Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7LXB	23569	2022-07-03	2021-03-03	3.26	3.63	—	3.7	0.006	0.92	0.0	0.05	16.72	0.00	1.187	23.10	0.58	13.9	85.5	0.6	-2.03	0.76	0.73	1.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54280	6928	32	8	16	0	0	logfile
✘	7DPT	30810	2022-07-04	2020-12-21	2.48	2.64	2.47	2.7	0.006	0.78	0.0	0.05	18.06	0.00	1.378	3.16	1.23	6.0	93.9	0.2	-3.03	0.70	0.80	4.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18052	2228	12	0	24	96	0	logfile
✔	7o1V	12697	2022-07-06	2021-03-30	4.31	3.92	—	4.2	0.025	2.77	1.0	0.13	20.58	0.02	2.207	10.12	0.07	5.4	94.6	0.1	-1.67	0.59	0.81	—	4.1	0.003	0.65	0.0	0.04	17.51	0.00	1.468	14.72	0.00	4.5	95.5	0.0	0.00	0.55	0.60	0.82	—	20914	1869	12	0	120	0	0	logfile
✔	7RSo	24676	2022-07-04	2021-08-11	4.1	4.34	4.12	4.3	0.022	1.82	0.0	0.15	10.61	0.01	2.407	0.99	0.15	1.4	98.6	0.0	0.79	0.75	0.78	—	4.3	0.004	0.72	0.0	0.05	12.77	0.01	2.087	14.17	0.15	4.5	95.5	0.0	-0.39	1.11	0.75	0.80	—	20568	2355	54	0	144	0	0	logfile
✘	7PiJ	13438	2022-07-03	2021-08-20	3.47	4.14	—	4.1	0.015	1.17	0.0	0.05	13.54	0.01	1.166	13.64	0.11	10.6	89.3	0.1	-3.26	0.49	0.51	1.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8194	1068	8	0	0	16	0	logfile
✘	7CUQ	30474	2022-07-03	2020-08-24	2.64	2.91	—	2.9	0.008	0.74	0.0	0.04	13.22	0.01	1.249	4.13	3.42	3.0	96.9	0.1	-4.33	0.50	0.75	4.14	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9834	1199	6	0	9	0	0	logfile
✘	7CUB	30471	2022-07-03	2020-08-22	2.55	2.79	—	2.7	0.008	0.85	0.0	0.05	14.60	0.01	1.245	4.14	4.63	3.8	95.9	0.3	-3.84	0.73	0.89	4.60	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9842	1199	7	0	9	13	0	logfile
✘	7M18	23615	2022-07-03	2021-03-12	3.38	4.09	—	4.1	0.004	0.95	0.0	0.05	16.40	0.01	1.187	23.92	0.28	10.4	89.3	0.3	-2.48	0.74	0.73	0.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54064	6904	32	8	16	0	0	logfile
✘	7LD3	23280	2022-07-03	2021-01-12	3.2	3.49	3.04	3.5	0.006	1.02	0.0	0.06	12.40	0.01	1.223	4.13	0.13	3.3	96.7	0.0	-1.50	0.59	0.82	3.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7016	888	5	0	2	1	0	logfile
✘	7o1C	12695	2022-07-08	2021-03-29	2.6	3.02	2.70	2.4	0.018	1.90	0.0	0.06	14.29	0.01	0.055	6.86	0.04	5.1	94.8	0.1	-1.96	0.80	0.83	3.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	148175	6042	76	4638	489	800	0	logfile
✘	6XEU	22150	2022-07-03	2020-06-13	3.2	3.84	—	3.7	0.008	0.83	4.0	0.06	15.31	0.01	1.398	2.82	2.83	11.3	88.7	0.0	-2.88	0.76	0.88	3.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10544	1312	8	0	16	0	0	logfile
✘	7RX4	24724	2022-07-04	2021-08-21	3.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14012	1798	62	0	0	0	0	logfile
✔	7LF1	23297	2022-07-06	2021-01-15	4.04	4.49	4.10	4.2	0.006	1.07	0.0	0.06	9.39	0.01	1.592	12.30	0.16	12.9	86.7	0.4	-4.16	0.83	0.66	—	4.2	0.003	0.79	0.0	0.05	11.02	0.01	1.428	20.97	0.00	11.1	88.8	0.1	-2.24	1.32	0.86	0.75	—	34518	4548	24	0	12	0	0	logfile
✔	7NiU	12365	2022-07-04	2021-02-14	4.2	3.68	—	3.5	0.008	1.01	0.0	0.05	15.90	0.01	2.110	34.18	1.67	14.7	85.0	0.2	-5.18	0.57	0.58	—	3.5	0.004	0.72	0.0	0.04	14.80	0.01	2.111	15.87	0.18	6.9	93.1	0.0	-1.82	1.64	0.56	0.57	—	15495	2015	6	0	2	0	0	logfile
✘	7o1A	12694	2022-07-08	2021-03-29	2.4	2.81	—	2.3	0.014	1.83	6.0	0.05	13.99	0.01	0.059	5.48	0.04	3.7	96.3	0.0	-2.95	0.86	0.87	3.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	146602	5694	96	4637	476	2026	0	logfile
✘	7oY8	13110	2022-07-05	2021-06-23	2.5	2.51	—	2.6	0.008	0.93	0.0	0.05	15.61	0.01	1.197	0.88	0.21	2.4	97.6	0.0	0.49	0.72	0.78	2.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22902	2293	103	0	68	372	0	logfile
✘	7o19	12693	2022-07-07	2021-03-29	2.9	3.19	2.93	2.6	0.016	1.84	0.0	0.05	14.00	0.01	1.139	6.65	0.04	3.7	96.2	0.1	-1.50	0.82	0.86	3.50	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	145019	5694	74	4635	173	793	0	logfile
✘	7PHP	13424	2022-07-03	2021-08-18	3.47	3.48	—	3.6	0.017	0.90	0.0	0.05	14.25	0.01	2.182	6.66	0.11	7.0	93.0	0.0	-1.50	0.72	0.83	3.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8647	1134	8	0	0	21	0	logfile
✘	7M1Q	23618	2022-07-04	2021-03-14	2.92	3.52	—	3.3	0.003	0.62	0.0	0.04	12.49	0.00	1.187	8.43	0.08	7.6	92.2	0.2	0.03	0.72	0.83	2.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13780	1911	4	0	16	0	0	logfile
✘	7FD8	31536	2022-07-03	2021-07-16	3.8	3.98	3.73	3.6	0.008	1.38	2.0	0.09	11.87	0.00	1.174	5.06	0.61	8.6	91.3	0.1	-2.25	0.73	0.82	2.28	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12152	1528	4	0	6	0	0	logfile

• ← previous
• Page 2 of 392
• next →