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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CP6 | 7548 | 2023-08-24 | 2018-03-13 | 3.6 | 3.73 | — | 3.6 | 0.007 | 1.09 | 0.0 | 0.05 | 10.80 | 0.01 | 2.196 | 10.99 | 0.66 | 5.5 | 94.2 | 0.3 | -3.06 | 0.75 | 0.74 | 1.64 | 3.6 | 0.003 | 0.73 | 0.0 | 0.04 | 14.48 | 0.00 | 2.158 | 14.13 | 0.27 | 3.8 | 96.2 | 0.1 | 0.08 | 1.52 | 0.78 | 0.80 | 1.37 | 38853 | 5128 | 32 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MFG | 23816 | 2023-08-14 | 2021-04-09 | 3.87 | 4.47 | 3.92 | 4.0 | 0.003 | 0.47 | 0.0 | 0.04 | 9.45 | 0.00 | 1.993 | 5.42 | 0.22 | 4.2 | 95.8 | 0.0 | 0.42 | 0.86 | 0.84 | 2.35 | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 13.11 | 0.00 | 2.049 | 11.37 | 0.55 | 6.1 | 93.9 | 0.0 | -0.24 | 1.25 | 0.87 | 0.86 | 2.06 | 17013 | 2121 | 18 | 0 | 30 | 0 | 0 | logfile |
✔ | 6YUZ | 10936 | 2023-08-11 | 2020-04-27 | 2.8 | 2.85 | 2.72 | 2.9 | 0.006 | 0.58 | 1.0 | 0.05 | 13.44 | 0.00 | 2.235 | 6.04 | 2.33 | 3.8 | 95.9 | 0.3 | -3.67 | 0.66 | 0.85 | 3.38 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.01 | 0.00 | 2.220 | 7.40 | 2.33 | 5.3 | 94.5 | 0.2 | -0.73 | 1.83 | 0.67 | 0.91 | 3.87 | 9782 | 1188 | 4 | 0 | 10 | 0 | 0 | logfile |
✔ | 7V7G | 31770 | 2023-08-18 | 2021-08-21 | 3.1 | 3.93 | — | 3.3 | 0.004 | 0.62 | 0.0 | 0.05 | 13.88 | 0.00 | 2.168 | 7.85 | 0.04 | 5.6 | 94.3 | 0.1 | -0.14 | 0.87 | 0.85 | 2.49 | 3.3 | 0.006 | 0.65 | 0.0 | 0.05 | 15.35 | 0.00 | 2.138 | 9.92 | 0.04 | 6.7 | 93.2 | 0.1 | -0.30 | 1.14 | 0.88 | 0.86 | 2.09 | 25461 | 3114 | 39 | 0 | 81 | 0 | 0 | logfile |
✔ | 7V7E | 31768 | 2023-08-18 | 2021-08-21 | 2.9 | 3.84 | — | 3.2 | 0.004 | 0.62 | 0.0 | 0.05 | 13.63 | 0.00 | 2.106 | 7.79 | 0.00 | 5.0 | 95.0 | 0.1 | -0.18 | 0.87 | 0.84 | 2.51 | 3.3 | 0.006 | 0.67 | 0.0 | 0.05 | 15.15 | 0.00 | 2.133 | 9.41 | 1.66 | 5.8 | 94.1 | 0.1 | -0.33 | 1.14 | 0.87 | 0.85 | 2.15 | 25340 | 3093 | 40 | 0 | 82 | 0 | 0 | logfile |
✔ | 7FAS | 31505 | 2023-08-11 | 2021-07-07 | 3.6 | 2.95 | — | 3.7 | 0.002 | 0.52 | 0.0 | 0.04 | 15.63 | 0.00 | 2.193 | 9.10 | 0.09 | 4.1 | 95.9 | 0.0 | 0.85 | 0.72 | 0.73 | 0.88 | 3.7 | 0.003 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.192 | 9.70 | 0.18 | 4.1 | 95.9 | 0.0 | 1.07 | 0.43 | 0.73 | 0.75 | 0.97 | 10173 | 1229 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7D4G | 30573 | 2023-08-09 | 2020-09-23 | 3.9 | 4.13 | — | 4.1 | 0.006 | 1.06 | 1.0 | 0.06 | 9.87 | 0.01 | 1.917 | 36.47 | 0.00 | 10.7 | 88.9 | 0.4 | -3.84 | 0.56 | 0.52 | 1.34 | 4.1 | 0.004 | 0.90 | 0.0 | 0.05 | 15.16 | 0.01 | 2.196 | 21.81 | 1.39 | 12.3 | 87.4 | 0.2 | -2.19 | 3.65 | 0.65 | 0.71 | 1.77 | 3925 | 502 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WoU | 32659 | 2023-08-21 | 2022-01-22 | 3.47 | 2.44 | — | 2.1 | 0.003 | 0.57 | 0.0 | 0.04 | 9.55 | 0.01 | 2.208 | 8.19 | 5.49 | 8.0 | 92.0 | 0.0 | -4.25 | 0.67 | 0.67 | 2.06 | 2.2 | 0.008 | 0.83 | 0.0 | 0.05 | 13.68 | 0.01 | 2.036 | 13.45 | 0.73 | 11.6 | 88.4 | 0.0 | -2.56 | 1.29 | 0.70 | 0.74 | 2.22 | 31397 | 4029 | 10 | 0 | 23 | 0 | 0 | logfile |
✔ | 7V82 | 31787 | 2023-08-25 | 2021-08-22 | 2.8 | 3.88 | — | 3.0 | 0.005 | 0.62 | 0.0 | 0.05 | 14.02 | 0.00 | 2.150 | 10.11 | 0.00 | 5.1 | 94.9 | 0.0 | -0.41 | 0.84 | 0.78 | 1.93 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.36 | 0.00 | 2.176 | 9.60 | 0.81 | 5.0 | 95.0 | 0.0 | -0.04 | 0.32 | 0.87 | 0.83 | 1.62 | 40092 | 4902 | 39 | 0 | 84 | 0 | 0 | logfile |
✔ | 7F63 | 31471 | 2023-08-09 | 2021-06-24 | 3.9 | 4.20 | — | 4.0 | 0.002 | 0.58 | 0.0 | 0.04 | 13.34 | 0.00 | 2.136 | 12.60 | 0.00 | 8.3 | 91.4 | 0.2 | -2.31 | 0.63 | 0.62 | 1.27 | 4.0 | 0.003 | 0.85 | 0.0 | 0.05 | 15.96 | 0.00 | 2.134 | 18.07 | 0.54 | 10.0 | 89.5 | 0.5 | -2.84 | 1.79 | 0.65 | 0.69 | 1.81 | 3375 | 429 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SN7 | 25213 | 2023-08-22 | 2021-10-27 | 4.2 | 4.22 | — | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.41 | 0.00 | 2.099 | 13.03 | 0.07 | 8.3 | 91.7 | 0.0 | 0.65 | 0.47 | 0.76 | — | 4.1 | 0.005 | 0.73 | 0.0 | 0.04 | 13.97 | 0.00 | 2.028 | 15.39 | 0.05 | 10.2 | 89.8 | 0.0 | 0.04 | 0.66 | 0.49 | 0.79 | — | 90482 | 12558 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 7STE | 25426 | 2023-08-20 | 2021-11-12 | 2.73 | 3.42 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 13.77 | 0.00 | 2.030 | 3.56 | 0.00 | 2.0 | 98.0 | 0.0 | 3.20 | 0.82 | 0.83 | 2.63 | 3.2 | 0.004 | 0.57 | 0.0 | 0.04 | 15.55 | 0.00 | 1.926 | 6.48 | 0.44 | 2.5 | 97.5 | 0.0 | 2.66 | 1.19 | 0.81 | 0.87 | 3.06 | 28628 | 1774 | 10 | 0 | 6 | 0 | 14379 | logfile |
✔ | 7RPH | 24614 | 2023-08-10 | 2021-08-03 | 2.5 | 2.68 | 2.59 | 2.7 | 0.017 | 1.89 | 4.0 | 0.12 | 14.72 | 0.01 | 1.952 | 2.03 | 0.61 | 2.1 | 97.9 | 0.0 | -0.70 | 0.53 | 0.76 | 4.93 | 2.7 | 0.002 | 0.63 | 0.0 | 0.04 | 16.11 | 0.00 | 2.195 | 6.19 | 2.21 | 1.6 | 98.4 | 0.0 | 2.13 | 1.30 | 0.66 | 0.85 | 3.03 | 8573 | 926 | 1 | 0 | 36 | 86 | 0 | logfile |
✔ | 7UNM | 26627 | 2023-08-12 | 2022-04-11 | 2.61 | 3.48 | 2.66 | 3.3 | 0.002 | 0.43 | 0.0 | 0.04 | 11.23 | 0.00 | 2.087 | 3.44 | 0.00 | 0.5 | 99.5 | 0.0 | 3.34 | 0.67 | 0.82 | 2.41 | 3.3 | 0.004 | 0.53 | 0.0 | 0.04 | 14.40 | 0.00 | 1.941 | 4.47 | 0.48 | 2.1 | 97.9 | 0.0 | 4.10 | 0.81 | 0.56 | 0.79 | 1.79 | 11694 | 736 | 6 | 0 | 5 | 55 | 5920 | logfile |
✔ | 7LiS | 23384 | 2023-08-18 | 2021-01-27 | 2.96 | 3.25 | — | 3.2 | 0.008 | 0.79 | 0.0 | 0.06 | 14.46 | 0.00 | 2.214 | 2.81 | 3.45 | 3.5 | 96.5 | 0.0 | 0.22 | 0.75 | 0.88 | 4.54 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.57 | 0.00 | 2.171 | 3.00 | 1.80 | 3.1 | 96.9 | 0.0 | 0.66 | 0.34 | 0.77 | 0.89 | 3.19 | 128880 | 15660 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 5FTK | 3296 | 2023-08-22 | 2016-01-14 | 2.4 | 2.04 | — | 2.0 | 0.011 | 1.39 | 0.0 | 0.07 | 12.31 | 0.01 | 2.216 | 25.01 | 0.65 | 6.1 | 93.5 | 0.4 | -4.37 | 0.44 | 0.66 | 3.22 | 2.0 | 0.004 | 0.86 | 0.0 | 0.05 | 17.78 | 0.01 | 2.112 | 16.73 | 4.31 | 8.6 | 91.3 | 0.1 | -1.98 | 1.25 | 0.50 | 0.70 | 1.75 | 34374 | 4338 | 18 | 0 | 12 | 96 | 0 | logfile |
✔ | 7DSi | 30834 | 2023-08-12 | 2020-12-31 | 3.21 | 3.61 | — | 3.5 | 0.006 | 1.05 | 0.0 | 0.06 | 11.14 | 0.01 | 2.215 | 5.08 | 0.15 | 8.3 | 91.7 | 0.1 | -5.64 | 0.75 | 0.79 | 3.66 | 3.5 | 0.005 | 0.72 | 0.0 | 0.05 | 13.91 | 0.00 | 2.071 | 9.62 | 0.31 | 7.1 | 92.8 | 0.1 | -2.37 | 0.57 | 0.73 | 0.83 | 2.73 | 12185 | 1507 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 6M23 | 30061 | 2023-08-13 | 2020-02-26 | 3.2 | 3.49 | — | 3.3 | 0.010 | 1.12 | 0.0 | 0.07 | 14.88 | 0.01 | 2.216 | 8.07 | 2.32 | 10.7 | 87.8 | 1.5 | -6.36 | 0.68 | 0.79 | 2.75 | 3.4 | 0.003 | 0.77 | 0.0 | 0.04 | 15.78 | 0.00 | 2.138 | 7.67 | 0.13 | 10.3 | 89.2 | 0.4 | -1.39 | 0.76 | 0.67 | 0.83 | 2.18 | 14744 | 1872 | 12 | 0 | 18 | 2 | 0 | logfile |
✘ | 7Z18 | 14444 | 2023-08-24 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.02 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✘ | 8FAZ | 28961 | 2023-08-10 | 2022-11-29 | 2.3 | 2.71 | 2.34 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 10.77 | 0.00 | 1.986 | 10.57 | 0.50 | 2.7 | 97.3 | 0.0 | 0.35 | 0.83 | 0.81 | 3.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7331 | 926 | 7 | 0 | 5 | 0 | 0 | logfile |