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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6F0K | 4165 | 2023-05-16 | 2017-11-20 | 3.87 | 3.98 | — | 3.9 | 0.022 | 1.29 | 0.0 | 0.14 | 11.89 | 0.01 | 1.943 | 8.80 | 0.00 | 14.2 | 85.8 | 0.0 | -5.22 | 0.65 | 0.72 | 1.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39868 | 2504 | 10 | 0 | 10 | 0 | 19577 | logfile |
✘ | 7SQ9 | 25380 | 2023-05-07 | 2021-11-04 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15810 | 1876 | 16 | 0 | 18 | 16 | 0 | logfile |
✘ | 6VM2 | 21236 | 2023-05-06 | 2020-01-27 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15355 | 1815 | 15 | 0 | 20 | 0 | 0 | logfile |
✘ | 6QS8 | 4627 | 2023-05-12 | 2019-02-20 | 3.9 | 4.01 | 3.80 | 3.9 | 0.011 | 1.05 | 0.0 | 0.06 | 10.42 | 0.01 | 2.018 | 5.95 | 0.17 | 6.7 | 93.3 | 0.0 | -3.91 | 0.75 | 0.76 | 2.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28875 | 3603 | 13 | 0 | 43 | 0 | 0 | logfile |
✘ | 7RJE | 24486 | 2023-05-04 | 2021-07-20 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 57232 | 3818 | 24 | 0 | 10 | 0 | 27924 | logfile |
✘ | 7SQ7 | 25378 | 2023-05-06 | 2021-11-04 | 2.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15305 | 1852 | 16 | 0 | 13 | 8 | 0 | logfile |
✘ | 6UD3 | 20731 | 2023-05-06 | 2019-09-18 | 3.5 | 4.06 | 3.46 | 3.8 | 0.018 | 1.60 | 0.0 | 0.11 | 11.86 | 0.01 | 2.293 | 7.45 | 0.00 | 4.6 | 95.4 | 0.0 | -1.90 | 0.79 | 0.78 | 1.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14346 | 1765 | 10 | 0 | 6 | 0 | 0 | logfile |
✘ | 6QS7 | 4626 | 2023-05-12 | 2019-02-20 | 3.8 | 3.89 | 3.67 | 3.8 | 0.011 | 1.05 | 0.0 | 0.06 | 10.39 | 0.01 | 2.041 | 7.09 | 0.20 | 7.7 | 92.3 | 0.0 | -3.83 | 0.71 | 0.81 | 2.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28875 | 3603 | 13 | 0 | 43 | 0 | 0 | logfile |
✘ | 6X2L | 22011 | 2023-05-04 | 2020-05-20 | 2.85 | 2.95 | — | 2.9 | 0.009 | 0.96 | 0.0 | 0.06 | 13.68 | 0.01 | 2.078 | 2.99 | 0.00 | 2.5 | 97.5 | 0.0 | -6.46 | 0.64 | 0.88 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9396 | 1233 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 6X1A | 21994 | 2023-05-05 | 2020-05-18 | 2.5 | 1.99 | 2.50 | 2.6 | 0.006 | 0.93 | 0.0 | 0.07 | 15.41 | 0.00 | 2.140 | 14.37 | 3.79 | 3.9 | 96.1 | 0.0 | -3.15 | 0.51 | 0.71 | 2.96 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10140 | 1262 | 5 | 0 | 1 | 23 | 0 | logfile |
✘ | 5GAH | 8004 | 2023-05-15 | 2015-11-26 | 3.8 | 3.97 | — | 3.9 | 0.008 | 1.10 | 0.0 | 0.05 | 15.97 | 0.01 | 1.737 | 8.30 | 11.31 | 3.3 | 96.7 | 0.1 | -3.33 | 0.73 | 0.85 | 1.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94027 | 3595 | 46 | 3049 | 473 | 0 | 0 | logfile |
✘ | 7XLB | 33276 | 2023-05-08 | 2022-04-21 | 3.44 | 3.67 | 3.47 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 19.23 | 0.01 | 2.236 | 8.13 | 0.19 | 7.7 | 92.3 | 0.0 | -3.68 | 0.63 | 0.71 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19138 | 2352 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 6H68 | 0147 | 2023-05-15 | 2018-07-26 | 4.6 | 4.70 | — | 4.6 | 0.005 | 0.84 | 0.0 | 0.05 | 11.32 | 0.01 | 2.243 | 6.67 | 0.05 | 7.3 | 92.7 | 0.0 | -3.73 | 0.72 | 0.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37103 | 4497 | 22 | 67 | 6 | 0 | 0 | logfile |
✘ | 7X08 | 32920 | 2023-05-15 | 2022-02-21 | 2.7 | 2.78 | — | 2.8 | 0.009 | 0.96 | 0.0 | 0.10 | 17.17 | 0.01 | 1.910 | 14.34 | 10.68 | 8.4 | 90.6 | 0.9 | -2.76 | 0.63 | 0.76 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36396 | 4572 | 36 | 0 | 81 | 0 | 0 | logfile |
✘ | 8F1K | 28791 | 2023-05-13 | 2022-11-05 | 2.8 | 3.72 | 2.83 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 14.90 | 0.00 | 2.130 | 4.40 | 1.30 | 2.3 | 97.7 | 0.0 | 0.58 | 0.88 | 0.82 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30854 | 3689 | 14 | 95 | 3 | 10 | 0 | logfile |
✘ | 5W68 | 8778 | 2023-05-16 | 2017-06-16 | 3.3 | 3.84 | — | 4.0 | 0.006 | 0.89 | 0.0 | 0.06 | 10.33 | 0.01 | 2.206 | 8.50 | 0.69 | 8.5 | 91.5 | 0.0 | -5.31 | 0.73 | 0.78 | 2.37 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39390 | 5250 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 7CZY | 30521 | 2023-05-13 | 2020-09-09 | 3.3 | 3.38 | — | 3.3 | 0.011 | 1.02 | 0.0 | 0.07 | 17.97 | 0.01 | 1.865 | 25.79 | 12.01 | 10.3 | 87.0 | 2.6 | -3.80 | 0.62 | 0.70 | 1.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31186 | 3880 | 33 | 0 | 76 | 0 | 0 | logfile |
✘ | 7KiF | 22886 | 2023-05-12 | 2020-10-23 | 2.94 | 3.78 | — | 3.6 | 0.009 | 0.87 | 0.0 | 0.05 | 18.07 | 0.01 | 1.489 | 4.33 | 6.85 | 7.1 | 92.9 | 0.0 | -2.80 | 0.82 | 0.84 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30322 | 3592 | 13 | 118 | 4 | 0 | 0 | logfile |
✘ | 7XiC | 33202 | 2023-05-12 | 2022-04-12 | 3.3 | 3.72 | 3.48 | 3.6 | 0.009 | 1.14 | 0.0 | 0.08 | 11.36 | 0.01 | 1.933 | 11.05 | 1.40 | 5.6 | 92.5 | 1.8 | -2.01 | 0.67 | 0.65 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29941 | 3706 | 31 | 0 | 71 | 0 | 0 | logfile |
✘ | 7SCB | 25032 | 2023-05-15 | 2021-09-27 | 2.5 | 3.49 | 2.56 | 3.0 | 0.007 | 1.51 | 3.0 | 0.08 | 17.27 | 0.02 | 2.465 | 3.44 | 2.69 | 3.6 | 96.2 | 0.2 | -4.74 | 0.88 | 0.84 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37229 | 4743 | 54 | 0 | 25 | 0 | 0 | logfile |