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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8GVA | 34289 | 2023-08-10 | 2022-09-14 | 3.25 | 3.43 | 3.24 | 3.4 | 0.004 | 0.68 | 0.0 | 0.04 | 14.13 | 0.00 | 2.259 | 5.49 | 0.00 | 5.6 | 94.4 | 0.0 | -0.61 | 0.64 | 0.81 | 2.22 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 16.23 | 0.00 | 2.197 | 5.86 | 0.23 | 4.9 | 95.1 | 0.0 | 0.93 | 0.37 | 0.61 | 0.81 | 1.42 | 8072 | 1022 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M6S | 23706 | 2023-08-13 | 2021-03-26 | 3.61 | 4.62 | 3.61 | 3.9 | 0.008 | 1.49 | 0.0 | 0.09 | 12.34 | 0.01 | 2.269 | 6.38 | 0.00 | 3.1 | 96.9 | 0.0 | 1.92 | 0.87 | 0.78 | 1.08 | 3.9 | 0.003 | 0.84 | 0.0 | 0.05 | 15.03 | 0.00 | 2.190 | 15.35 | 0.25 | 3.5 | 96.5 | 0.0 | 0.25 | 1.42 | 0.89 | 0.83 | 0.85 | 14625 | 1790 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7URD | 26709 | 2023-08-09 | 2022-04-21 | 2.92 | 3.41 | 2.97 | 3.3 | 0.017 | 0.95 | 0.0 | 0.83 | 13.69 | 0.00 | 2.177 | 10.24 | 0.00 | 5.0 | 95.0 | 0.0 | -2.44 | 0.59 | 0.86 | 3.86 | 3.3 | 0.003 | 1.09 | 0.0 | 0.12 | 15.85 | 0.00 | 2.257 | 6.31 | 0.52 | 3.5 | 96.5 | 0.0 | 0.73 | 0.96 | 0.55 | 0.85 | 3.32 | 5534 | 678 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 7W2J | 32262 | 2023-08-14 | 2021-11-24 | 3.6 | 2.90 | — | 3.6 | 0.030 | 1.49 | 0.0 | 0.56 | 15.43 | 0.01 | 2.011 | 18.00 | 0.00 | 11.0 | 88.7 | 0.4 | -2.64 | 0.65 | 0.79 | 1.96 | 3.6 | 0.004 | 1.13 | 0.0 | 0.06 | 16.76 | 0.00 | 1.809 | 12.79 | 0.65 | 5.4 | 94.4 | 0.2 | -0.75 | 0.37 | 0.63 | 0.76 | 1.48 | 16522 | 2104 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7SQ8 | 25379 | 2023-08-13 | 2021-11-04 | 2.598 | 2.10 | — | 2.5 | 0.004 | 0.55 | 0.0 | 0.04 | 13.37 | 0.00 | 2.199 | 3.68 | 0.00 | 3.3 | 96.7 | 0.0 | 1.93 | 0.64 | 0.86 | 4.26 | 2.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.53 | 0.00 | 2.225 | 4.23 | 1.39 | 2.7 | 97.3 | 0.0 | 2.27 | 0.38 | 0.64 | 0.88 | 4.02 | 15117 | 1852 | 13 | 0 | 9 | 8 | 0 | logfile |
✔ | 6VMS | 21243 | 2023-08-11 | 2020-01-28 | 3.8 | 3.48 | — | 3.7 | 0.013 | 0.83 | 0.0 | 0.04 | 10.98 | 0.00 | 2.082 | 5.72 | 0.00 | 2.3 | 97.7 | 0.0 | -0.27 | 0.57 | 0.71 | 1.53 | 3.6 | 0.004 | 0.78 | 0.0 | 0.05 | 15.61 | 0.00 | 2.104 | 14.40 | 0.31 | 3.8 | 96.2 | 0.0 | 0.31 | 1.31 | 0.65 | 0.83 | 2.16 | 8953 | 1135 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8H1T | 34431 | 2023-08-15 | 2022-10-04 | 3.0 | 3.40 | 1.70 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 24.67 | 0.00 | 1.336 | 10.82 | 0.00 | 2.2 | 97.8 | 0.0 | 2.26 | 0.72 | 0.67 | 1.40 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 26.64 | 0.00 | 2.181 | 11.69 | 2.94 | 3.4 | 96.6 | 0.0 | 1.61 | 0.68 | 0.76 | 0.74 | 1.42 | 17365 | 1323 | 14 | 334 | 0 | 0 | 0 | logfile |
✔ | 7YG4 | 33807 | 2023-08-10 | 2022-07-11 | 3.1 | 3.38 | 3.15 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 15.98 | 0.00 | 2.147 | 7.09 | 0.00 | 3.3 | 96.7 | 0.0 | 0.41 | 0.75 | 0.81 | 1.84 | 3.3 | 0.002 | 0.57 | 0.0 | 0.03 | 17.05 | 0.00 | 2.235 | 6.89 | 0.00 | 3.3 | 96.7 | 0.0 | 2.29 | 0.36 | 0.75 | 0.81 | 0.84 | 7510 | 953 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZRV | 14922 | 2023-08-19 | 2022-05-05 | 2.8 | 3.68 | 3.14 | 3.4 | 0.004 | 0.63 | 0.0 | 0.05 | 13.45 | 0.00 | 2.089 | 9.52 | 0.00 | 4.7 | 95.1 | 0.2 | -0.19 | 0.79 | 0.82 | 2.37 | 3.4 | 0.003 | 0.65 | 0.0 | 0.05 | 15.13 | 0.00 | 2.110 | 11.44 | 1.51 | 5.4 | 94.4 | 0.1 | -0.33 | 0.43 | 0.75 | 0.80 | 2.16 | 28055 | 3429 | 38 | 0 | 88 | 0 | 0 | logfile |
✔ | 8EA0 | 27970 | 2023-08-09 | 2022-08-27 | 2.56 | 2.05 | 2.66 | 1.9 | 0.003 | 0.55 | 0.0 | 0.04 | 12.24 | 0.00 | 2.237 | 8.88 | 0.00 | 4.3 | 95.7 | 0.0 | -0.24 | 0.72 | 0.77 | 2.21 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.18 | 0.00 | 2.051 | 8.02 | 0.84 | 5.3 | 94.7 | 0.0 | 1.64 | 0.46 | 0.74 | 0.80 | 3.17 | 2286 | 285 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WSQ | 32764 | 2023-08-14 | 2022-02-01 | 3.8 | 3.52 | — | 3.9 | 0.038 | 1.52 | 0.0 | 0.45 | 14.52 | 0.01 | 1.827 | 11.77 | 0.00 | 4.9 | 95.1 | 0.0 | -0.66 | 0.68 | 0.75 | 1.94 | 3.8 | 0.004 | 1.12 | 0.0 | 0.06 | 16.17 | 0.00 | 1.249 | 15.32 | 0.76 | 5.6 | 94.4 | 0.0 | -0.58 | 1.29 | 0.69 | 0.77 | 1.78 | 16522 | 2104 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7V9U | 31827 | 2023-08-11 | 2021-08-26 | 3.12 | 3.31 | — | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 22.35 | 0.01 | 2.180 | 10.84 | 0.00 | 6.2 | 93.8 | 0.0 | -1.53 | 0.75 | 0.78 | 3.58 | 3.2 | 0.003 | 0.58 | 0.0 | 0.03 | 22.69 | 0.00 | 2.169 | 9.65 | 0.18 | 5.5 | 94.5 | 0.0 | -0.74 | 1.23 | 0.76 | 0.80 | 3.38 | 9354 | 618 | 8 | 209 | 0 | 0 | 0 | logfile |
✔ | 7JGG | 22326 | 2023-08-09 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.49 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.47 | 0.0 | 0.03 | 12.80 | 0.00 | 1.958 | 77.81 | 0.00 | 4.3 | 95.7 | 0.0 | 1.53 | 1.24 | 0.66 | 0.69 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 8ABY | 15327 | 2023-08-18 | 2022-07-05 | 3.7 | 4.01 | 3.81 | 4.0 | 0.004 | 0.62 | 0.0 | 0.04 | 14.65 | 0.00 | 2.131 | 10.11 | 0.00 | 4.0 | 96.0 | 0.0 | -0.33 | 0.80 | 0.82 | 1.54 | 4.0 | 0.005 | 0.65 | 0.0 | 0.04 | 16.22 | 0.00 | 2.122 | 10.44 | 0.19 | 4.4 | 95.6 | 0.0 | 0.24 | 0.45 | 0.80 | 0.85 | 1.30 | 25719 | 3166 | 9 | 46 | 3 | 0 | 0 | logfile |
