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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7R6N | 24283 | 2023-10-03 | 2021-06-22 | 4.1 | 3.51 | — | 3.7 | 0.006 | 0.96 | 0.0 | 0.04 | 17.22 | 0.01 | 2.036 | 3.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.56 | 0.75 | — | 3.7 | 0.007 | 0.83 | 0.0 | 0.04 | 17.79 | 0.01 | 1.759 | 18.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.27 | 0.58 | 0.76 | — | 7588 | 0 | 1 | 354 | 12 | 0 | 0 | logfile |
✔ | 6LHW | 0901 | 2023-10-06 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.027 | 44.00 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 7RX5 | 24725 | 2023-10-04 | 2021-08-21 | 3.4 | 3.65 | — | 3.6 | 0.002 | 0.25 | 0.0 | 0.03 | 11.98 | 0.00 | 2.288 | 5.05 | 0.00 | 0.0 | 100.0 | 0.0 | 4.54 | 0.70 | 0.85 | 3.58 | 3.6 | 0.003 | 0.35 | 0.0 | 0.03 | 13.46 | 0.00 | 2.257 | 6.36 | 0.00 | 0.0 | 100.0 | 0.0 | 5.01 | 0.27 | 0.71 | 0.88 | 2.75 | 9120 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2023-10-06 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.02 | 0.0 | 0.05 | 23.48 | 0.01 | 1.939 | 74.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.24 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2023-10-07 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.59 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 6.64 | 0.00 | 2.051 | 53.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.58 | 0.84 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 7QV6 | 14168 | 2023-10-03 | 2022-01-19 | 3.5 | 3.33 | 3.32 | 3.5 | 0.011 | 0.59 | 0.0 | 0.05 | 11.56 | 0.00 | 2.480 | 1.86 | 0.00 | 1.1 | 98.9 | 0.0 | -1.85 | 0.39 | 0.86 | 5.72 | 3.5 | 0.002 | 0.39 | 0.0 | 0.06 | 11.93 | 0.00 | 2.389 | 1.45 | 0.00 | 0.0 | 100.0 | 0.0 | 0.74 | 0.46 | 0.40 | 0.86 | 5.96 | 4842 | 306 | 18 | 0 | 0 | 0 | 2556 | logfile |
✔ | 6WL9 | 21818 | 2023-10-11 | 2020-04-18 | 4.2 | 4.68 | — | 4.4 | 0.006 | 0.53 | 0.0 | 0.04 | 13.18 | 0.00 | 2.052 | 24.33 | 0.00 | 1.9 | 98.1 | 0.0 | 1.21 | 0.74 | 0.87 | — | 4.4 | 0.004 | 0.85 | 0.0 | 0.05 | 13.42 | 0.00 | 2.210 | 16.90 | 0.05 | 0.0 | 100.0 | 0.0 | 2.71 | 0.97 | 0.73 | 0.86 | — | 23400 | 3016 | 104 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T6E | 25714 | 2023-10-02 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 125.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 134.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |
✔ | 8Q2J | 18109 | 2023-10-02 | 2023-08-02 | 2.23 | 2.02 | 2.19 | 2.2 | 0.011 | 1.72 | 0.0 | 0.08 | 11.08 | 0.01 | 2.490 | 0.14 | 0.00 | 1.8 | 98.2 | 0.0 | -1.62 | 0.29 | 0.75 | 7.51 | 2.2 | 0.004 | 0.61 | 0.0 | 0.05 | 18.89 | 0.00 | 2.248 | 4.91 | 1.00 | 0.0 | 100.0 | 0.0 | -1.89 | 1.63 | 0.43 | 0.90 | 7.16 | 3507 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2023-10-03 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.29 | 0.0 | 0.06 | 21.60 | 0.01 | 1.918 | 61.40 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 8QCR | 18333 | 2023-10-02 | 2023-08-28 | 2.75 | 2.70 | 2.59 | 2.9 | 0.011 | 1.78 | 0.0 | 0.08 | 9.60 | 0.01 | 2.505 | 0.00 | 0.00 | 3.0 | 97.0 | 0.0 | -1.85 | 0.33 | 0.79 | 7.24 | 2.9 | 0.002 | 0.52 | 0.0 | 0.05 | 16.26 | 0.00 | 2.227 | 3.81 | 0.00 | 0.0 | 100.0 | 0.0 | -0.50 | 2.19 | 0.39 | 0.87 | 7.57 | 3153 | 204 | 3 | 0 | 0 | 0 | 1608 | logfile |
✔ | 7R6M | 24282 | 2023-10-03 | 2021-06-22 | 3.68 | 3.27 | — | 3.4 | 0.006 | 0.94 | 0.0 | 0.04 | 17.86 | 0.01 | 2.005 | 4.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.53 | 0.72 | — | 3.4 | 0.007 | 0.85 | 0.0 | 0.04 | 18.29 | 0.01 | 1.758 | 16.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.17 | 0.55 | 0.73 | — | 7755 | 0 | 3 | 362 | 13 | 0 | 0 | logfile |
✔ | 7RX4 | 24724 | 2023-10-06 | 2021-08-21 | 3.8 | 3.99 | — | 4.0 | 0.003 | 0.49 | 0.0 | 0.04 | 13.38 | 0.00 | 1.928 | 12.86 | 0.00 | 0.0 | 100.0 | 0.0 | 6.26 | 0.60 | 0.78 | 1.41 | 3.9 | 0.003 | 0.51 | 0.0 | 0.04 | 16.36 | 0.00 | 2.337 | 5.07 | 1.27 | 0.0 | 100.0 | 0.0 | 6.07 | 0.49 | 0.62 | 0.80 | 0.89 | 13560 | 1740 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL7 | 21816 | 2023-10-16 | 2020-04-18 | 3.8 | 4.18 | — | 3.9 | 0.006 | 0.58 | 0.0 | 0.04 | 14.93 | 0.00 | 2.204 | 8.50 | 0.00 | 1.2 | 98.8 | 0.0 | 3.28 | 0.79 | 0.87 | 2.36 | 3.9 | 0.005 | 0.97 | 0.0 | 0.04 | 17.47 | 0.00 | 2.173 | 14.78 | 2.10 | 0.0 | 100.0 | 0.0 | 4.93 | 1.01 | 0.79 | 0.86 | 1.94 | 34350 | 4350 | 150 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B3P | 15832 | 2023-10-08 | 2022-09-16 | 2.81 | 3.73 | 2.92 | 3.3 | 0.008 | 1.53 | 30.0 | 0.10 | 16.99 | 0.00 | 2.469 | 4.32 | 0.78 | 0.0 | 100.0 | 0.0 | -0.91 | 0.82 | 0.93 | 1.32 | 3.3 | 0.003 | 0.57 | 0.0 | 0.03 | 18.16 | 0.00 | 2.171 | 4.79 | 2.13 | 0.0 | 100.0 | 0.0 | 5.63 | 1.33 | 0.79 | 0.89 | 0.09 | 17620 | 2370 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2023-10-02 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 7Q5A | 13830 | 2023-10-05 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.012 | 1.10 | 0.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 3.99 | 258.0 | 0.21 | 16.66 | 0.02 | 1.952 | 25.67 | 2.65 | 0.0 | 100.0 | 0.0 | 0.76 | 1.64 | 0.67 | 0.86 | 6.20 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 6WL1 | 21815 | 2023-10-07 | 2020-04-17 | 4.0 | 4.02 | — | 4.0 | 0.007 | 0.81 | 0.0 | 0.05 | 7.85 | 0.00 | 2.413 | 3.17 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.71 | 0.85 | — | 4.0 | 0.004 | 0.51 | 0.0 | 0.04 | 16.18 | 0.00 | 2.241 | 6.67 | 0.67 | 0.0 | 100.0 | 0.0 | 6.23 | 0.72 | 0.72 | 0.86 | — | 14612 | 1872 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-10-02 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CZi | 27098 | 2023-10-02 | 2022-05-24 | 2.22 | 2.26 | 2.61 | 2.0 | 0.004 | 0.33 | 0.0 | 0.03 | 14.48 | 0.00 | 2.382 | 6.62 | 0.00 | 0.0 | 100.0 | 0.0 | 2.90 | 0.78 | 0.80 | 1.97 | 2.0 | 0.004 | 0.39 | 0.0 | 0.03 | 15.18 | 0.00 | 2.140 | 5.65 | 0.34 | 0.0 | 100.0 | 0.0 | 5.55 | 0.85 | 0.83 | 0.84 | 1.84 | 2550 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |