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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QKW | 14055 | 2023-08-09 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.50 | 0.0 | 0.05 | 16.64 | 0.00 | 2.420 | 1.91 | 2.54 | 4.4 | 95.6 | 0.0 | -2.76 | 1.36 | 0.41 | 0.84 | 5.96 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 8oRE | 17121 | 2023-08-09 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.69 | 0.0 | 0.05 | 17.33 | 0.00 | 2.218 | 3.60 | 1.00 | 6.7 | 93.3 | 0.0 | -1.84 | 3.46 | 0.37 | 0.81 | 5.04 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 7TPA | 26050 | 2023-08-17 | 2022-01-25 | 3.6 | 3.99 | — | 3.6 | 0.013 | 1.75 | 3.0 | 0.10 | 13.03 | 0.01 | 2.510 | 0.00 | 1.11 | 6.5 | 92.8 | 0.8 | -1.19 | 0.84 | 0.85 | 2.96 | 3.6 | 0.004 | 0.65 | 0.0 | 0.04 | 13.64 | 0.00 | 2.080 | 5.25 | 0.13 | 5.2 | 94.6 | 0.2 | 0.05 | 0.48 | 0.84 | 0.85 | 2.65 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7QL2 | 14061 | 2023-08-09 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.5 | 0.003 | 0.58 | 0.0 | 0.05 | 12.52 | 0.00 | 2.497 | 2.63 | 1.48 | 8.3 | 91.7 | 0.0 | -3.27 | 1.13 | 0.22 | 0.72 | 4.36 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 8DG4 | 27407 | 2023-08-27 | 2022-06-23 | 3.12 | 3.38 | 3.17 | 3.4 | 0.013 | 1.93 | 24.0 | 0.10 | 13.65 | 0.01 | 2.537 | 0.00 | 0.15 | 3.9 | 96.0 | 0.1 | -2.10 | 0.68 | 0.80 | 3.99 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 15.26 | 0.00 | 1.893 | 2.64 | 0.30 | 4.0 | 96.0 | 0.0 | -1.15 | 0.46 | 0.65 | 0.79 | 2.68 | 52368 | 3488 | 8 | 0 | 0 | 0 | 25920 | logfile |
✔ | 7QVF | 14176 | 2023-08-10 | 2022-01-21 | 3.64 | 3.54 | 3.42 | 4.1 | 0.012 | 2.10 | 22.0 | 0.12 | 15.51 | 0.01 | 2.525 | 0.00 | 0.53 | 6.0 | 94.0 | 0.0 | -2.41 | 0.43 | 0.77 | 3.90 | 3.6 | 0.005 | 0.87 | 0.0 | 0.06 | 16.80 | 0.00 | 2.168 | 16.59 | 1.19 | 6.6 | 93.4 | 0.0 | -2.44 | 3.86 | 0.40 | 0.75 | 3.27 | 6516 | 810 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ADM | 11731 | 2023-08-11 | 2020-09-15 | 3.5 | 3.77 | 3.57 | 3.8 | 0.013 | 1.98 | 3.0 | 0.11 | 15.37 | 0.02 | 2.582 | 0.00 | 0.73 | 11.9 | 88.1 | 0.0 | -2.91 | 0.49 | 0.70 | 2.46 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 16.44 | 0.00 | 2.068 | 10.08 | 0.18 | 11.4 | 88.6 | 0.0 | -1.79 | 0.91 | 0.49 | 0.71 | 2.27 | 9726 | 614 | 1 | 0 | 0 | 0 | 4799 | logfile |
✔ | 7JG7 | 22313 | 2023-08-15 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.16 | 0.0 | 0.00 | 7.34 | 0.01 | 2.119 | 4.50 | 0.00 | 14.7 | 85.1 | 0.1 | -2.00 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2023-08-09 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.85 | 0.0 | 0.04 | 5.41 | 0.00 | 2.334 | 6.19 | 0.00 | 9.6 | 90.4 | 0.0 | -1.73 | 1.59 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCH | 12266 | 2023-08-12 | 2021-01-28 | 3.84 | 3.76 | 3.69 | 3.8 | 0.013 | 1.61 | 2.0 | 0.10 | 14.68 | 0.00 | 2.485 | 0.00 | 0.19 | 9.4 | 90.6 | 0.0 | -3.70 | 0.60 | 0.45 | 2.36 | 3.8 | 0.003 | 0.70 | 2.0 | 0.05 | 15.63 | 0.00 | 1.978 | 9.23 | 0.00 | 11.2 | 88.8 | 0.0 | -4.13 | 1.66 | 0.64 | 0.52 | 2.25 | 11292 | 816 | 12 | 0 | 0 | 0 | 5796 | logfile |
✔ | 7QKG | 14041 | 2023-08-09 | 2021-12-17 | 3.36 | 3.19 | 3.09 | 3.4 | 0.010 | 2.03 | 0.0 | 0.10 | 10.76 | 0.01 | 2.528 | 0.00 | 0.00 | 6.4 | 93.6 | 0.0 | -1.98 | 0.38 | 0.80 | 4.23 | 3.5 | 0.003 | 0.59 | 0.0 | 0.05 | 13.27 | 0.00 | 2.236 | 5.27 | 0.00 | 4.5 | 95.5 | 0.0 | -1.51 | 1.16 | 0.36 | 0.83 | 4.87 | 2469 | 162 | 3 | 0 | 0 | 0 | 1278 | logfile |
✔ | 7NCA | 12264 | 2023-08-11 | 2021-01-28 | 3.47 | 3.58 | 3.04 | 3.6 | 0.012 | 2.04 | 0.0 | 0.08 | 10.64 | 0.01 | 2.645 | 0.00 | 0.19 | 5.5 | 94.5 | 0.0 | -2.04 | 0.73 | 0.85 | 4.45 | 3.7 | 0.002 | 0.49 | 0.0 | 0.05 | 12.94 | 0.00 | 2.433 | 0.77 | 0.39 | 2.7 | 97.3 | 0.0 | -2.96 | 0.76 | 0.69 | 0.85 | 3.43 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✔ | 7QL0 | 14059 | 2023-08-09 | 2021-12-19 | 3.13 | 2.96 | 2.97 | 3.1 | 0.011 | 1.87 | 0.0 | 0.09 | 12.06 | 0.01 | 2.510 | 0.00 | 0.00 | 4.0 | 96.0 | 0.0 | -2.04 | 0.39 | 0.77 | 6.02 | 3.2 | 0.003 | 0.59 | 0.0 | 0.05 | 14.36 | 0.00 | 2.094 | 6.58 | 0.00 | 1.0 | 99.0 | 0.0 | -1.73 | 1.65 | 0.41 | 0.84 | 6.04 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 7QKi | 14043 | 2023-08-10 | 2021-12-17 | 3.13 | 3.29 | 3.04 | 3.2 | 0.011 | 1.99 | 3.0 | 0.10 | 9.18 | 0.01 | 2.508 | 0.00 | 0.00 | 10.1 | 89.9 | 0.0 | -1.50 | 0.41 | 0.79 | 6.28 | 3.3 | 0.004 | 0.63 | 0.0 | 0.05 | 11.95 | 0.00 | 2.085 | 5.52 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.77 | 0.39 | 0.81 | 5.60 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 7JG6 | 22312 | 2023-08-15 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.004 | 0.90 | 0.0 | 0.00 | 5.83 | 0.00 | 2.226 | 1.17 | 0.00 | 11.4 | 88.6 | 0.0 | -0.80 | 1.65 | 0.71 | 0.69 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7QL3 | 14062 | 2023-08-09 | 2021-12-19 | 3.32 | 3.47 | 3.01 | 3.5 | 0.011 | 2.01 | 8.0 | 0.11 | 12.27 | 0.01 | 2.489 | 0.00 | 0.00 | 7.7 | 92.3 | 0.0 | -3.47 | 0.46 | 0.82 | 4.29 | 3.5 | 0.004 | 0.76 | 0.0 | 0.05 | 13.63 | 0.01 | 2.128 | 5.14 | 0.27 | 4.1 | 95.9 | 0.0 | -2.49 | 1.15 | 0.43 | 0.83 | 4.92 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK1 | 14028 | 2023-08-09 | 2021-12-17 | 3.03 | 3.20 | 2.13 | 3.2 | 0.011 | 1.97 | 2.0 | 0.11 | 12.98 | 0.01 | 2.502 | 0.00 | 0.00 | 5.5 | 94.5 | 0.0 | -1.61 | 0.48 | 0.84 | 4.10 | 3.2 | 0.004 | 0.75 | 0.0 | 0.05 | 16.44 | 0.00 | 2.210 | 6.55 | 0.51 | 3.7 | 96.3 | 0.0 | -1.82 | 3.39 | 0.41 | 0.84 | 4.27 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ED3 | 28027 | 2023-08-22 | 2022-09-02 | 3.5 | 3.26 | 3.44 | 3.5 | 0.013 | 1.18 | 0.0 | 0.08 | 10.35 | 0.01 | 2.429 | 0.01 | 0.00 | 2.5 | 97.5 | 0.0 | -0.72 | 0.79 | 0.77 | 1.60 | 3.5 | 0.005 | 0.62 | 0.0 | 0.05 | 14.87 | 0.01 | 2.063 | 8.07 | 0.30 | 2.5 | 97.5 | 0.0 | 0.79 | 0.88 | 0.79 | 0.81 | 1.42 | 91140 | 12060 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TP9 | 26049 | 2023-08-17 | 2022-01-25 | 3.48 | 3.86 | — | 3.5 | 0.014 | 1.77 | 6.0 | 0.10 | 12.86 | 0.01 | 2.518 | 0.02 | 0.94 | 6.9 | 92.4 | 0.7 | -0.96 | 0.84 | 0.84 | 3.41 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 13.80 | 0.00 | 2.055 | 5.82 | 0.09 | 5.7 | 94.2 | 0.1 | 0.02 | 0.49 | 0.85 | 0.87 | 2.66 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7SCZ | 25043 | 2023-08-17 | 2021-09-29 | 3.5 | 4.01 | 3.49 | 3.8 | 0.014 | 1.91 | 1.0 | 0.09 | 27.47 | 0.03 | 2.529 | 0.04 | 0.00 | 1.7 | 98.3 | 0.0 | 0.09 | 0.80 | 0.77 | 2.51 | 3.8 | 0.005 | 0.64 | 0.0 | 0.04 | 27.89 | 0.00 | 1.967 | 6.90 | 0.00 | 2.2 | 97.8 | 0.0 | 2.69 | 1.42 | 0.79 | 0.80 | 1.57 | 23205 | 850 | 11 | 294 | 0 | 0 | 10435 | logfile |