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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8J4F | 35975 | 2024-03-15 | 2023-04-19 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12419 | 1446 | 7 | 0 | 30 | 0 | 0 | logfile |
✘ | 8HMP | 34902 | 2024-03-11 | 2022-12-05 | 2.77 | 2.61 | 2.82 | 2.8 | 0.005 | 0.92 | 0.0 | 0.06 | 14.08 | 0.01 | 2.228 | 5.94 | 0.00 | 3.4 | 96.6 | 0.0 | -0.73 | 0.63 | 0.79 | 3.64 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8319 | 1045 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7E1W | 30944 | 2024-03-24 | 2021-02-03 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 42695 | 5132 | 35 | 0 | 59 | 1 | 0 | logfile |
✘ | 7ZTA | 14956 | 2024-03-25 | 2022-05-09 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7RBU | 24402 | 2024-03-10 | 2021-07-06 | 3.7 | 2.38 | — | 2.2 | 0.006 | 0.80 | 0.0 | 0.05 | 12.81 | 0.00 | 2.167 | 6.95 | 0.00 | 9.1 | 90.7 | 0.2 | -2.50 | 0.74 | 0.77 | 4.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4107 | 510 | 6 | 0 | 7 | 0 | 0 | logfile |
✘ | 5Go9 | 9528 | 2024-03-21 | 2016-07-26 | 4.4 | 4.59 | — | 4.4 | 0.020 | 1.79 | 36.0 | 0.11 | 12.27 | 0.01 | 2.185 | 7.55 | 0.88 | 8.7 | 90.7 | 0.6 | -4.90 | 0.78 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 105068 | 13692 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7E1X | 30945 | 2024-03-24 | 2021-02-03 | 2.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 42679 | 5132 | 34 | 0 | 59 | 0 | 0 | logfile |
✘ | 5VFQ | 8664 | 2024-03-20 | 2017-04-09 | 4.2 | 4.40 | — | 4.2 | 0.008 | 1.31 | 5.0 | 0.07 | 11.88 | 0.01 | 2.018 | 11.49 | 0.81 | 10.0 | 89.5 | 0.6 | -4.38 | 0.71 | 0.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101134 | 13040 | 51 | 0 | 5 | 0 | 0 | logfile |
✘ | 7UFT | 26480 | 2024-03-22 | 2022-03-23 | 2.9 | 3.31 | — | 3.2 | 0.007 | 0.74 | 0.0 | 0.05 | 13.89 | 0.00 | 1.910 | 6.47 | 0.94 | 8.9 | 91.1 | 0.0 | -3.81 | 0.74 | 0.88 | 3.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32324 | 4128 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7XF2 | 33168 | 2024-03-11 | 2022-03-31 | 3.73 | 4.88 | 3.77 | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 14.12 | 0.00 | 2.133 | 14.17 | 0.13 | 8.5 | 91.5 | 0.0 | -4.97 | 0.46 | 0.78 | 0.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6591 | 840 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 8D85 | 27247 | 2024-03-11 | 2022-06-07 | 3.81 | 4.26 | 4.04 | 4.2 | 0.003 | 0.53 | 0.0 | 0.04 | 19.55 | 0.00 | 2.357 | 4.77 | 0.00 | 4.1 | 95.8 | 0.1 | -2.45 | 0.68 | 0.64 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7093 | 865 | 10 | 0 | 11 | 0 | 0 | logfile |
✘ | 7Q3L | 13793 | 2024-03-18 | 2021-10-28 | 2.21 | 2.93 | 2.31 | 2.6 | 0.008 | 1.50 | 26.0 | 0.12 | 15.89 | 0.01 | 1.876 | 2.99 | 2.50 | 3.2 | 96.8 | 0.0 | -1.25 | 0.81 | 0.86 | 3.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20470 | 2440 | 16 | 41 | 4 | 180 | 0 | logfile |
✘ | 7Z2Z | 14468 | 2024-03-24 | 2022-03-01 | 3.07 | 2.65 | 3.05 | 2.8 | 0.006 | 0.70 | 0.0 | 0.05 | 18.27 | 0.01 | 2.161 | 10.37 | 1.29 | 8.7 | 91.3 | 0.0 | -1.50 | 0.67 | 0.78 | 2.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 41670 | 5116 | 27 | 44 | 32 | 0 | 0 | logfile |
✘ | 7RBV | 24403 | 2024-03-21 | 2021-07-06 | 3.6 | 3.85 | — | 3.8 | 0.005 | 0.79 | 0.0 | 0.05 | 19.65 | 0.00 | 2.167 | 6.90 | 0.19 | 8.0 | 91.8 | 0.2 | -1.94 | 0.72 | 0.74 | 2.20 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30431 | 3718 | 40 | 0 | 111 | 0 | 0 | logfile |
✘ | 8K7B | 36937 | 2024-03-14 | 2023-07-26 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9496 | 1180 | 4 | 0 | 6 | 0 | 0 | logfile |
✘ | 7UT7 | 26757 | 2024-03-17 | 2022-04-26 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16442 | 1998 | 12 | 0 | 8 | 415 | 0 | logfile |
✘ | 8FCL | 28982 | 2024-03-23 | 2022-12-01 | 3.51 | 3.89 | 3.72 | 3.9 | 0.011 | 0.87 | 0.0 | 0.06 | 12.28 | 0.00 | 2.300 | 0.67 | 0.10 | 1.8 | 98.2 | 0.0 | 0.35 | 0.67 | 0.63 | 1.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36904 | 4667 | 13 | 0 | 12 | 0 | 0 | logfile |
✘ | 8E7S | 27940 | 2024-03-12 | 2022-08-24 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62847 | 7618 | 64 | 0 | 63 | 0 | 0 | logfile |
✘ | 7YVU | 34138 | 2024-03-14 | 2022-08-19 | 3.2 | 2.47 | 3.22 | 2.2 | 0.004 | 0.64 | 0.0 | 0.05 | 14.81 | 0.01 | 2.103 | 6.82 | 0.29 | 5.5 | 94.0 | 0.5 | -0.60 | 0.76 | 0.80 | 3.57 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 6456 | 791 | 4 | 0 | 4 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2024-03-10 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |