0.76 | — | 24633 | 3162 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y5K | 10700 | 2023-08-11 | 2020-02-25 | 4.2 | 4.47 | 4.20 | 4.2 | 0.004 | 0.76 | 0.0 | 0.05 | 12.98 | 0.00 | 2.096 | 10.42 | 0.00 | 2.6 | 97.4 | 0.0 | -1.98 | 0.86 | 0.76 | — | 4.2 | 0.003 | 0.70 | 0.0 | 0.05 | 12.88 | 0.00 | 2.113 | 15.93 | 0.00 | 3.1 | 96.9 | 0.0 | 0.21 | 1.01 | 0.87 | 0.79 | — | 10614 | 1335 | 9 | 0 | 6 | 0 | 0 | logfile |
✔ | 7KJR | 22898 | 2023-08-09 | 2020-10-26 | 2.08 | 2.52 | 2.15 | 2.4 | 0.006 | 0.84 | 0.0 | 0.05 | 16.31 | 0.00 | 2.254 | 7.60 | 0.25 | 1.8 | 98.2 | 0.0 | 1.13 | 0.68 | 0.87 | 5.29 | 2.4 | 0.003 | 0.53 | 0.0 | 0.04 | 16.24 | 0.00 | 2.088 | 9.90 | 0.99 | 2.1 | 97.9 | 0.0 | 1.24 | 0.40 | 0.66 | 0.87 | 4.76 | 3840 | 448 | 8 | 0 | 2 | 122 | 0 | logfile |
✔ | 6JT2 | 9885 | 2023-08-10 | 2019-04-08 | 3.8 | 3.88 | — | 3.8 | 0.004 | 0.74 | 0.0 | 0.04 | 11.14 | 0.01 | 1.980 | 10.08 | 3.54 | 4.0 | 95.7 | 0.3 | -2.54 | 0.80 | 0.80 | 2.23 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 13.57 | 0.00 | 1.319 | 10.96 | 0.12 | 3.7 | 96.3 | 0.0 | -0.17 | 1.66 | 0.82 | 0.81 | 1.64 | 8191 | 1075 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 6RAJ | 4777 | 2023-08-11 | 2019-04-06 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10198 | 1282 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7EGH | 31117 | 2023-08-16 | 2021-03-24 | 3.04 | 3.28 | — | 3.2 | 0.009 | 1.21 | 16.0 | 0.09 | 18.58 | 0.01 | 2.206 | 8.25 | 5.07 | 4.3 | 95.6 | 0.1 | -2.18 | 0.67 | 0.63 | 3.18 | 3.2 | 0.005 | 0.64 | 0.0 | 0.04 | 18.98 | 0.00 | 2.088 | 9.47 | 0.44 | 4.3 | 95.7 | 0.0 | 0.54 | 0.65 | 0.81 | 0.86 | 2.83 | 20543 | 2336 | 8 | 90 | 0 | 0 | 0 | logfile |
✔ | 6N7W | 0365 | 2023-08-10 | 2018-11-28 | 4.5 | 4.41 | — | 4.1 | 0.006 | 0.75 | 0.0 | 0.05 | 19.17 | 0.02 | 2.125 | 3.09 | 0.46 | 4.4 | 95.5 | 0.1 | -2.55 | 0.85 | 0.81 | — | 4.1 | 0.004 | 0.62 | 0.0 | 0.04 | 19.57 | 0.00 | 1.972 | 13.04 | 0.00 | 5.0 | 95.0 | 0.0 | 1.12 | 1.92 | 0.87 | 0.84 | — | 7837 | 808 | 5 | 70 | 2 | 0 | 0 | logfile |
✔ | 7EG4 | 31105 | 2023-08-14 | 2021-03-24 | 3.2 | 3.21 | — | 3.3 | 0.008 | 0.70 | 0.0 | 0.04 | 14.25 | 0.00 | 1.920 | 16.93 | 0.12 | 12.9 | 87.1 | 0.0 | -3.12 | 0.78 | 0.84 | 3.02 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.85 | 0.00 | 2.014 | 6.98 | 0.12 | 8.9 | 91.1 | 0.0 | -0.09 | 0.49 | 0.76 | 0.83 | 2.45 | 15258 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 5MKF | 3524 | 2023-08-14 | 2016-12-04 | 4.2 | 4.33 | — | 4.3 | 0.010 | 1.12 | 8.0 | 0.07 | 12.75 | 0.01 | 1.989 | 33.58 | 0.52 | 11.7 | 87.5 | 0.8 | -5.40 | 0.68 | 0.70 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.05 | 13.94 | 0.00 | 2.090 | 16.27 | 0.23 | 6.4 | 93.4 | 0.2 | -2.33 | 1.38 | 0.69 | 0.77 | — | 16620 | 1932 | 12 | 0 | 41 | 0 | 0 | logfile |
✔ | 7EG1 | 31104 | 2023-08-14 | 2021-03-23 | 3.2 | 3.30 | — | 3.3 | 0.006 | 0.65 | 0.0 | 0.04 | 14.25 | 0.01 | 2.026 | 16.04 | 0.36 | 11.9 | 88.0 | 0.1 | -5.05 | 0.81 | 0.86 | 3.43 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 15.42 | 0.00 | 2.061 | 5.50 | 0.12 | 9.2 | 90.8 | 0.0 | -0.13 | 1.18 | 0.81 | 0.87 | 2.93 | 15260 | 1878 | 8 | 0 | 8 | 0 | 0 | logfile |