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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MGM | 23829 | 2023-08-18 | 2021-04-12 | 3.1 | 3.35 | 3.11 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 14.02 | 0.00 | 1.874 | 5.80 | 0.04 | 2.4 | 97.6 | 0.0 | 0.78 | 0.87 | 0.89 | 2.62 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 14.91 | 0.00 | 1.983 | 5.55 | 0.07 | 1.9 | 98.1 | 0.0 | 1.60 | 0.21 | 0.87 | 0.90 | 2.28 | 24079 | 2964 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6XKY | 22229 | 2023-08-24 | 2020-06-27 | 3.2 | 3.13 | 3.17 | 3.2 | 0.006 | 0.55 | 0.0 | 0.03 | 10.04 | 0.00 | 1.588 | 4.66 | 0.48 | 1.5 | 98.5 | 0.0 | 2.67 | 0.52 | 0.87 | 2.05 | 3.2 | 0.003 | 0.45 | 0.0 | 0.03 | 14.13 | 0.00 | 2.133 | 5.05 | 0.36 | 1.8 | 98.2 | 0.0 | 3.93 | 0.51 | 0.52 | 0.88 | 1.63 | 38760 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PXE | 13700 | 2023-08-20 | 2021-10-08 | 2.38 | 2.90 | 2.41 | 2.7 | 0.005 | 0.73 | 0.0 | 0.04 | 16.55 | 0.00 | 2.151 | 5.31 | 1.94 | 1.0 | 99.0 | 0.0 | 1.17 | 0.79 | 0.87 | 3.74 | 2.7 | 0.002 | 0.45 | 0.0 | 0.04 | 16.00 | 0.00 | 2.170 | 4.81 | 2.07 | 1.4 | 98.6 | 0.0 | 1.73 | 0.33 | 0.79 | 0.89 | 4.13 | 28928 | 3540 | 12 | 0 | 36 | 136 | 0 | logfile |
✔ | 7UB0 | 26433 | 2023-08-18 | 2022-03-14 | 3.31 | 3.57 | 3.27 | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 13.20 | 0.00 | 2.205 | 4.98 | 0.04 | 2.0 | 98.0 | 0.0 | -0.12 | 0.85 | 0.86 | 3.45 | 3.4 | 0.002 | 0.45 | 0.0 | 0.04 | 14.11 | 0.00 | 2.193 | 4.96 | 0.07 | 2.1 | 97.9 | 0.0 | 0.59 | 0.22 | 0.86 | 0.87 | 3.21 | 24993 | 3109 | 16 | 0 | 50 | 0 | 0 | logfile |
✔ | 7XNH | 33315 | 2023-08-15 | 2022-04-28 | 3.1 | 2.98 | 2.73 | 2.9 | 0.006 | 1.12 | 0.0 | 0.05 | 13.57 | 0.01 | 2.144 | 6.68 | 0.61 | 0.6 | 99.4 | 0.0 | -0.23 | 0.72 | 0.87 | 4.77 | 2.9 | 0.002 | 0.45 | 0.0 | 0.04 | 13.55 | 0.00 | 2.333 | 4.76 | 0.15 | 0.8 | 99.2 | 0.0 | 2.76 | 0.97 | 0.73 | 0.84 | 3.00 | 19224 | 2172 | 24 | 0 | 132 | 0 | 0 | logfile |
✔ | 7oRK | 13040 | 2023-08-15 | 2021-06-06 | 3.1 | 3.05 | — | 3.1 | 0.007 | 0.79 | 2.0 | 0.05 | 13.44 | 0.00 | 1.996 | 5.31 | 1.04 | 3.2 | 96.8 | 0.0 | 0.32 | 0.83 | 0.89 | 4.27 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 14.54 | 0.00 | 2.001 | 5.72 | 0.10 | 2.6 | 97.4 | 0.0 | 1.11 | 0.72 | 0.83 | 0.90 | 3.94 | 18699 | 2182 | 7 | 36 | 5 | 48 | 0 | logfile |
