Table showing results for October 2023

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	6X1A	21994	2023-10-05	2020-05-18	2.5	1.99	2.50	2.6	0.006	0.93	0.0	0.07	15.41	0.00	2.140	14.37	3.79	3.9	96.1	0.0	-3.15	0.51	0.71	2.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10140	1262	5	0	1	23	0	logfile
✘	8H87	34531	2023-10-03	2022-10-21	2.53	2.73	2.50	2.7	0.011	1.55	0.0	0.08	18.62	0.02	2.300	4.49	0.91	2.3	97.7	0.0	-1.32	0.58	0.79	4.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7083	777	6	0	48	147	0	logfile
✘	8EiR	28162	2023-10-03	2022-09-15	2.49	3.15	2.50	3.0	0.005	0.81	0.0	0.05	16.40	0.01	1.960	4.05	2.61	2.2	97.4	0.3	-1.27	0.86	0.84	4.26	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4870	632	4	0	0	0	0	logfile
✘	7UNL	26626	2023-10-05	2022-04-11	2.45	3.35	2.50	3.1	0.003	0.56	0.0	0.04	14.66	0.00	2.143	2.41	1.94	1.1	98.9	0.0	2.30	0.72	0.83	3.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11724	734	6	0	8	120	5900	logfile
✘	8ED0	28026	2023-10-08	2022-09-02	2.72	2.93	2.52	2.9	0.007	0.75	1.0	0.05	14.42	0.01	2.201	6.70	0.18	3.9	95.5	0.6	-2.14	0.75	0.91	5.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16074	2088	6	0	0	0	0	logfile
✘	7YLA	33904	2023-10-10	2022-07-25	2.52	2.04	2.52	1.6	0.006	0.71	0.0	0.04	14.58	0.01	1.980	8.85	0.75	4.3	95.5	0.3	-0.94	0.81	0.81	3.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	125784	3775	36	2994	6	0	32052	logfile
✘	8iHR	35453	2023-10-12	2023-02-23	2.5	2.65	2.53	2.7	0.004	0.67	0.0	0.05	15.87	0.00	2.138	4.14	0.70	2.8	97.2	0.0	-0.52	0.74	0.89	4.49	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24224	3200	16	0	16	0	0	logfile
✘	7NVL	12605	2023-10-07	2021-03-15	2.5	2.63	2.55	2.6	0.005	0.78	0.0	0.05	16.49	0.00	1.915	8.72	1.56	3.2	96.7	0.0	-2.02	0.60	0.73	3.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	66477	8626	50	0	48	27	0	logfile
✘	8AZS	15770	2023-10-04	2022-09-06	2.9	2.78	2.55	2.8	0.011	1.50	0.0	0.12	16.09	0.01	0.017	1346.55	0.00	3.1	96.9	0.0	-1.98	0.27	0.40	5.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9036	1224	36	0	0	0	0	logfile
✘	7LP9	23473	2023-10-10	2021-02-11	2.63	3.37	2.55	3.0	0.010	1.07	0.0	0.20	17.56	0.00	2.040	4.68	0.00	2.7	97.3	0.0	1.57	0.73	0.84	3.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20977	2536	8	0	46	0	0	logfile
✘	8CSR	26968	2023-10-10	2022-05-13	2.54	2.48	2.56	2.6	0.004	0.65	0.0	0.38	14.52	0.01	1.910	2.68	0.00	1.7	98.3	0.0	1.19	0.72	0.78	3.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	69868	6354	42	854	43	46	0	logfile
✘	8C06	16355	2023-10-12	2022-12-16	2.7	2.32	2.57	2.7	0.003	0.76	0.0	0.05	13.59	0.01	2.333	2.28	0.00	5.5	94.5	0.0	-1.51	0.67	0.75	2.13	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25324	3298	8	0	6	0	0	logfile
✘	7TJF	25924	2023-10-10	2022-01-16	2.6	3.06	2.57	2.8	0.005	0.87	0.0	0.05	19.49	0.01	1.795	4.00	1.87	2.1	97.9	0.0	-1.60	0.85	0.89	3.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21125	2327	19	82	6	297	0	logfile
✘	8EEY	28065	2023-10-10	2022-09-07	2.53	2.25	2.57	2.5	0.006	0.88	0.0	0.05	15.16	0.01	1.937	0.37	0.14	1.8	98.1	0.0	0.01	0.60	0.80	4.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20886	2393	6	66	4	0	0	logfile
✘	7TU8	26129	2023-10-19	2022-02-02	2.6	2.05	2.59	2.0	0.011	0.81	0.0	0.05	13.32	0.00	1.874	2.75	0.00	2.8	97.0	0.2	0.45	0.81	0.80	4.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20232	2604	12	0	24	0	0	logfile
✘	8DR4	27670	2023-10-20	2022-07-20	2.45	3.17	2.59	3.0	0.008	0.56	0.0	0.04	18.35	0.00	1.929	2.78	0.91	1.9	98.1	0.0	1.85	0.84	0.85	3.40	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	43471	2600	17	63	8	0	21549	logfile
✘	8B14	15802	2023-10-09	2022-09-09	2.6	2.13	2.61	2.0	0.007	0.68	0.0	0.05	16.80	0.01	2.163	5.79	0.79	2.8	97.2	0.0	0.27	0.80	0.81	5.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18810	1243	3	0	2	0	9112	logfile
✘	8F0A	28754	2023-10-09	2022-11-02	2.6	3.77	2.61	3.4	0.031	1.77	0.0	0.13	9.86	0.01	2.388	0.56	0.00	0.8	99.2	0.0	0.72	0.68	0.66	4.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18060	1212	9	0	0	0	9189	logfile
✘	8CYD	27075	2023-10-14	2022-05-23	2.6	3.24	2.62	3.0	0.002	0.51	0.0	0.04	12.52	0.01	1.930	6.47	0.32	4.9	94.7	0.4	0.04	0.77	0.79	2.24	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28454	3663	6	0	0	0	0	logfile
✘	8H0X	34417	2023-10-12	2022-09-30	2.57	2.80	2.62	2.7	0.008	0.93	0.0	0.06	12.74	0.01	2.257	1.76	1.11	3.3	96.7	0.0	-0.82	0.81	0.86	3.97	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25122	3117	6	0	48	0	0	logfile

• ← previous
• Page 2 of 58
• next →