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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZZ4 | 15034 | 2023-08-09 | 2022-05-25 | 2.63 | 3.04 | 2.56 | 2.2 | 0.008 | 1.05 | 0.0 | 0.05 | 17.04 | 0.00 | 2.035 | 5.21 | 0.27 | 3.3 | 96.7 | 0.0 | -0.79 | 0.86 | 0.84 | 4.14 | 2.2 | 0.003 | 0.54 | 0.0 | 0.04 | 17.07 | 0.00 | 1.948 | 10.15 | 1.59 | 3.7 | 96.3 | 0.0 | 0.70 | 0.28 | 0.87 | 0.85 | 3.99 | 3682 | 463 | 1 | 0 | 3 | 11 | 0 | logfile |
✔ | 7TLY | 25990 | 2023-08-09 | 2022-01-19 | 3.0 | 3.01 | 2.93 | 3.0 | 0.010 | 1.32 | 2.0 | 0.08 | 9.97 | 0.00 | 2.556 | 1.69 | 0.00 | 2.5 | 97.5 | 0.0 | 0.36 | 0.64 | 0.76 | 4.98 | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 13.83 | 0.00 | 2.186 | 3.71 | 2.81 | 3.3 | 96.7 | 0.0 | -0.93 | 1.02 | 0.68 | 0.82 | 4.76 | 3105 | 408 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8HHL | 34803 | 2023-08-10 | 2022-11-16 | 2.87 | 3.25 | 2.89 | 3.1 | 0.004 | 0.50 | 0.0 | 0.04 | 19.77 | 0.00 | 2.126 | 6.49 | 2.29 | 1.4 | 98.6 | 0.0 | 2.28 | 0.77 | 0.81 | 3.37 | 3.1 | 0.004 | 0.55 | 0.0 | 0.04 | 20.68 | 0.00 | 1.929 | 7.19 | 3.33 | 1.4 | 98.6 | 0.0 | 2.89 | 2.37 | 0.82 | 0.85 | 3.79 | 6971 | 592 | 6 | 111 | 4 | 0 | 0 | logfile |
✔ | 7Vo0 | 32048 | 2023-08-10 | 2021-10-12 | 3.4 | 3.66 | 3.41 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 21.10 | 0.00 | 1.938 | 7.44 | 0.17 | 1.8 | 98.2 | 0.0 | 0.39 | 0.73 | 0.66 | 1.10 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 22.99 | 0.00 | 1.907 | 11.51 | 0.17 | 2.1 | 97.9 | 0.0 | 1.05 | 1.39 | 0.83 | 0.83 | 1.44 | 7661 | 786 | 14 | 86 | 18 | 0 | 0 | logfile |
✔ | 7LYS | 23600 | 2023-08-13 | 2021-03-08 | 3.05 | 2.55 | 3.08 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 17.65 | 0.00 | 1.976 | 5.82 | 0.17 | 0.0 | 100.0 | 0.0 | -1.46 | 0.83 | 0.83 | 2.05 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 18.37 | 0.00 | 1.996 | 6.26 | 0.00 | 3.6 | 96.4 | 0.0 | 1.10 | 0.36 | 0.83 | 0.84 | 2.10 | 13573 | 669 | 4 | 89 | 0 | 0 | 6374 | logfile |
✔ | 8DC2 | 27320 | 2023-08-10 | 2022-06-15 | 2.99 | 2.48 | 3.03 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 17.64 | 0.00 | 2.216 | 11.65 | 0.16 | 3.0 | 97.0 | 0.0 | 1.17 | 0.82 | 0.83 | 2.49 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 19.28 | 0.00 | 2.229 | 12.67 | 1.93 | 4.0 | 96.0 | 0.0 | 0.74 | 0.36 | 0.83 | 0.85 | 2.50 | 7296 | 673 | 4 | 87 | 0 | 0 | 0 | logfile |
✔ | 7NKA | 12435 | 2023-08-20 | 2021-02-17 | 4.07 | 4.20 | — | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 13.49 | 0.00 | 1.908 | 8.61 | 0.00 | 4.0 | 96.0 | 0.0 | -0.66 | 0.63 | 0.51 | — | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 14.26 | 0.00 | 1.859 | 11.93 | 0.00 | 5.0 | 95.0 | 0.0 | -0.06 | 1.89 | 0.73 | 0.68 | — | 28778 | 1796 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 6W5C | 21541 | 2023-08-11 | 2020-03-13 | 2.9 | 2.92 | — | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 16.12 | 0.00 | 2.103 | 8.53 | 0.85 | 7.4 | 92.4 | 0.2 | -1.44 | 0.84 | 0.82 | 4.35 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 18.02 | 0.00 | 2.027 | 10.36 | 1.70 | 7.5 | 92.5 | 0.0 | -0.17 | 1.16 | 0.83 | 0.82 | 3.72 | 10183 | 1023 | 5 | 105 | 0 | 0 | 0 | logfile |
✔ | 6MG8 | 9111 | 2023-08-10 | 2018-09-13 | 3.6 | 3.81 | 3.42 | 3.7 | 0.006 | 0.75 | 0.0 | 0.06 | 12.85 | 0.00 | 2.157 | 8.79 | 0.00 | 8.0 | 92.0 | 0.0 | -3.49 | 0.71 | 0.81 | 2.44 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 14.22 | 0.00 | 2.201 | 8.86 | 0.35 | 6.4 | 93.6 | 0.0 | -0.05 | 0.48 | 0.71 | 0.81 | 2.08 | 7034 | 985 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7QEU | 13941 | 2023-08-09 | 2021-12-03 | 2.7 | 3.39 | — | 3.0 | 0.007 | 0.80 | 0.0 | 0.04 | 13.54 | 0.00 | 2.135 | 3.49 | 0.00 | 2.6 | 97.4 | 0.0 | 0.76 | 0.78 | 0.87 | 3.01 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 14.96 | 0.00 | 2.155 | 3.83 | 1.55 | 2.0 | 98.0 | 0.0 | 3.38 | 0.40 | 0.79 | 0.88 | 2.92 | 3002 | 359 | 6 | 0 | 6 | 7 | 0 | logfile |
✔ | 7Q6Z | 13860 | 2023-08-11 | 2021-11-09 | 3.59 | 3.59 | 3.63 | 3.6 | 0.008 | 0.69 | 0.0 | 0.04 | 14.66 | 0.00 | 1.945 | 7.30 | 0.00 | 4.8 | 95.2 | 0.0 | 1.64 | 0.56 | 0.72 | 2.00 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 15.38 | 0.00 | 1.978 | 8.11 | 0.39 | 4.2 | 95.8 | 0.0 | 1.87 | 0.41 | 0.56 | 0.71 | 1.68 | 9754 | 597 | 3 | 0 | 4 | 0 | 4784 | logfile |
✔ | 6XQo | 22291 | 2023-08-09 | 2020-07-09 | 3.1 | 3.54 | — | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 15.61 | 0.00 | 1.956 | 9.56 | 3.52 | 4.4 | 95.6 | 0.0 | -2.83 | 0.76 | 0.75 | 2.70 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 16.64 | 0.00 | 2.162 | 11.50 | 0.70 | 2.6 | 97.4 | 0.0 | 0.54 | 1.26 | 0.78 | 0.78 | 1.48 | 4301 | 560 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8F6T | 28890 | 2023-08-09 | 2022-11-17 | 2.76 | 3.61 | 2.91 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.87 | 0.00 | 2.119 | 4.79 | 0.00 | 5.4 | 94.6 | 0.0 | 0.80 | 0.65 | 0.86 | 3.26 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 14.75 | 0.00 | 2.183 | 5.23 | 0.28 | 5.0 | 95.0 | 0.0 | 0.62 | 0.36 | 0.62 | 0.84 | 2.54 | 3473 | 428 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7X1R | 32947 | 2023-08-10 | 2022-02-24 | 3.9 | 3.98 | — | 3.9 | 0.007 | 0.75 | 0.0 | 0.05 | 14.08 | 0.00 | 2.205 | 9.01 | 0.25 | 2.3 | 97.7 | 0.0 | -0.91 | 0.74 | 0.82 | 1.82 | 4.0 | 0.004 | 0.66 | 0.0 | 0.05 | 16.50 | 0.00 | 2.266 | 11.91 | 0.63 | 3.3 | 96.7 | 0.0 | 0.39 | 1.77 | 0.74 | 0.82 | 1.48 | 7608 | 970 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WLC | 32581 | 2023-08-09 | 2022-01-13 | 4.0 | 4.24 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 13.71 | 0.00 | 2.198 | 15.62 | 0.00 | 6.1 | 93.9 | 0.0 | -1.35 | 0.71 | 0.77 | — | 4.2 | 0.004 | 0.80 | 0.0 | 0.05 | 16.00 | 0.00 | 2.188 | 18.56 | 0.56 | 8.3 | 91.7 | 0.0 | -1.72 | 0.54 | 0.72 | 0.78 | — | 3307 | 430 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F6G | 31479 | 2023-08-10 | 2021-06-25 | 2.9 | 3.07 | — | 3.0 | 0.009 | 0.98 | 0.0 | 0.08 | 13.58 | 0.00 | 2.197 | 4.74 | 0.65 | 3.0 | 97.0 | 0.0 | -0.57 | 0.67 | 0.78 | 2.90 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 16.23 | 0.00 | 2.076 | 6.05 | 1.83 | 3.3 | 96.7 | 0.0 | 0.78 | 1.10 | 0.64 | 0.80 | 2.38 | 8697 | 1061 | 6 | 0 | 7 | 0 | 0 | logfile |
✔ | 7R7N | 24299 | 2023-08-09 | 2021-06-25 | 3.95 | 4.08 | 3.93 | 4.1 | 0.010 | 1.24 | 0.0 | 0.07 | 9.48 | 0.00 | 2.553 | 0.78 | 0.45 | 3.2 | 96.8 | 0.0 | 0.00 | 0.81 | 0.77 | 3.23 | 4.0 | 0.004 | 0.75 | 0.0 | 0.05 | 14.46 | 0.00 | 2.255 | 8.72 | 0.45 | 5.6 | 94.4 | 0.0 | -1.27 | 1.32 | 0.83 | 0.80 | 2.47 | 2790 | 391 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7MK2 | 23884 | 2023-08-09 | 2021-04-21 | 3.8 | 3.60 | 3.84 | 3.6 | 0.004 | 0.69 | 0.0 | 0.04 | 14.23 | 0.00 | 2.228 | 8.87 | 0.00 | 7.7 | 92.3 | 0.0 | -1.60 | 0.63 | 0.77 | 0.81 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 15.99 | 0.00 | 2.276 | 8.50 | 0.35 | 4.4 | 95.6 | 0.0 | -0.78 | 2.00 | 0.62 | 0.76 | 0.77 | 5333 | 708 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7MFF | 23815 | 2023-08-10 | 2021-04-09 | 3.89 | 3.48 | — | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 15.24 | 0.00 | 2.193 | 8.89 | 0.12 | 3.5 | 96.5 | 0.0 | -0.09 | 0.69 | 0.71 | 1.30 | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 17.04 | 0.00 | 2.185 | 12.84 | 0.47 | 4.7 | 95.3 | 0.0 | 0.86 | 1.43 | 0.70 | 0.72 | 0.48 | 8003 | 1000 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7M5o | 23678 | 2023-08-12 | 2021-03-24 | 3.54 | 2.81 | 3.58 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 15.95 | 0.00 | 1.978 | 10.65 | 1.25 | 0.2 | 99.8 | 0.0 | -2.03 | 0.79 | 0.75 | 1.08 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 17.48 | 0.00 | 2.011 | 13.99 | 1.42 | 6.0 | 94.0 | 0.0 | -0.10 | 1.24 | 0.80 | 0.77 | 1.48 | 11648 | 655 | 3 | 37 | 1 | 0 | 5635 | logfile |