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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6oG3 | 20051 | 2024-01-17 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.005 | 1.11 | 0.0 | 0.00 | 8.01 | 0.00 | 2.615 | 51.00 | 0.00 | 13.0 | 87.0 | 0.0 | -1.64 | 2.16 | 0.67 | 0.87 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2024-01-18 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.004 | 1.01 | 0.0 | 0.00 | 4.97 | 0.00 | 2.503 | 6.53 | 0.00 | 18.1 | 81.7 | 0.2 | -3.27 | 1.81 | 0.85 | 0.83 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Y | 24264 | 2024-01-18 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.81 | 0.00 | 2.550 | 7.73 | 0.00 | 18.2 | 81.3 | 0.5 | -4.24 | 2.61 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DZW | 30915 | 2024-01-20 | 2021-01-26 | 3.45 | 4.19 | 3.55 | 3.3 | 0.019 | 2.27 | 0.0 | 0.00 | 4.81 | 0.01 | 2.240 | 2.28 | 0.00 | 5.1 | 93.3 | 1.6 | -1.27 | 0.44 | 0.25 | — | 3.3 | 0.003 | 0.81 | 0.0 | 0.00 | 4.68 | 0.00 | 2.178 | 3.51 | 0.00 | 11.9 | 88.0 | 0.1 | -2.05 | 1.99 | 0.77 | 0.73 | — | 13452 | 3363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9Q | 24259 | 2024-01-17 | 2021-06-18 | 4.6 | 4.92 | — | 2.3 | 0.002 | 0.88 | 0.0 | 0.00 | 5.65 | 0.00 | 2.600 | 0.00 | 0.00 | 8.9 | 90.3 | 0.8 | -1.59 | 0.79 | 0.69 | — | 2.5 | 0.003 | 1.00 | 0.0 | 0.00 | 5.05 | 0.00 | 2.580 | 6.76 | 0.00 | 12.3 | 86.7 | 0.9 | -4.51 | 2.40 | 0.85 | 0.81 | — | 6945 | 2315 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iQF | 35660 | 2024-01-20 | 2023-03-16 | 4.6 | 4.96 | 4.72 | 4.5 | 0.003 | 0.63 | 0.0 | 0.00 | 4.93 | 0.00 | 1.995 | 4.78 | 0.00 | 4.2 | 95.8 | 0.0 | -0.27 | 0.79 | 0.61 | — | 4.5 | 0.003 | 0.79 | 0.0 | 0.00 | 4.63 | 0.00 | 2.244 | 5.74 | 0.00 | 10.4 | 89.6 | 0.0 | -2.39 | 3.18 | 0.85 | 0.79 | — | 9072 | 2268 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TAU | 41142 | 2024-01-17 | 2023-06-27 | 3.5 | 3.03 | 3.36 | 1.8 | 0.006 | 0.79 | 0.0 | 0.00 | 7.52 | 0.01 | 2.188 | 4.55 | 0.00 | 2.1 | 97.9 | 0.0 | -2.34 | 0.73 | 0.66 | — | 2.2 | 0.004 | 0.74 | 0.0 | 0.00 | 4.93 | 0.00 | 2.010 | 14.56 | 0.00 | 15.9 | 84.1 | 0.0 | -2.27 | 0.69 | 0.78 | 0.73 | — | 54106 | 9002 | 25 | 0 | 4 | 0 | 18087 | logfile |
✔ | 6TNG | 10532 | 2024-01-18 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.00 | 6.39 | 0.00 | 2.200 | 10.87 | 0.00 | 22.8 | 77.1 | 0.1 | -3.08 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2024-01-17 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 8.08 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 0.99 | 0.0 | 0.02 | 6.66 | 0.00 | 2.225 | 16.71 | 0.00 | 11.5 | 88.3 | 0.2 | -3.14 | 5.69 | 0.84 | 0.64 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 8E2J | 27838 | 2024-01-17 | 2022-08-15 | 3.44 | 3.67 | 3.24 | 3.4 | 0.003 | 0.63 | 0.0 | 0.03 | 15.86 | 0.01 | 2.271 | 3.43 | 2.70 | 2.3 | 97.7 | 0.0 | -0.36 | 0.44 | 0.67 | 0.61 | 3.4 | 0.003 | 0.47 | 0.0 | 0.02 | 17.53 | 0.00 | 2.034 | 11.09 | 3.72 | 1.5 | 98.5 | 0.0 | 3.73 | 1.67 | 0.45 | 0.67 | 0.86 | 6012 | 346 | 4 | 0 | 114 | 0 | 2694 | logfile |
✔ | 6oFG | 20045 | 2024-01-19 | 2019-03-29 | 2.9 | 3.01 | — | 3.0 | 0.008 | 0.75 | 0.0 | 0.04 | 10.04 | 0.01 | 2.263 | 5.31 | 0.00 | 3.9 | 96.1 | 0.0 | -6.09 | 0.65 | 0.85 | 4.64 | 3.0 | 0.002 | 0.52 | 0.0 | 0.03 | 14.16 | 0.00 | 2.133 | 7.52 | 4.02 | 3.4 | 96.6 | 0.0 | 5.02 | 0.52 | 0.66 | 0.87 | 3.09 | 10980 | 1404 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oTT | 17184 | 2024-01-19 | 2023-04-21 | 3.3 | 3.86 | 3.31 | 3.4 | 0.005 | 0.77 | 0.0 | 0.05 | 24.30 | 0.01 | 2.513 | 1.15 | 0.16 | 1.3 | 98.7 | 0.0 | 1.04 | 0.89 | 0.82 | 2.67 | 3.4 | 0.004 | 0.65 | 2.0 | 0.03 | 26.84 | 0.00 | 2.176 | 8.11 | 1.59 | 2.3 | 97.7 | 0.0 | 3.62 | 0.79 | 0.91 | 0.89 | 2.17 | 12973 | 859 | 17 | 288 | 8 | 0 | 0 | logfile |
✔ | 8E36 | 27858 | 2024-01-19 | 2022-08-16 | 2.38 | 3.00 | 2.65 | 2.8 | 0.006 | 0.57 | 0.0 | 0.02 | 22.78 | 0.02 | 1.934 | 2.28 | 0.32 | 4.2 | 95.8 | 0.0 | 1.12 | 0.72 | 0.90 | 4.41 | 2.8 | 0.005 | 0.60 | 0.0 | 0.03 | 22.67 | 0.01 | 1.922 | 4.09 | 1.27 | 5.2 | 94.7 | 0.1 | 0.11 | 0.86 | 0.70 | 0.89 | 5.04 | 115712 | 1179 | 11 | 3015 | 1 | 0 | 41809 | logfile |
✔ | 7Q65 | 13852 | 2024-01-17 | 2021-11-05 | 3.32 | 2.96 | 3.26 | 3.3 | 0.016 | 1.56 | 0.0 | 0.10 | 10.10 | 0.01 | 2.159 | 3.45 | 8.33 | 10.5 | 89.5 | 0.0 | -5.74 | 0.64 | 0.85 | 4.16 | 3.3 | 0.005 | 0.68 | 0.0 | 0.03 | 13.83 | 0.00 | 2.082 | 12.37 | 10.76 | 9.1 | 90.9 | 0.0 | -5.14 | 0.65 | 0.57 | 0.84 | 4.36 | 6204 | 880 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8C92 | 16499 | 2024-01-17 | 2023-01-21 | 3.79 | 4.24 | 4.02 | 3.8 | 0.002 | 0.38 | 0.0 | 0.03 | 21.88 | 0.00 | 1.872 | 5.69 | 0.00 | 4.5 | 95.4 | 0.1 | 0.46 | 0.83 | 0.79 | 1.60 | 3.8 | 0.004 | 0.58 | 0.0 | 0.03 | 22.52 | 0.00 | 2.005 | 17.56 | 4.18 | 7.7 | 92.3 | 0.0 | -1.06 | 0.56 | 0.84 | 0.84 | 1.79 | 53489 | 1700 | 17 | 1873 | 0 | 0 | 0 | logfile |
✔ | 8ETV | 28600 | 2024-01-18 | 2022-10-17 | 3.16 | 3.01 | 3.36 | 2.0 | 0.006 | 0.87 | 0.0 | 0.05 | 28.21 | 0.01 | 2.305 | 2.83 | 0.00 | 2.3 | 97.7 | 0.0 | -0.99 | 0.80 | 0.77 | 1.76 | 2.0 | 0.004 | 0.63 | 0.0 | 0.03 | 28.75 | 0.00 | 2.106 | 12.78 | 4.35 | 2.0 | 98.0 | 0.0 | 2.14 | 0.45 | 0.81 | 0.80 | 1.23 | 8682 | 524 | 8 | 220 | 0 | 0 | 0 | logfile |
✔ | 6oFE | 20043 | 2024-01-19 | 2019-03-29 | 3.61 | 3.70 | — | 3.6 | 0.006 | 0.63 | 0.0 | 0.04 | 10.07 | 0.01 | 2.325 | 1.57 | 0.00 | 5.3 | 94.7 | 0.0 | -6.24 | 0.64 | 0.85 | 2.72 | 3.6 | 0.003 | 0.80 | 1.0 | 0.03 | 16.13 | 0.00 | 2.124 | 6.04 | 2.00 | 4.1 | 95.9 | 0.0 | 3.67 | 0.56 | 0.65 | 0.86 | 1.28 | 12220 | 1560 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E2H | 27836 | 2024-01-19 | 2022-08-15 | 2.3 | 2.41 | 2.27 | 2.4 | 0.003 | 0.60 | 0.0 | 0.03 | 15.28 | 0.00 | 1.980 | 6.85 | 0.52 | 1.1 | 98.9 | 0.0 | 1.61 | 0.65 | 0.82 | 4.36 | 2.4 | 0.004 | 0.58 | 0.0 | 0.03 | 15.94 | 0.00 | 1.971 | 7.33 | 2.95 | 1.0 | 99.0 | 0.0 | 2.70 | 0.93 | 0.65 | 0.83 | 4.00 | 10412 | 656 | 1 | 0 | 0 | 40 | 5280 | logfile |
✔ | 7Z4L | 14501 | 2024-01-20 | 2022-03-04 | 2.54 | 3.13 | 2.76 | 3.0 | 0.005 | 0.53 | 0.0 | 0.04 | 17.00 | 0.00 | 1.780 | 8.74 | 2.83 | 2.3 | 97.7 | 0.0 | 0.38 | 0.80 | 0.88 | 4.10 | 3.0 | 0.003 | 0.51 | 0.0 | 0.03 | 18.08 | 0.00 | 1.903 | 9.42 | 1.66 | 1.9 | 98.1 | 0.0 | 1.20 | 0.51 | 0.78 | 0.87 | 3.69 | 13823 | 1337 | 6 | 136 | 3 | 6 | 0 | logfile |
✔ | 8CXM | 27060 | 2024-01-18 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.50 | 0.0 | 0.03 | 16.21 | 0.00 | 2.127 | 6.46 | 1.07 | 4.1 | 95.9 | 0.0 | 4.80 | 1.14 | 0.57 | 0.88 | 1.43 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |