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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VXD | 32176 | 2023-07-14 | 2021-11-12 | 4.0 | 4.60 | — | 4.2 | 0.003 | 0.50 | 0.0 | 0.04 | 7.89 | 0.00 | 2.091 | 7.52 | 0.03 | 4.0 | 95.9 | 0.2 | -2.30 | 0.70 | 0.65 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 14.17 | 0.00 | 2.102 | 16.36 | 0.45 | 4.0 | 96.0 | 0.0 | -0.78 | 1.63 | 0.74 | 0.74 | — | 30194 | 3829 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E2i | 30958 | 2023-07-05 | 2021-02-05 | 4.07 | 4.31 | — | 4.1 | 0.006 | 0.82 | 0.0 | 0.05 | 14.31 | 0.00 | 2.056 | 20.89 | 0.00 | 11.7 | 88.2 | 0.1 | -4.32 | 0.62 | 0.79 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.04 | 14.31 | 0.00 | 2.147 | 15.65 | 0.00 | 10.3 | 89.7 | 0.0 | -1.49 | 1.29 | 0.60 | 0.77 | — | 8569 | 1058 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 7BQT | 30155 | 2023-07-17 | 2020-03-25 | 4.8 | 4.89 | — | 4.8 | 0.006 | 1.07 | 0.0 | 0.06 | 15.96 | 0.01 | 2.230 | 11.08 | 0.66 | 6.3 | 93.7 | 0.0 | -4.15 | 0.57 | 0.79 | — | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 14.20 | 0.01 | 2.011 | 22.93 | 0.00 | 6.9 | 93.1 | 0.0 | -2.67 | 1.94 | 0.55 | 0.78 | — | 39180 | 4860 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 7E32 | 30974 | 2023-07-04 | 2021-02-07 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8797 | 1117 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PD8 | 13331 | 2023-07-04 | 2021-08-04 | 4.2 | 4.36 | — | 4.2 | 0.009 | 1.08 | 0.0 | 0.05 | 15.65 | 0.01 | 2.003 | 34.24 | 1.09 | 11.2 | 88.8 | 0.0 | -4.82 | 0.59 | 0.78 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 14.55 | 0.00 | 2.189 | 16.17 | 0.00 | 4.6 | 95.4 | 0.0 | -0.36 | 1.45 | 0.58 | 0.73 | — | 7642 | 970 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NJX | 12426 | 2023-07-08 | 2021-02-17 | 4.32 | 4.37 | — | 4.1 | 0.003 | 0.52 | 0.0 | 0.04 | 14.39 | 0.00 | 2.028 | 13.09 | 0.00 | 5.8 | 94.2 | 0.0 | 1.56 | 0.60 | 0.76 | — | 4.2 | 0.003 | 0.56 | 0.0 | 0.04 | 14.32 | 0.00 | 1.947 | 13.70 | 0.00 | 3.5 | 96.5 | 0.0 | 3.76 | 0.49 | 0.60 | 0.76 | — | 16426 | 1118 | 12 | 0 | 0 | 0 | 8337 | logfile |
✘ | 6G2H | 4343 | 2023-07-18 | 2018-03-23 | 4.6 | 4.69 | — | 4.5 | 0.013 | 1.94 | 46.0 | 0.11 | 13.54 | 0.01 | 1.921 | 14.05 | 2.29 | 8.3 | 91.0 | 0.7 | -3.04 | 0.79 | 0.65 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 103896 | 6454 | 6 | 0 | 0 | 0 | 51852 | logfile |
✔ | 7RZA | 24756 | 2023-07-13 | 2021-08-27 | 4.26 | 4.24 | — | 4.2 | 0.007 | 0.98 | 0.0 | 0.05 | 11.12 | 0.01 | 2.247 | 4.48 | 0.53 | 4.3 | 95.7 | 0.0 | -4.39 | 0.70 | 0.74 | — | 4.2 | 0.003 | 0.63 | 0.0 | 0.04 | 12.35 | 0.00 | 2.153 | 10.00 | 0.07 | 4.5 | 95.5 | 0.0 | -0.12 | 1.26 | 0.71 | 0.75 | — | 27850 | 3532 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7SCY | 25042 | 2023-07-11 | 2021-09-29 | 4.1 | 6.14 | — | 5.6 | 0.014 | 1.93 | 1.0 | 0.09 | 27.69 | 0.04 | 2.508 | 0.26 | 0.56 | 2.8 | 97.2 | 0.0 | -0.81 | 0.82 | 0.67 | — | 5.5 | 0.009 | 0.77 | 0.0 | 0.05 | 27.61 | 0.01 | 1.778 | 29.96 | 0.00 | 5.4 | 94.6 | 0.0 | -1.01 | 1.09 | 0.87 | 0.79 | — | 23206 | 850 | 11 | 294 | 0 | 0 | 10436 | logfile |
✔ | 6HV8 | 0287 | 2023-07-05 | 2018-10-10 | 4.4 | 4.51 | — | 4.4 | 0.009 | 1.62 | 2.0 | 0.08 | 10.20 | 0.01 | 1.472 | 8.97 | 1.31 | 22.1 | 77.3 | 0.6 | -4.84 | 0.74 | 0.72 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.05 | 12.78 | 0.00 | 2.083 | 14.58 | 0.00 | 14.2 | 85.8 | 0.0 | -2.84 | 1.02 | 0.74 | 0.71 | — | 9206 | 1184 | 2 | 0 | 2 | 0 | 0 | logfile |
✘ | 6RHZ | 4883 | 2023-07-15 | 2019-04-23 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 53055 | 2783 | 20 | 0 | 193 | 0 | 21167 | logfile |
✔ | 6iXH | 9747 | 2023-07-20 | 2018-12-10 | 4.0 | 4.11 | — | 4.0 | 0.010 | 1.11 | 0.0 | 0.06 | 15.28 | 0.01 | 2.228 | 6.64 | 0.60 | 7.6 | 92.0 | 0.4 | -4.89 | 0.84 | 0.87 | — | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 16.65 | 0.00 | 2.151 | 12.39 | 0.58 | 6.3 | 93.6 | 0.1 | -1.91 | 0.66 | 0.84 | 0.86 | — | 52280 | 6785 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TFo | 25878 | 2023-07-13 | 2022-01-06 | 4.1 | 3.83 | — | 3.8 | 0.006 | 0.74 | 0.0 | 0.05 | 13.26 | 0.01 | 2.118 | 16.68 | 0.21 | 8.9 | 91.1 | 0.0 | -1.50 | 0.74 | 0.73 | — | 3.7 | 0.004 | 0.68 | 0.0 | 0.05 | 13.52 | 0.00 | 2.114 | 14.42 | 0.00 | 8.1 | 91.8 | 0.0 | -1.20 | 0.73 | 0.74 | 0.76 | — | 17774 | 2283 | 20 | 0 | 21 | 0 | 0 | logfile |
✘ | 6JSi | 9882 | 2023-07-06 | 2019-04-08 | 4.7 | 4.70 | — | 4.6 | 0.007 | 1.48 | 0.0 | 0.06 | 15.33 | 0.01 | 2.231 | 10.68 | 2.42 | 23.2 | 72.3 | 4.5 | -6.05 | 0.64 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62820 | 5844 | 9 | 0 | 4044 | 0 | 0 | logfile |
✔ | 6G4W | 4349 | 2023-07-19 | 2018-03-28 | 4.5 | 5.22 | — | 4.4 | 0.006 | 1.11 | 2.0 | 0.07 | 21.52 | 0.01 | 0.760 | 5.05 | 0.00 | 8.2 | 91.5 | 0.3 | -3.51 | 0.65 | 0.51 | — | 4.3 | 0.005 | 0.82 | 0.0 | 0.04 | 23.66 | 0.00 | 1.961 | 14.72 | 0.00 | 10.8 | 89.1 | 0.1 | -0.96 | 2.48 | 0.87 | 0.61 | — | 45223 | 4589 | 31 | 1563 | 768 | 0 | 0 | logfile |
✔ | 8AVG | 15682 | 2023-07-07 | 2022-08-26 | 4.01 | 3.61 | 3.84 | 3.5 | 0.003 | 0.70 | 0.0 | 0.05 | 14.67 | 0.00 | 2.189 | 13.04 | 0.07 | 9.3 | 90.5 | 0.2 | -2.48 | 0.79 | 0.73 | — | 3.5 | 0.002 | 0.57 | 0.0 | 0.05 | 14.67 | 0.00 | 2.105 | 10.32 | 0.07 | 7.7 | 92.3 | 0.1 | -2.17 | 0.30 | 0.79 | 0.73 | — | 13746 | 1732 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 6QXM | 4669 | 2023-07-17 | 2019-03-07 | 4.1 | 2.35 | — | 3.5 | 0.008 | 1.25 | 0.0 | 0.06 | 18.91 | 0.01 | 2.333 | 6.84 | 8.63 | 9.3 | 90.7 | 0.0 | -4.78 | 0.68 | 0.67 | — | 3.0 | 0.003 | 0.66 | 0.0 | 0.04 | 15.55 | 0.00 | 2.093 | 10.13 | 0.10 | 5.3 | 94.7 | 0.0 | -1.04 | 1.63 | 0.66 | 0.64 | — | 37164 | 4704 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U2B | 26311 | 2023-07-04 | 2022-02-23 | 4.1 | 4.26 | — | 4.2 | 0.009 | 0.96 | 0.0 | 0.05 | 14.98 | 0.00 | 1.936 | 7.07 | 0.15 | 0.1 | 99.9 | 0.0 | 2.20 | 0.72 | 0.71 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 15.43 | 0.00 | 2.153 | 10.28 | 0.00 | 1.8 | 98.2 | 0.0 | 0.53 | 1.44 | 0.78 | 0.80 | — | 7316 | 780 | 5 | 53 | 2 | 0 | 0 | logfile |
✔ | 6G51 | 4350 | 2023-07-20 | 2018-03-28 | 4.1 | 4.42 | — | 4.0 | 0.007 | 1.44 | 22.0 | 0.10 | 21.21 | 0.00 | 0.264 | 3.79 | 0.00 | 7.0 | 92.3 | 0.8 | -2.90 | 0.71 | 0.63 | — | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 22.63 | 0.00 | 1.977 | 12.39 | 0.00 | 13.4 | 86.5 | 0.1 | -2.16 | 1.66 | 0.81 | 0.69 | — | 50662 | 6237 | 38 | 1659 | 0 | 0 | 0 | logfile |
✔ | 7UZZ | 26923 | 2023-07-09 | 2022-05-09 | 4.45 | 6.04 | 4.45 | 4.4 | 0.008 | 0.98 | 0.0 | 0.06 | 12.58 | 0.00 | 1.424 | 17.03 | 0.75 | 5.0 | 95.0 | 0.0 | -0.66 | 0.84 | 0.70 | — | 4.4 | 0.003 | 0.58 | 0.0 | 0.04 | 12.99 | 0.00 | 2.131 | 14.09 | 0.05 | 3.4 | 96.6 | 0.0 | 0.63 | 2.36 | 0.91 | 0.83 | — | 19967 | 2380 | 11 | 30 | 0 | 0 | 0 | logfile |