✔ | 7TC7 | 25804 | 2023-08-16 | 2021-12-23 | 2.9 | 2.75 | — | 2.9 | 0.007 | 0.58 | 0.0 | 0.04 | 13.89 | 0.00 | 1.792 | 14.53 | 0.17 | 2.3 | 97.7 | 0.0 | 1.00 | 0.72 | 0.86 | 4.97 | 2.9 | 0.003 | 0.45 | 0.0 | 0.04 | 15.84 | 0.00 | 1.868 | 14.91 | 0.79 | 2.2 | 97.8 | 0.0 | 1.54 | 1.09 | 0.73 | 0.87 | 4.39 | 20567 | 2113 | 8 | 0 | 4 | 0 | 3200 | logfile |
✔ | 7RQU | 24636 | 2023-08-23 | 2021-08-08 | 3.05 | 3.32 | — | 3.3 | 0.012 | 1.15 | 0.0 | 0.06 | 17.86 | 0.00 | 2.334 | 3.79 | 0.00 | 3.2 | 96.8 | 0.0 | 1.69 | 0.63 | 0.76 | 2.73 | 3.3 | 0.003 | 0.45 | 0.0 | 0.03 | 15.71 | 0.00 | 2.351 | 3.30 | 0.42 | 3.7 | 96.3 | 0.0 | 1.99 | 0.26 | 0.64 | 0.80 | 2.66 | 35602 | 2416 | 8 | 0 | 38 | 0 | 16568 | logfile |
✔ | 8EL8 | 28224 | 2023-08-09 | 2022-09-23 | 3.2 | 3.53 | 3.33 | 3.5 | 0.007 | 0.70 | 0.0 | 0.04 | 13.20 | 0.00 | 2.403 | 2.38 | 0.00 | 1.7 | 98.3 | 0.0 | 0.75 | 0.66 | 0.85 | 2.31 | 3.5 | 0.003 | 0.45 | 0.0 | 0.04 | 15.16 | 0.00 | 2.353 | 2.27 | 0.00 | 2.4 | 97.6 | 0.0 | 1.11 | 0.26 | 0.67 | 0.85 | 2.07 | 4467 | 597 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FA2 | 28948 | 2023-08-09 | 2022-11-25 | 2.82 | 2.48 | 3.15 | 2.1 | 0.006 | 0.55 | 0.0 | 0.04 | 13.54 | 0.00 | 2.297 | 6.56 | 0.00 | 1.8 | 98.2 | 0.0 | -0.12 | 0.76 | 0.79 | 0.72 | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 14.46 | 0.00 | 2.218 | 8.87 | 0.67 | 0.0 | 100.0 | 0.0 | 5.30 | 0.38 | 0.76 | 0.79 | 0.78 | 2577 | 342 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oNJ | 12996 | 2023-08-14 | 2021-05-25 | 2.3 | 2.52 | 2.24 | 2.5 | 0.009 | 0.86 | 0.0 | 0.05 | 18.33 | 0.00 | 2.155 | 8.48 | 0.47 | 0.8 | 99.2 | 0.0 | -0.25 | 0.76 | 0.88 | 5.16 | 2.5 | 0.002 | 0.46 | 0.0 | 0.04 | 18.08 | 0.00 | 2.173 | 8.46 | 0.61 | 0.8 | 99.2 | 0.0 | 2.22 | 1.14 | 0.75 | 0.89 | 4.38 | 16947 | 1834 | 21 | 0 | 63 | 266 | 0 | logfile |
✔ | 8EL7 | 28223 | 2023-08-09 | 2022-09-23 | 2.8 | 3.11 | 2.95 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 13.13 | 0.00 | 2.295 | 2.43 | 0.00 | 1.7 | 98.3 | 0.0 | 0.97 | 0.57 | 0.80 | 2.31 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 14.99 | 0.00 | 2.314 | 1.88 | 1.74 | 2.2 | 97.8 | 0.0 | 0.68 | 0.27 | 0.58 | 0.81 | 2.13 | 4562 | 604 | 2 | 0 | 0 | 5 | 0 | logfile |
✔ | 8ALY | 15520 | 2023-08-19 | 2022-08-01 | 2.98 | 3.34 | — | 3.3 | 0.005 | 0.61 | 0.0 | 0.04 | 16.13 | 0.00 | 2.108 | 5.86 | 0.36 | 4.7 | 95.3 | 0.0 | -1.52 | 0.75 | 0.86 | 3.87 | 3.3 | 0.002 | 0.46 | 0.0 | 0.04 | 17.31 | 0.00 | 1.928 | 5.43 | 1.74 | 3.3 | 96.7 | 0.0 | -0.10 | 1.10 | 0.72 | 0.86 | 3.52 | 41300 | 5180 | 40 | 0 | 20 | 0 | 0 | logfile |
✔ | 6MRU | 9213 | 2023-08-10 | 2018-10-15 | 3.2 | 3.31 | — | 3.3 | 0.005 | 0.73 | 0.0 | 0.04 | 10.16 | 0.01 | 2.297 | 2.27 | 0.82 | 1.4 | 98.6 | 0.0 | -1.59 | 0.72 | 0.83 | 3.34 | 3.3 | 0.002 | 0.46 | 0.0 | 0.03 | 13.25 | 0.00 | 2.193 | 3.51 | 0.00 | 0.6 | 99.4 | 0.0 | 5.67 | 3.08 | 0.76 | 0.87 | 1.78 | 29107 | 3705 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZiR | 14738 | 2023-08-09 | 2022-04-08 | 2.5 | 2.51 | 2.04 | 2.7 | 0.002 | 0.34 | 0.0 | 0.03 | 9.02 | 0.00 | 2.317 | 1.65 | 0.00 | 2.0 | 98.0 | 0.0 | -3.82 | 0.48 | 0.90 | 7.46 | 2.7 | 0.003 | 0.46 | 0.0 | 0.04 | 12.12 | 0.00 | 2.316 | 0.28 | 0.00 | 2.9 | 97.1 | 0.0 | -3.83 | 1.03 | 0.50 | 0.93 | 7.96 | 2120 | 255 | 10 | 0 | 0 | 50 | 0 | logfile |
✔ | 6U5N | 20650 | 2023-08-13 | 2019-08-28 | 3.2 | 3.32 | — | 3.3 | 0.006 | 0.76 | 0.0 | 0.05 | 14.13 | 0.01 | 1.907 | 2.80 | 0.15 | 4.8 | 95.2 | 0.0 | -3.09 | 0.72 | 0.84 | 2.62 | 3.3 | 0.002 | 0.46 | 0.0 | 0.05 | 15.73 | 0.00 | 2.145 | 5.34 | 0.44 | 2.3 | 97.7 | 0.0 | 0.97 | 1.21 | 0.67 | 0.84 | 2.00 | 13262 | 1776 | 24 | 0 | 24 | 8 | 0 | logfile |
✔ | 8DNX | 27583 | 2023-08-09 | 2022-07-12 | 2.98 | 3.62 | 2.98 | 3.5 | 0.008 | 0.65 | 0.0 | 0.04 | 12.58 | 0.00 | 2.185 | 6.67 | 0.44 | 2.6 | 97.4 | 0.0 | 1.89 | 0.56 | 0.79 | 2.16 | 3.5 | 0.003 | 0.46 | 0.0 | 0.04 | 15.47 | 0.00 | 2.042 | 29.67 | 1.54 | 2.8 | 97.2 | 0.0 | 4.07 | 0.69 | 0.50 | 0.77 | 2.30 | 4291 | 549 | 4 | 0 | 1 | 0 | 20 | logfile |
✔ | 6ZBL | 11157 | 2023-08-24 | 2020-06-08 | 3.6 | 4.39 | 3.70 | 4.0 | 0.014 | 1.20 | 0.0 | 0.07 | 14.69 | 0.01 | 2.400 | 1.54 | 0.00 | 0.7 | 99.3 | 0.0 | -0.56 | 0.87 | 0.79 | 1.33 | 4.0 | 0.002 | 0.46 | 0.0 | 0.03 | 15.45 | 0.00 | 2.035 | 3.28 | 0.00 | 1.0 | 99.0 | 0.0 | 4.27 | 1.71 | 0.88 | 0.82 | 1.00 | 39074 | 2326 | 4 | 0 | 0 | 0 | 19788 | logfile |
✔ | 8EoB | 28333 | 2023-08-11 | 2022-10-02 | 3.1 | 3.53 | 3.19 | 3.4 | 0.005 | 0.61 | 0.0 | 0.04 | 11.24 | 0.00 | 1.945 | 7.00 | 1.78 | 2.6 | 97.4 | 0.0 | 0.42 | 0.76 | 0.84 | 3.12 | 3.4 | 0.002 | 0.46 | 0.0 | 0.04 | 13.80 | 0.00 | 2.018 | 6.55 | 0.00 | 2.3 | 97.7 | 0.0 | 0.85 | 0.55 | 0.75 | 0.83 | 2.59 | 10141 | 1245 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8AXV | 15704 | 2023-08-25 | 2022-09-01 | 2.8 | 2.95 | 2.82 | 2.9 | 0.007 | 0.57 | 0.0 | 0.04 | 17.87 | 0.00 | 1.948 | 41.20 | 2.35 | 4.9 | 95.1 | 0.0 | -0.64 | 0.70 | 0.74 | 2.08 | 2.9 | 0.002 | 0.46 | 0.0 | 0.04 | 18.01 | 0.00 | 1.928 | 43.19 | 4.05 | 4.6 | 95.4 | 0.0 | 0.09 | 0.52 | 0.73 | 0.80 | 2.32 | 40380 | 5148 | 24 | 0 | 24 | 0 | 108 | logfile |