✔ | 6Y9A | 10734 | 2023-08-09 | 2020-03-06 | 4.2 | 5.61 | — | 5.7 | 0.004 | 0.81 | 0.0 | 0.05 | 13.59 | 0.01 | 2.211 | 10.90 | 0.00 | 5.9 | 94.1 | 0.0 | -1.17 | 0.53 | 0.44 | — | 5.6 | 0.004 | 0.77 | 0.0 | 0.05 | 13.55 | 0.01 | 2.116 | 20.54 | 0.00 | 6.5 | 93.5 | 0.0 | 0.07 | 1.42 | 0.56 | 0.67 | — | 5948 | 776 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PQQ | 13596 | 2023-08-09 | 2021-09-18 | 3.3 | 3.44 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 14.02 | 0.00 | 2.244 | 12.20 | 0.00 | 4.6 | 95.4 | 0.0 | -2.50 | 0.44 | 0.73 | 3.02 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.11 | 0.00 | 2.206 | 9.92 | 0.00 | 3.6 | 96.4 | 0.0 | -1.59 | 0.48 | 0.44 | 0.75 | 2.63 | 3207 | 417 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E4H | 30985 | 2023-08-12 | 2021-02-13 | 3.01 | 3.56 | — | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 11.78 | 0.00 | 2.195 | 5.39 | 0.00 | 2.2 | 97.8 | 0.0 | -0.52 | 0.64 | 0.79 | 2.98 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.00 | 0.00 | 2.186 | 5.90 | 0.17 | 2.2 | 97.8 | 0.0 | 0.30 | 1.17 | 0.61 | 0.77 | 2.19 | 10752 | 1354 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E5B | 27909 | 2023-08-16 | 2022-08-20 | 3.3 | 3.38 | 3.29 | 3.4 | 0.005 | 0.58 | 0.0 | 0.11 | 14.62 | 0.00 | 2.181 | 6.78 | 0.00 | 4.7 | 95.3 | 0.0 | -0.27 | 0.60 | 0.81 | 2.63 | 3.3 | 0.004 | 0.65 | 0.0 | 0.05 | 16.23 | 0.00 | 2.101 | 7.39 | 0.32 | 5.1 | 94.9 | 0.0 | -0.24 | 0.32 | 0.61 | 0.85 | 2.06 | 20310 | 2502 | 10 | 0 | 18 | 0 | 0 | logfile |
✔ | 7RHL | 24465 | 2023-08-14 | 2021-07-17 | 3.03 | 2.43 | — | 2.7 | 0.003 | 0.56 | 0.0 | 0.04 | 13.97 | 0.00 | 2.217 | 5.43 | 0.00 | 1.5 | 98.5 | 0.0 | 1.66 | 0.63 | 0.84 | 3.54 | 2.7 | 0.005 | 0.56 | 0.0 | 0.04 | 15.12 | 0.00 | 2.189 | 8.61 | 0.25 | 1.4 | 98.6 | 0.0 | 2.63 | 0.37 | 0.63 | 0.86 | 3.73 | 15371 | 1932 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CX0 | 27032 | 2023-08-10 | 2022-05-19 | 2.7 | 3.46 | 2.59 | 3.0 | 0.006 | 0.70 | 0.0 | 0.05 | 14.18 | 0.00 | 2.270 | 2.23 | 0.00 | 3.0 | 97.0 | 0.0 | 0.97 | 0.87 | 0.84 | 3.62 | 3.0 | 0.003 | 0.71 | 0.0 | 0.04 | 15.78 | 0.00 | 2.076 | 8.43 | 1.13 | 2.5 | 97.5 | 0.0 | 1.32 | 2.02 | 0.87 | 0.88 | 3.14 | 7575 | 889 | 8 | 8 | 3 | 0 | 0 | logfile |