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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XMS | 33303 | 2023-10-04 | 2022-04-26 | 2.9 | 3.10 | 2.83 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 10.09 | 0.00 | 2.251 | 6.90 | 0.00 | 2.9 | 97.1 | 0.0 | -4.06 | 0.55 | 0.65 | 1.49 | 3.1 | 0.004 | 0.76 | 0.0 | 0.04 | 14.98 | 0.00 | 2.040 | 14.79 | 1.73 | 3.7 | 96.3 | 0.0 | -0.47 | 0.80 | 0.61 | 0.76 | 2.09 | 8370 | 1113 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WUi | 32836 | 2023-10-06 | 2022-02-08 | 3.1 | 2.72 | — | 3.1 | 0.007 | 1.11 | 0.0 | 0.07 | 13.96 | 0.01 | 2.221 | 25.88 | 0.29 | 4.3 | 95.7 | 0.0 | -2.70 | 0.53 | 0.65 | 2.45 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 15.87 | 0.00 | 2.068 | 23.29 | 0.77 | 4.1 | 95.9 | 0.0 | -1.08 | 1.15 | 0.56 | 0.73 | 2.31 | 9666 | 1225 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZG | 24759 | 2023-10-07 | 2021-08-27 | 4.1 | 3.50 | — | 3.7 | 0.007 | 1.17 | 0.0 | 0.06 | 12.78 | 0.01 | 2.077 | 19.55 | 0.18 | 6.1 | 93.9 | 0.0 | -3.80 | 0.62 | 0.67 | — | 3.4 | 0.005 | 0.82 | 0.0 | 0.05 | 14.11 | 0.01 | 2.129 | 14.62 | 0.00 | 6.7 | 93.3 | 0.0 | -1.05 | 1.27 | 0.63 | 0.70 | — | 15385 | 1888 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZE | 24757 | 2023-10-07 | 2021-08-27 | 3.3 | 3.26 | — | 3.4 | 0.005 | 0.97 | 0.0 | 0.06 | 13.09 | 0.01 | 2.098 | 10.04 | 0.30 | 3.9 | 96.1 | 0.0 | -3.81 | 0.64 | 0.77 | 2.14 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.27 | 0.00 | 2.209 | 7.84 | 0.65 | 4.7 | 95.3 | 0.0 | -0.04 | 0.64 | 0.67 | 0.82 | 2.29 | 15545 | 1898 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EW2 | 28640 | 2023-10-05 | 2022-10-21 | 3.1 | 3.17 | 3.24 | 3.1 | 0.004 | 0.63 | 0.0 | 0.04 | 17.05 | 0.00 | 2.188 | 13.54 | 0.46 | 3.4 | 96.6 | 0.0 | 0.64 | 0.78 | 0.88 | 2.37 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.38 | 0.00 | 2.159 | 12.10 | 0.18 | 3.1 | 96.9 | 0.0 | 1.12 | 0.37 | 0.78 | 0.88 | 2.01 | 10340 | 1356 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NCK | 12269 | 2023-10-03 | 2021-01-28 | 3.18 | 3.22 | 2.86 | 3.4 | 0.011 | 2.19 | 6.0 | 0.10 | 11.66 | 0.01 | 2.583 | 0.37 | 3.33 | 4.0 | 96.0 | 0.0 | -2.54 | 0.39 | 0.71 | 4.89 | 3.4 | 0.003 | 0.58 | 0.0 | 0.05 | 15.74 | 0.00 | 2.151 | 7.19 | 0.37 | 4.3 | 95.7 | 0.0 | -2.05 | 0.92 | 0.33 | 0.71 | 2.63 | 5430 | 384 | 6 | 0 | 0 | 0 | 2778 | logfile |
✘ | 3JC5 | 6535 | 2023-10-19 | 2015-11-24 | 4.7 | 5.02 | — | 4.8 | 0.009 | 1.54 | 5.0 | 0.06 | 12.17 | 0.01 | 0.300 | 46.29 | 0.63 | 9.4 | 88.9 | 1.7 | -4.21 | 0.76 | 0.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40041 | 5039 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JQC | 22433 | 2023-10-15 | 2020-08-10 | 3.3 | 3.83 | — | 3.4 | 0.006 | 0.93 | 0.0 | 0.05 | 17.61 | 0.01 | 2.211 | 7.87 | 0.50 | 7.6 | 92.3 | 0.2 | -4.52 | 0.80 | 0.80 | 1.10 | 3.4 | 0.004 | 0.68 | 0.0 | 0.04 | 17.82 | 0.00 | 2.045 | 19.44 | 0.36 | 8.6 | 91.4 | 0.0 | -1.99 | 1.62 | 0.81 | 0.81 | 1.02 | 77823 | 4837 | 35 | 1840 | 0 | 0 | 0 | logfile |
✔ | 5U6o | 8511 | 2023-10-07 | 2016-12-08 | 3.5 | 3.58 | — | 3.5 | 0.008 | 1.44 | 0.0 | 0.08 | 11.34 | 0.01 | 2.380 | 2.59 | 0.00 | 4.6 | 95.4 | 0.0 | 1.02 | 0.54 | 0.66 | 2.98 | 3.5 | 0.002 | 0.61 | 0.0 | 0.04 | 15.08 | 0.00 | 2.203 | 9.26 | 0.37 | 1.9 | 98.1 | 0.0 | 2.22 | 0.66 | 0.67 | 0.82 | 1.80 | 14480 | 1928 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Li3 | 0902 | 2023-10-03 | 2019-12-10 | 3.32 | 3.48 | — | 3.8 | 0.002 | 0.56 | 0.0 | 0.04 | 13.86 | 0.00 | 2.124 | 7.66 | 0.00 | 2.4 | 97.6 | 0.0 | -2.69 | 0.55 | 0.68 | 0.78 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 16.65 | 0.00 | 2.150 | 9.72 | 0.33 | 3.8 | 96.2 | 0.0 | -0.12 | 1.35 | 0.59 | 0.77 | 1.61 | 8289 | 1045 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UZL | 20962 | 2023-10-03 | 2019-11-15 | 4.4 | 4.66 | — | 4.4 | 0.005 | 1.00 | 0.0 | 0.05 | 13.21 | 0.01 | 2.198 | 27.71 | 0.18 | 15.1 | 84.1 | 0.8 | -4.74 | 0.69 | 0.77 | — | 4.4 | 0.004 | 0.78 | 0.0 | 0.05 | 11.93 | 0.01 | 2.150 | 18.15 | 0.00 | 7.8 | 92.2 | 0.0 | 0.50 | 0.98 | 0.68 | 0.77 | — | 7008 | 1062 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F1R | 31423 | 2023-10-03 | 2021-06-09 | 3.0 | 3.21 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 11.21 | 0.00 | 2.224 | 8.07 | 0.46 | 1.5 | 98.5 | 0.0 | -2.21 | 0.59 | 0.70 | 1.80 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 15.11 | 0.00 | 2.161 | 13.28 | 3.82 | 3.9 | 96.1 | 0.0 | 0.37 | 1.26 | 0.63 | 0.80 | 2.53 | 6621 | 894 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WVU | 32858 | 2023-10-03 | 2022-02-11 | 3.3 | 3.40 | — | 3.4 | 0.002 | 0.47 | 0.0 | 0.04 | 13.25 | 0.00 | 2.221 | 8.52 | 0.00 | 2.3 | 97.7 | 0.0 | 0.98 | 0.58 | 0.72 | 1.55 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.00 | 2.230 | 11.78 | 0.14 | 3.2 | 96.8 | 0.0 | 0.55 | 1.14 | 0.61 | 0.78 | 2.12 | 6862 | 909 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CH7 | 30370 | 2023-10-04 | 2020-07-05 | 3.9 | 4.00 | — | 3.9 | 0.007 | 0.94 | 0.0 | 0.05 | 16.39 | 0.01 | 2.096 | 26.29 | 18.11 | 13.6 | 86.4 | 0.0 | -4.81 | 0.69 | 0.81 | 1.59 | 3.9 | 0.004 | 0.91 | 0.0 | 0.05 | 16.49 | 0.00 | 2.102 | 19.77 | 0.91 | 6.8 | 93.2 | 0.0 | -1.29 | 1.30 | 0.68 | 0.79 | 1.48 | 9198 | 1214 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XN7 | 22269 | 2023-10-11 | 2020-07-02 | 3.47 | 3.24 | — | 3.3 | 0.007 | 1.10 | 0.0 | 0.06 | 15.52 | 0.01 | 2.236 | 5.61 | 0.09 | 7.1 | 92.9 | 0.0 | -3.47 | 0.71 | 0.80 | 2.88 | 3.3 | 0.005 | 0.66 | 0.0 | 0.04 | 16.72 | 0.00 | 2.118 | 12.77 | 0.40 | 7.7 | 92.3 | 0.0 | -1.13 | 0.40 | 0.72 | 0.82 | 2.21 | 22212 | 2580 | 12 | 74 | 0 | 0 | 0 | logfile |
✔ | 7RZi | 24761 | 2023-10-07 | 2021-08-27 | 3.0 | 3.17 | — | 3.2 | 0.006 | 0.97 | 1.0 | 0.06 | 12.55 | 0.01 | 2.203 | 10.47 | 0.47 | 1.7 | 98.3 | 0.0 | -4.04 | 0.67 | 0.79 | 2.92 | 3.2 | 0.003 | 0.66 | 0.0 | 0.04 | 17.09 | 0.00 | 2.218 | 6.38 | 2.04 | 3.0 | 97.0 | 0.0 | 0.10 | 1.67 | 0.70 | 0.84 | 2.74 | 15736 | 1921 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MoC | 23924 | 2023-10-06 | 2021-05-01 | 4.56 | 3.76 | 4.47 | 3.7 | 0.012 | 1.82 | 17.0 | 0.11 | 13.17 | 0.02 | 2.211 | 1.99 | 0.19 | 1.7 | 98.3 | 0.0 | -0.04 | 0.58 | 0.68 | — | 3.7 | 0.004 | 0.78 | 0.0 | 0.04 | 14.36 | 0.00 | 2.016 | 20.76 | 0.00 | 2.9 | 97.1 | 0.0 | 1.71 | 1.63 | 0.58 | 0.70 | — | 13883 | 1755 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W8o | 21576 | 2023-10-03 | 2020-03-20 | 3.4 | 4.30 | — | 4.1 | 0.029 | 1.20 | 3.0 | 0.05 | 17.62 | 0.01 | 1.161 | 20.04 | 11.79 | 6.7 | 93.3 | 0.0 | -3.22 | 0.57 | 0.81 | 1.49 | 4.1 | 0.005 | 0.97 | 0.0 | 0.05 | 17.25 | 0.00 | 2.031 | 19.32 | 0.75 | 6.9 | 93.1 | 0.0 | -0.03 | 1.18 | 0.55 | 0.78 | 1.50 | 6332 | 832 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7PQ5 | 13587 | 2023-10-04 | 2021-09-16 | 3.17 | 3.58 | 3.09 | 3.4 | 0.005 | 0.85 | 0.0 | 0.05 | 15.55 | 0.01 | 2.255 | 3.50 | 2.82 | 4.5 | 95.3 | 0.2 | -0.13 | 0.85 | 0.87 | 5.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8512 | 1047 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LQJ | 0947 | 2023-10-08 | 2020-01-13 | 3.24 | 3.40 | 3.06 | 3.4 | 0.007 | 0.74 | 0.0 | 0.05 | 16.29 | 0.00 | 2.216 | 11.27 | 5.34 | 9.1 | 90.9 | 0.0 | -3.28 | 0.74 | 0.84 | 2.87 | 3.4 | 0.003 | 0.62 | 0.0 | 0.05 | 16.76 | 0.00 | 2.169 | 12.21 | 0.38 | 8.5 | 91.5 | 0.0 | -0.64 | 0.46 | 0.73 | 0.85 | 2.73 | 17100 | 2214 | 18 | 0 | 0 | 0 | 0 | logfile |