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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7F56 | 31459 | 2023-10-13 | 2021-06-21 | 4.1 | 4.62 | — | 3.9 | 0.009 | 1.12 | 3.0 | 0.10 | 13.08 | 0.01 | 1.831 | 27.58 | 0.50 | 10.6 | 89.4 | 0.0 | -2.66 | 0.78 | 0.78 | — | 3.9 | 0.004 | 0.71 | 0.0 | 0.04 | 13.18 | 0.00 | 2.082 | 16.54 | 0.00 | 6.7 | 93.3 | 0.0 | -0.49 | 0.63 | 0.79 | 0.83 | — | 27834 | 3468 | 13 | 0 | 28 | 0 | 0 | logfile |
✔ | 7ENJ | 31211 | 2023-10-04 | 2021-04-17 | 4.4 | 4.62 | — | 4.0 | 0.011 | 1.18 | 16.0 | 0.07 | 15.29 | 0.01 | 2.211 | 7.81 | 1.23 | 5.7 | 93.7 | 0.6 | -2.67 | 0.75 | 0.49 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.04 | 14.06 | 0.00 | 2.061 | 16.81 | 0.00 | 5.9 | 94.0 | 0.2 | 0.98 | 0.78 | 0.81 | 0.65 | — | 57971 | 7340 | 27 | 0 | 21 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2023-10-10 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.67 | 0.00 | 2.069 | 13.64 | 0.00 | 9.3 | 90.5 | 0.2 | -0.09 | 0.76 | 0.78 | 0.81 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KAi | 22771 | 2023-10-05 | 2020-10-01 | 3.2 | 3.86 | 3.25 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 12.28 | 0.00 | 2.229 | 4.23 | 0.00 | 3.6 | 96.4 | 0.0 | -1.28 | 0.67 | 0.85 | 2.59 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 14.07 | 0.00 | 2.200 | 5.30 | 0.00 | 2.9 | 97.1 | 0.0 | 2.17 | 0.39 | 0.67 | 0.88 | 1.60 | 10718 | 1343 | 7 | 0 | 56 | 0 | 0 | logfile |
✔ | 7R7T | 24304 | 2023-10-17 | 2021-06-25 | 4.5 | 4.85 | — | 4.6 | 0.004 | 1.02 | 0.0 | 0.06 | 15.88 | 0.01 | 2.286 | 6.32 | 0.00 | 7.8 | 92.2 | 0.0 | -3.13 | 0.81 | 0.73 | — | 4.6 | 0.004 | 0.82 | 0.0 | 0.05 | 15.14 | 0.01 | 2.088 | 24.50 | 0.00 | 9.3 | 90.7 | 0.0 | -1.85 | 0.94 | 0.83 | 0.76 | — | 35351 | 4470 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 7QPA | 14116 | 2023-10-05 | 2022-01-03 | 3.18 | 3.43 | 3.17 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 14.82 | 0.01 | 2.208 | 8.98 | 0.00 | 2.2 | 97.8 | 0.0 | 1.43 | 0.55 | 0.74 | 1.92 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 15.26 | 0.01 | 2.020 | 10.09 | 0.00 | 3.3 | 96.7 | 0.0 | 1.45 | 0.43 | 0.51 | 0.74 | 1.99 | 10814 | 654 | 6 | 0 | 4 | 64 | 5540 | logfile |
✔ | 6XMU | 22264 | 2023-10-04 | 2020-06-30 | 3.3 | 3.92 | 3.36 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 11.80 | 0.00 | 1.956 | 6.47 | 0.00 | 4.3 | 95.7 | 0.0 | -2.43 | 0.72 | 0.83 | 2.22 | 3.7 | 0.003 | 0.59 | 0.0 | 0.04 | 13.63 | 0.00 | 1.933 | 6.11 | 0.00 | 3.8 | 96.2 | 0.0 | -0.13 | 0.40 | 0.73 | 0.86 | 1.72 | 8411 | 1090 | 3 | 0 | 22 | 0 | 0 | logfile |
✔ | 7BY0 | 30239 | 2023-10-06 | 2020-04-21 | 4.5 | 5.50 | — | 4.5 | 0.008 | 0.97 | 0.0 | 0.05 | 30.91 | 0.01 | 1.950 | 11.25 | 0.15 | 3.1 | 96.9 | 0.0 | -3.59 | 0.92 | 0.87 | — | 4.5 | 0.006 | 0.75 | 0.0 | 0.04 | 30.70 | 0.01 | 2.126 | 28.16 | 0.00 | 6.2 | 93.8 | 0.0 | -0.24 | 1.29 | 0.92 | 0.87 | — | 12693 | 868 | 12 | 286 | 0 | 0 | 0 | logfile |
✔ | 7STN | 25434 | 2023-10-12 | 2021-11-14 | 3.19 | 3.43 | — | 3.4 | 0.008 | 0.75 | 0.0 | 0.04 | 9.95 | 0.00 | 2.366 | 1.05 | 0.15 | 2.2 | 97.8 | 0.0 | 2.30 | 0.66 | 0.80 | 3.21 | 3.4 | 0.004 | 0.49 | 0.0 | 0.04 | 12.77 | 0.00 | 2.129 | 3.31 | 0.00 | 4.2 | 95.8 | 0.0 | 1.91 | 1.29 | 0.64 | 0.82 | 2.88 | 25188 | 1580 | 4 | 0 | 10 | 0 | 12256 | logfile |
✔ | 8H13 | 34423 | 2023-10-11 | 2022-09-30 | 4.05 | 4.03 | 4.00 | 4.0 | 0.004 | 0.86 | 0.0 | 0.05 | 14.15 | 0.01 | 2.254 | 3.85 | 0.83 | 5.0 | 95.0 | 0.0 | -1.27 | 0.76 | 0.79 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 13.89 | 0.00 | 2.170 | 7.72 | 0.00 | 4.3 | 95.7 | 0.0 | -0.28 | 0.44 | 0.75 | 0.77 | — | 22113 | 2793 | 6 | 0 | 21 | 0 | 0 | logfile |
✔ | 6XMP | 22260 | 2023-10-04 | 2020-06-30 | 3.5 | 4.29 | 3.63 | 4.0 | 0.007 | 0.78 | 0.0 | 0.04 | 13.27 | 0.00 | 2.192 | 6.56 | 0.00 | 2.9 | 97.1 | 0.0 | -1.66 | 0.72 | 0.84 | 1.55 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.26 | 0.00 | 2.173 | 6.27 | 0.00 | 3.2 | 96.8 | 0.0 | 1.22 | 0.33 | 0.71 | 0.85 | 1.45 | 8545 | 1086 | 1 | 0 | 12 | 0 | 0 | logfile |
✔ | 7TKQ | 25978 | 2023-10-10 | 2022-01-17 | 4.5 | 7.57 | 4.53 | 4.3 | 0.019 | 2.21 | 0.0 | 0.00 | 6.72 | 0.01 | 2.371 | 0.08 | 0.00 | 4.0 | 94.5 | 1.5 | -0.48 | 0.59 | 0.61 | — | 4.3 | 0.009 | 1.21 | 0.0 | 0.00 | 7.52 | 0.01 | 1.933 | 34.86 | 0.00 | 13.6 | 85.9 | 0.5 | -2.21 | 0.83 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RR7 | 4986 | 2023-10-17 | 2019-05-17 | 3.01 | 3.03 | — | 3.0 | 0.010 | 0.85 | 0.0 | 0.05 | 15.02 | 0.01 | 1.252 | 3.20 | 0.00 | 5.1 | 94.9 | 0.0 | -3.62 | 0.77 | 0.81 | 3.57 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 16.28 | 0.00 | 2.016 | 5.07 | 0.00 | 3.5 | 96.5 | 0.0 | -0.43 | 3.50 | 0.78 | 0.84 | 3.05 | 36290 | 2197 | 6 | 30 | 1 | 0 | 18001 | logfile |
✔ | 7TKo | 25976 | 2023-10-10 | 2022-01-17 | 4.8 | 7.71 | 5.39 | 4.4 | 0.019 | 2.23 | 0.0 | 0.00 | 6.74 | 0.01 | 2.314 | 0.12 | 0.00 | 4.8 | 93.9 | 1.4 | -0.54 | 0.62 | 0.65 | — | 4.4 | 0.004 | 0.84 | 0.0 | 0.00 | 5.80 | 0.00 | 2.139 | 12.52 | 0.00 | 10.1 | 89.6 | 0.2 | -0.46 | 0.84 | 0.84 | 0.82 | — | 20229 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PTQ | 13633 | 2023-10-08 | 2021-09-27 | 4.08 | 6.47 | 4.22 | 4.0 | 0.005 | 0.78 | 0.0 | 0.04 | 15.27 | 0.00 | 1.983 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.80 | — | 4.0 | 0.006 | 0.68 | 0.0 | 0.04 | 19.50 | 0.00 | 1.844 | 43.42 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.74 | 0.95 | 0.94 | — | 17434 | 0 | 1 | 544 | 0 | 0 | 5847 | logfile |
✔ | 7LAS | 23250 | 2023-10-09 | 2021-01-06 | 4.4 | 4.09 | — | 4.1 | 0.009 | 1.37 | 0.0 | 0.06 | 18.99 | 0.01 | 1.386 | 5.56 | 7.55 | 1.5 | 98.5 | 0.0 | -2.56 | 0.60 | 0.75 | — | 4.1 | 0.004 | 0.71 | 0.0 | 0.04 | 16.21 | 0.00 | 1.298 | 12.87 | 0.00 | 7.8 | 92.1 | 0.1 | -1.67 | 1.77 | 0.62 | 0.78 | — | 18011 | 1098 | 12 | 24 | 8 | 0 | 8624 | logfile |
✔ | 7TKG | 25968 | 2023-10-10 | 2022-01-17 | 4.5 | 7.60 | 4.79 | 4.2 | 0.019 | 2.20 | 0.0 | 0.00 | 6.95 | 0.01 | 2.361 | 0.08 | 0.00 | 4.3 | 94.2 | 1.5 | -0.60 | 0.58 | 0.61 | — | 4.3 | 0.007 | 1.14 | 0.0 | 0.00 | 7.61 | 0.01 | 2.015 | 33.28 | 0.00 | 19.7 | 80.0 | 0.3 | -3.26 | 2.09 | 0.77 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 5V4S | 8633 | 2023-10-05 | 2017-03-10 | 4.2 | 7.95 | — | 4.2 | 0.012 | 1.56 | 20.0 | 0.14 | 8.80 | 0.01 | 2.352 | 3.29 | 0.00 | 6.6 | 93.1 | 0.3 | -1.95 | 0.55 | 0.60 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 9.90 | 0.00 | 2.233 | 11.27 | 0.00 | 2.1 | 97.9 | 0.0 | 2.80 | 0.88 | 0.62 | 0.70 | — | 10756 | 1548 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DFL | 30665 | 2023-10-04 | 2020-11-09 | 3.3 | 4.03 | — | 3.9 | 0.008 | 0.95 | 0.0 | 0.06 | 11.97 | 0.01 | 1.910 | 9.78 | 0.00 | 6.1 | 93.9 | 0.0 | -0.96 | 0.63 | 0.75 | 2.51 | 3.9 | 0.004 | 0.74 | 0.0 | 0.04 | 15.67 | 0.00 | 2.070 | 13.69 | 0.00 | 4.7 | 95.3 | 0.0 | -0.18 | 0.91 | 0.56 | 0.73 | 2.23 | 8987 | 1133 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2023-10-03 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.81 | 0.00 | 2.550 | 7.73 | 0.00 | 18.2 | 81.3 | 0.5 | -4.24 | 2.61 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |