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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DZY | 30921 | 2023-08-15 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.83 | 0.0 | 0.00 | 5.21 | 0.00 | 2.105 | 3.02 | 0.00 | 10.5 | 89.3 | 0.2 | -2.46 | 2.13 | 0.71 | 0.70 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GTD | 34250 | 2023-08-20 | 2022-09-08 | 4.7 | 4.27 | 4.25 | 4.2 | 0.014 | 2.16 | 0.0 | 0.00 | 5.49 | 0.01 | 2.285 | 3.73 | 0.00 | 8.4 | 90.0 | 1.6 | 0.41 | 0.50 | 0.44 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.00 | 6.20 | 0.00 | 2.228 | 4.76 | 0.00 | 19.1 | 80.2 | 0.7 | -2.63 | 1.26 | 0.52 | 0.51 | — | 29580 | 7392 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2023-08-09 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 6.70 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 1.01 | 0.0 | 0.02 | 5.70 | 0.00 | 2.420 | 14.13 | 0.00 | 13.2 | 86.6 | 0.2 | -3.90 | 6.17 | 0.81 | 0.75 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 7BL6 | 12219 | 2023-08-22 | 2021-01-18 | 4.0 | 7.11 | — | 4.0 | 0.002 | 0.42 | 0.0 | 0.03 | 13.17 | 0.00 | 2.117 | 10.95 | 0.07 | 4.7 | 95.3 | 0.1 | -0.28 | 0.92 | 0.83 | — | 4.0 | 0.004 | 0.64 | 0.0 | 0.03 | 16.68 | 0.00 | 1.966 | 34.80 | 0.34 | 7.9 | 91.9 | 0.1 | -1.41 | 3.11 | 0.95 | 0.82 | — | 92769 | 3600 | 42 | 3016 | 5 | 27 | 0 | logfile |
✔ | 6MHX | 9121 | 2023-08-21 | 2018-09-18 | 4.0 | 4.20 | 3.97 | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 7.56 | 0.00 | 2.077 | 6.96 | 0.30 | 3.1 | 96.9 | 0.0 | -2.52 | 0.77 | 0.76 | — | 4.0 | 0.002 | 0.54 | 0.0 | 0.03 | 12.01 | 0.00 | 1.949 | 10.47 | 0.15 | 4.4 | 95.6 | 0.0 | 2.37 | 0.98 | 0.78 | 0.78 | — | 31612 | 2436 | 4 | 0 | 0 | 0 | 14648 | logfile |
✔ | 7EG6 | 31106 | 2023-08-12 | 2021-03-24 | 3.1 | 3.55 | — | 3.2 | 0.007 | 0.73 | 0.0 | 0.04 | 27.64 | 0.01 | 2.328 | 1.56 | 0.00 | 0.9 | 99.1 | 0.0 | -1.78 | 0.88 | 0.86 | 3.75 | 3.2 | 0.004 | 0.55 | 0.0 | 0.03 | 28.24 | 0.00 | 2.190 | 5.69 | 0.16 | 1.7 | 98.3 | 0.0 | 3.31 | 1.16 | 0.89 | 0.88 | 2.59 | 12118 | 779 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7UT4 | 26754 | 2023-08-24 | 2022-04-26 | 3.9 | 4.06 | — | 4.0 | 0.006 | 0.93 | 0.0 | 0.04 | 18.88 | 0.01 | 2.087 | 5.16 | 0.53 | 5.0 | 94.9 | 0.0 | -0.40 | 0.44 | 0.69 | 1.12 | 4.0 | 0.003 | 0.56 | 0.0 | 0.03 | 19.01 | 0.00 | 1.978 | 11.45 | 0.57 | 6.2 | 93.8 | 0.0 | 1.01 | 2.38 | 0.50 | 0.73 | 1.23 | 39740 | 2448 | 2 | 0 | 0 | 0 | 20092 | logfile |
✔ | 7TAN | 25777 | 2023-08-12 | 2021-12-21 | 3.0 | 2.95 | — | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 27.32 | 0.00 | 2.287 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 2.18 | 0.82 | 0.85 | 2.22 | 3.1 | 0.004 | 0.51 | 0.0 | 0.03 | 27.86 | 0.00 | 2.221 | 2.61 | 0.78 | 2.0 | 98.0 | 0.0 | 2.33 | 0.33 | 0.83 | 0.87 | 2.17 | 12119 | 768 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7P0Z | 13153 | 2023-08-12 | 2021-07-01 | 2.43 | 2.02 | 2.41 | 2.2 | 0.016 | 0.94 | 0.0 | 0.06 | 14.02 | 0.01 | 2.141 | 7.29 | 0.00 | 4.3 | 95.7 | 0.0 | 1.90 | 0.83 | 0.86 | 2.91 | 2.3 | 0.002 | 0.49 | 0.0 | 0.03 | 18.12 | 0.00 | 2.239 | 4.38 | 1.64 | 0.7 | 99.3 | 0.0 | 5.47 | 0.55 | 0.84 | 0.87 | 2.18 | 12873 | 1652 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TAS | 10426 | 2023-08-10 | 2019-10-30 | 2.75 | 2.69 | — | 3.8 | 0.006 | 0.87 | 4.0 | 0.06 | 14.84 | 0.01 | 2.094 | 12.58 | 0.11 | 7.7 | 92.3 | 0.0 | -1.28 | 0.53 | 0.75 | 2.28 | 2.7 | 0.002 | 0.58 | 0.0 | 0.03 | 17.99 | 0.00 | 2.213 | 5.25 | 3.06 | 3.8 | 96.2 | 0.0 | 1.04 | 0.57 | 0.58 | 0.80 | 2.21 | 8552 | 1044 | 10 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2023-08-09 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.07 | 0.00 | 2.343 | 5.71 | 0.00 | 0.0 | 100.0 | 0.0 | 5.84 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2023-08-09 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.52 | 0.00 | 2.337 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.26 | 0.24 | 0.80 | 0.83 | 2.93 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NQA | 0480 | 2023-08-16 | 2019-01-19 | 3.54 | 3.64 | 4.03 | 3.6 | 0.007 | 0.87 | 0.0 | 0.05 | 25.44 | 0.01 | 2.283 | 4.11 | 0.40 | 5.8 | 94.2 | 0.0 | -4.04 | 0.76 | 0.81 | 1.45 | 3.6 | 0.003 | 0.58 | 0.0 | 0.03 | 26.52 | 0.00 | 2.126 | 7.19 | 0.30 | 3.2 | 96.8 | 0.0 | 0.09 | 1.68 | 0.80 | 0.83 | 1.64 | 15322 | 1164 | 13 | 292 | 1 | 0 | 0 | logfile |
✔ | 8EQU | 28546 | 2023-08-09 | 2022-10-09 | 2.8 | 3.03 | 2.80 | 3.0 | 0.004 | 0.79 | 0.0 | 0.04 | 12.39 | 0.00 | 2.317 | 8.25 | 0.00 | 1.9 | 98.1 | 0.0 | -0.12 | 0.64 | 0.76 | 2.12 | 3.0 | 0.003 | 0.61 | 0.0 | 0.03 | 14.52 | 0.00 | 2.138 | 7.45 | 3.04 | 1.7 | 98.3 | 0.0 | 0.23 | 1.09 | 0.68 | 0.83 | 2.86 | 5764 | 542 | 10 | 0 | 318 | 0 | 0 | logfile |
✔ | 7RZV | 24779 | 2023-08-09 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.37 | 0.0 | 0.03 | 15.99 | 0.00 | 2.228 | 4.86 | 0.67 | 0.0 | 100.0 | 0.0 | 5.66 | 0.87 | 0.83 | 0.83 | 1.88 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WCC | 21606 | 2023-08-12 | 2020-03-30 | 3.24 | 3.27 | — | 3.3 | 0.003 | 0.51 | 0.0 | 0.03 | 15.73 | 0.00 | 2.025 | 4.39 | 2.26 | 0.8 | 99.2 | 0.0 | 1.46 | 0.53 | 0.76 | 1.58 | 3.3 | 0.004 | 0.54 | 0.0 | 0.03 | 15.79 | 0.00 | 2.165 | 7.14 | 0.32 | 2.8 | 97.2 | 0.0 | 3.98 | 1.30 | 0.51 | 0.78 | 1.96 | 11629 | 734 | 6 | 0 | 5 | 12 | 5908 | logfile |
✔ | 8ATF | 15647 | 2023-08-14 | 2022-08-23 | 3.45 | 3.54 | 3.42 | 3.5 | 0.013 | 1.99 | 4.0 | 0.11 | 24.98 | 0.03 | 2.090 | 4.15 | 1.81 | 3.1 | 96.2 | 0.7 | -2.09 | 0.71 | 0.80 | 2.97 | 3.5 | 0.003 | 0.58 | 0.0 | 0.03 | 25.88 | 0.00 | 2.235 | 6.93 | 0.00 | 1.8 | 98.2 | 0.0 | 1.86 | 2.25 | 0.78 | 0.85 | 1.65 | 15719 | 1219 | 13 | 286 | 1 | 0 | 0 | logfile |
✔ | 6T7D | 10394 | 2023-08-10 | 2019-10-21 | 4.4 | 4.45 | 4.29 | 4.1 | 0.005 | 0.86 | 0.0 | 0.05 | 32.64 | 0.01 | 2.107 | 2.55 | 0.00 | 2.0 | 98.0 | 0.0 | -2.34 | 0.86 | 0.77 | — | 4.1 | 0.004 | 0.65 | 0.0 | 0.03 | 32.45 | 0.00 | 2.138 | 11.97 | 0.00 | 2.8 | 97.2 | 0.0 | 3.16 | 0.72 | 0.87 | 0.82 | — | 8209 | 853 | 11 | 234 | 0 | 0 | 0 | logfile |
✔ | 7QA8 | 13880 | 2023-08-09 | 2021-11-16 | 2.7 | 2.20 | 2.66 | 2.7 | 0.009 | 1.11 | 0.0 | 0.06 | 14.61 | 0.01 | 2.323 | 1.73 | 0.75 | 3.3 | 96.7 | 0.0 | -2.98 | 0.59 | 0.79 | 2.15 | 2.5 | 0.002 | 0.61 | 0.0 | 0.03 | 16.34 | 0.00 | 2.228 | 4.64 | 3.55 | 3.3 | 96.7 | 0.0 | 2.93 | 0.41 | 0.59 | 0.80 | 2.30 | 6111 | 622 | 11 | 0 | 38 | 70 | 0 | logfile |
✔ | 6S01 | 10069 | 2023-08-12 | 2019-06-13 | 3.2 | 3.27 | 3.17 | 3.2 | 0.008 | 0.72 | 0.0 | 0.04 | 26.34 | 0.01 | 2.284 | 3.83 | 1.82 | 3.9 | 96.1 | 0.0 | -5.85 | 0.74 | 0.77 | 3.18 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 27.91 | 0.00 | 2.124 | 8.90 | 0.70 | 3.4 | 96.6 | 0.0 | 0.78 | 0.51 | 0.82 | 0.85 | 2.78 | 12959 | 853 | 11 | 300 | 0 | 0 | 0 | logfile |