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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7A2G | 11624 | 2024-01-20 | 2020-08-17 | 4.1 | 6.36 | 4.20 | 6.0 | 0.006 | 0.86 | 0.0 | 0.04 | 15.22 | 0.01 | 1.869 | 47.63 | 0.49 | 16.3 | 83.4 | 0.2 | -5.55 | 0.86 | 0.78 | — | 6.0 | 0.003 | 0.76 | 0.0 | 0.04 | 14.41 | 0.00 | 2.028 | 28.62 | 0.00 | 11.4 | 88.6 | 0.0 | -1.91 | 0.72 | 0.86 | 0.79 | — | 13408 | 1680 | 12 | 0 | 4 | 4 | 0 | logfile |
✔ | 6V05 | 20969 | 2024-01-20 | 2019-11-18 | 4.1 | 4.20 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.05 | 13.87 | 0.00 | 2.054 | 9.26 | 0.75 | 3.6 | 96.3 | 0.1 | -2.86 | 0.70 | 0.79 | — | 4.1 | 0.003 | 0.64 | 0.0 | 0.04 | 13.32 | 0.00 | 2.193 | 8.92 | 0.00 | 4.4 | 95.6 | 0.0 | -0.29 | 1.07 | 0.70 | 0.76 | — | 13705 | 1884 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Ji1 | 9832 | 2024-01-20 | 2019-02-19 | 4.1 | 4.20 | — | 4.1 | 0.010 | 1.26 | 0.0 | 0.06 | 11.77 | 0.01 | 2.250 | 7.50 | 0.57 | 11.2 | 83.5 | 5.3 | -4.78 | 0.61 | 0.71 | — | 4.1 | 0.003 | 0.75 | 0.0 | 0.04 | 12.66 | 0.01 | 2.052 | 10.58 | 0.00 | 5.6 | 93.8 | 0.7 | -1.07 | 0.89 | 0.56 | 0.69 | — | 13992 | 1848 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NXD | 12637 | 2024-01-19 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 14.20 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.003 | 0.78 | 0.0 | 0.05 | 11.16 | 0.00 | 1.951 | 22.24 | 0.00 | 5.7 | 94.3 | 0.0 | -1.10 | 1.48 | 0.89 | 0.72 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |
✔ | 6QNo | 4598 | 2024-01-19 | 2019-02-11 | 4.38 | 4.65 | — | 4.4 | 0.010 | 1.25 | 0.0 | 0.07 | 11.76 | 0.01 | 2.227 | 12.05 | 1.65 | 11.6 | 88.4 | 0.0 | -3.96 | 0.80 | 0.75 | — | 4.4 | 0.003 | 0.70 | 0.0 | 0.04 | 12.21 | 0.00 | 2.145 | 14.48 | 0.26 | 6.8 | 93.2 | 0.0 | -1.56 | 0.75 | 0.79 | 0.74 | — | 10429 | 1332 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PTY | 13643 | 2024-01-20 | 2021-09-27 | 4.63 | 5.10 | — | 4.5 | 0.003 | 0.68 | 0.0 | 0.04 | 13.76 | 0.00 | 2.199 | 25.20 | 0.00 | 10.9 | 89.1 | 0.0 | -1.41 | 0.88 | 0.76 | — | 4.5 | 0.002 | 0.64 | 0.0 | 0.04 | 13.81 | 0.00 | 2.187 | 15.77 | 0.00 | 7.5 | 92.5 | 0.0 | -0.69 | 0.40 | 0.89 | 0.77 | — | 13433 | 1715 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6T7D | 10394 | 2024-01-18 | 2019-10-21 | 4.4 | 4.45 | 4.29 | 4.1 | 0.005 | 0.86 | 0.0 | 0.05 | 32.58 | 0.01 | 2.107 | 2.55 | 0.00 | 2.0 | 98.0 | 0.0 | -2.34 | 0.86 | 0.77 | — | 4.1 | 0.004 | 0.68 | 0.0 | 0.03 | 32.05 | 0.00 | 2.158 | 13.41 | 0.00 | 5.0 | 95.0 | 0.0 | 2.76 | 0.73 | 0.87 | 0.83 | — | 8209 | 853 | 11 | 234 | 0 | 0 | 0 | logfile |
✔ | 6BF8 | 7092 | 2024-01-20 | 2017-10-26 | 4.2 | 4.69 | 4.96 | 7.4 | 0.007 | 1.21 | 0.0 | 0.06 | 11.02 | 0.01 | 2.252 | 7.53 | 0.00 | 3.8 | 96.2 | 0.0 | -4.13 | 0.80 | 0.71 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 12.58 | 0.00 | 2.122 | 23.08 | 0.00 | 7.5 | 92.5 | 0.0 | -1.12 | 2.33 | 0.80 | 0.72 | — | 15412 | 1888 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R0J | 14223 | 2024-01-17 | 2022-02-02 | 4.23 | 4.64 | 4.43 | 4.4 | 0.008 | 1.03 | 0.0 | 0.05 | 13.44 | 0.01 | 2.029 | 37.19 | 0.20 | 8.8 | 91.2 | 0.0 | -0.99 | 0.76 | 0.79 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.05 | 13.54 | 0.00 | 2.057 | 35.58 | 0.00 | 9.0 | 91.0 | 0.0 | -1.45 | 0.59 | 0.76 | 0.80 | — | 4669 | 596 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KY9 | 23072 | 2024-01-19 | 2020-12-07 | 4.05 | 4.67 | — | 4.5 | 0.004 | 1.14 | 0.0 | 0.05 | 13.34 | 0.00 | 2.206 | 15.79 | 0.00 | 8.3 | 91.7 | 0.0 | -1.25 | 0.67 | 0.71 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.04 | 13.28 | 0.00 | 2.152 | 17.05 | 0.00 | 7.8 | 92.2 | 0.0 | -1.05 | 0.44 | 0.68 | 0.73 | — | 10354 | 1275 | 7 | 0 | 14 | 0 | 0 | logfile |
✘ | 6VDK | 21151 | 2024-01-19 | 2019-12-27 | 4.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12309 | 1274 | 14 | 104 | 6 | 0 | 0 | logfile |
✘ | 6QEL | 4537 | 2024-01-19 | 2019-01-08 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64816 | 4092 | 24 | 0 | 24 | 0 | 32302 | logfile |
✔ | 7V27 | 31638 | 2024-01-17 | 2021-08-07 | 4.18 | 4.43 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 11.75 | 0.00 | 2.229 | 9.54 | 0.00 | 9.2 | 90.8 | 0.0 | -4.40 | 0.85 | 0.80 | — | 4.2 | 0.004 | 0.70 | 0.0 | 0.05 | 12.04 | 0.00 | 2.152 | 20.34 | 0.00 | 11.1 | 88.9 | 0.0 | -2.53 | 0.76 | 0.86 | 0.82 | — | 3252 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2024-01-17 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DTW | 30856 | 2024-01-19 | 2021-01-06 | 4.5 | 4.74 | — | 3.6 | 0.008 | 1.01 | 0.0 | 0.06 | 13.83 | 0.01 | 2.267 | 9.20 | 0.00 | 10.3 | 89.7 | 0.0 | -4.26 | 0.71 | 0.78 | — | 3.7 | 0.002 | 0.59 | 0.0 | 0.05 | 12.75 | 0.00 | 2.217 | 8.04 | 0.00 | 7.7 | 92.3 | 0.0 | -0.98 | 0.56 | 0.71 | 0.79 | — | 10250 | 1556 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 8A64 | 15205 | 2024-01-17 | 2022-06-16 | 4.6 | 7.63 | 4.66 | 4.6 | 0.008 | 0.86 | 0.0 | 0.06 | 10.17 | 0.01 | 2.112 | 20.40 | 0.00 | 5.8 | 94.2 | 0.0 | -1.55 | 0.91 | 0.78 | — | 4.6 | 0.003 | 0.66 | 0.0 | 0.04 | 5.25 | 0.00 | 2.057 | 16.59 | 0.00 | 8.8 | 91.2 | 0.0 | -0.64 | 1.80 | 0.91 | 0.78 | — | 6737 | 1354 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7K5B | 22679 | 2024-01-20 | 2020-09-16 | 4.5 | 4.62 | — | 3.9 | 0.018 | 1.93 | 50.0 | 0.10 | 12.82 | 0.01 | 0.384 | 37.45 | 2.43 | 4.6 | 94.6 | 0.8 | -0.04 | 0.66 | 0.56 | — | 4.0 | 0.007 | 0.60 | 0.0 | 0.04 | 12.51 | 0.00 | 1.795 | 63.05 | 0.01 | 4.3 | 95.4 | 0.3 | 1.54 | 2.19 | 0.74 | 0.79 | — | 119573 | 15602 | 21 | 0 | 18 | 0 | 156 | logfile |
✔ | 7DTU | 30854 | 2024-01-19 | 2021-01-06 | 4.4 | 4.54 | — | 3.7 | 0.006 | 0.90 | 0.0 | 0.06 | 14.69 | 0.01 | 2.277 | 6.85 | 0.00 | 9.4 | 90.6 | 0.0 | -3.95 | 0.68 | 0.79 | — | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 12.80 | 0.00 | 2.188 | 10.88 | 0.00 | 6.3 | 93.7 | 0.0 | -0.41 | 1.09 | 0.68 | 0.80 | — | 10846 | 1558 | 8 | 0 | 14 | 0 | 0 | logfile |
✘ | 6K7M | 9941 | 2024-01-19 | 2019-06-07 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10591 | 1307 | 5 | 0 | 9 | 0 | 0 | logfile |
✔ | 8DMF | 27535 | 2024-01-17 | 2022-07-08 | 4.0 | 4.71 | 3.73 | 4.1 | 0.003 | 0.64 | 0.0 | 0.05 | 14.28 | 0.00 | 1.977 | 13.96 | 0.00 | 5.0 | 95.0 | 0.0 | -0.20 | 0.81 | 0.83 | — | 4.1 | 0.005 | 0.73 | 0.0 | 0.04 | 16.01 | 0.00 | 1.812 | 21.12 | 1.14 | 7.4 | 92.6 | 0.0 | -0.69 | 0.44 | 0.82 | 0.84 | — | 5670 | 718 | 1 | 0 | 2 | 0 | 0 | logfile |