Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7CXM	30492	2022-05-14	2020-09-02	2.9	3.58	—	3.3	0.010	1.58	80.0	0.10	18.07	0.01	1.572	20.09	12.89	9.0	90.4	0.6	-4.28	0.83	0.88	3.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21295	2563	12	57	8	0	0	logfile
✘	7AGG	11779	2022-05-12	2020-09-22	3.3	3.68	—	3.6	0.007	0.79	0.0	0.05	13.16	0.01	1.980	6.95	0.00	4.2	95.8	0.0	-1.18	0.83	0.80	3.30	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8252	1056	5	0	0	0	0	logfile
✘	7CWS	30486	2022-05-17	2020-08-31	3.4	3.74	—	3.3	0.008	1.12	10.0	0.07	10.02	0.01	1.462	32.53	0.20	6.8	93.0	0.2	-3.39	0.70	0.56	2.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	36389	4602	33	0	46	0	0	logfile
✘	6X36	22019	2022-05-17	2020-05-21	4.7	4.72	5.52	4.6	0.002	0.53	0.0	0.03	10.40	0.00	2.228	5.93	0.00	2.2	97.8	0.0	0.96	0.76	0.70	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	100164	13692	12	0	1376	0	0	logfile
✘	7JRP	22448	2022-05-17	2020-08-12	3.8	3.87	—	3.9	0.008	0.87	0.0	0.05	15.33	0.01	1.282	11.98	0.11	7.4	92.5	0.1	0.07	0.61	0.85	2.00	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	45166	5472	46	0	57	0	0	logfile
✘	7JRo	22447	2022-05-13	2020-08-12	3.8	3.86	3.82	3.9	0.009	1.03	0.0	0.05	15.90	0.01	1.282	14.56	0.08	9.2	90.8	0.1	-0.46	0.61	0.85	2.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12747	1492	17	0	26	0	0	logfile
✘	7CoY	30420	2022-05-13	2020-08-05	2.5	2.41	2.54	2.5	0.017	1.73	5.0	0.10	14.13	0.01	1.106	11.63	0.90	5.6	94.3	0.1	-3.23	0.57	0.80	3.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	57966	6096	66	0	279	84	0	logfile
✘	7D1T	30547	2022-05-12	2020-09-15	1.95	1.88	1.89	1.9	0.020	1.91	31.0	0.10	18.53	0.02	1.200	3.45	2.40	1.9	97.9	0.2	-0.93	0.77	0.85	6.98	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	52994	5312	108	0	196	2432	0	logfile
✘	7LWQ	23554	2022-05-14	2021-03-01	3.44	3.73	—	3.6	0.013	1.77	6.0	0.09	13.64	0.01	2.529	0.26	0.90	6.5	93.1	0.4	-1.31	0.72	0.71	2.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19190	2425	6	0	23	0	0	logfile
✘	7ARL	11886	2022-05-13	2020-10-25	3.2	3.44	—	3.5	0.003	0.73	0.0	0.05	13.09	0.00	2.378	3.27	0.00	4.6	95.4	0.0	-5.83	0.62	0.73	0.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9467	1256	9	0	6	0	0	logfile
✘	7DX4	30895	2022-05-13	2021-01-18	3.6	3.96	—	3.8	0.007	0.99	0.0	0.06	10.06	0.01	0.766	7.28	0.23	6.0	93.7	0.3	-4.20	0.71	0.79	3.35	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8234	1027	6	0	5	0	0	logfile
✘	7S9Y	24941	2022-05-12	2021-09-21	3.56	3.89	—	3.9	0.007	0.93	0.0	0.05	13.74	0.01	1.241	10.16	0.00	8.2	91.8	0.0	-1.32	0.69	0.82	3.05	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7395	901	1	0	3	0	0	logfile
✘	7R88	24311	2022-05-13	2021-06-26	3.5	3.76	—	3.7	0.002	0.45	0.0	0.04	12.49	0.00	2.274	5.35	1.02	3.5	96.5	0.0	-1.50	0.69	0.85	2.38	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10787	1368	4	0	0	0	0	logfile
✘	7EFC	31083	2022-05-14	2021-03-21	1.7	1.76	1.83	1.9	0.032	3.16	80.0	0.09	15.03	0.02	0.000	3.39	2.15	2.5	96.6	0.8	-0.84	0.73	0.80	6.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20020	2400	20	0	20	780	0	logfile
✘	7LMB	23439	2022-05-14	2021-02-05	3.8	3.98	—	3.9	0.004	0.63	0.0	0.04	17.20	0.00	2.160	11.78	0.06	6.7	93.3	0.0	-3.71	0.77	0.75	1.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18498	1837	9	162	1	0	0	logfile
✘	7D5i	30582	2022-05-12	2020-09-26	2.79	2.96	—	3.0	0.005	0.71	0.0	0.04	13.37	0.00	1.220	6.64	0.00	8.3	91.7	0.0	-1.65	0.65	0.88	3.61	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6232	793	3	0	3	0	0	logfile
✘	7MKL	23898	2022-05-15	2021-04-24	3.2	2.50	—	2.1	0.004	0.82	0.0	0.06	12.45	0.01	2.162	10.30	0.00	2.9	97.1	0.0	0.35	0.64	0.58	0.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25597	3164	23	0	63	0	0	logfile
✘	7M4U	23666	2022-05-12	2021-03-22	2.71	1.78	—	1.6	0.003	0.54	2.0	0.04	14.67	0.00	1.182	4.49	0.20	3.1	96.7	0.2	1.08	0.79	0.76	3.70	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	51764	2386	27	1528	84	191	0	logfile
✘	7MTP	23993	2022-05-01	2021-05-13	2.79	3.30	—	3.4	0.011	1.20	180.0	0.07	9.77	0.01	1.746	18.64	0.22	2.9	96.9	0.2	-2.75	0.67	0.80	4.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	247860	31080	60	0	0	0	0	logfile
✘	7ETo	31301	2022-05-17	2021-05-13	4.0	3.89	—	4.0	0.007	0.94	0.0	0.06	14.66	0.01	2.228	7.32	0.70	6.6	93.4	0.0	-4.12	0.40	0.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	98674	12386	26	0	0	0	0	logfile

• ← previous
• Page 5 of 376
• next →