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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KJX | 22901 | 2023-08-10 | 2020-10-26 | 3.1 | 3.33 | — | 3.3 | 0.005 | 0.69 | 0.0 | 0.04 | 14.03 | 0.01 | 2.100 | 5.38 | 0.12 | 2.3 | 97.7 | 0.0 | 0.94 | 0.71 | 0.81 | 2.85 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.46 | 0.00 | 1.957 | 8.55 | 0.12 | 2.8 | 97.2 | 0.0 | 0.72 | 0.46 | 0.76 | 0.86 | 3.21 | 8589 | 948 | 5 | 44 | 2 | 0 | 0 | logfile |
✔ | 7ZYi | 15024 | 2023-08-10 | 2022-05-24 | 2.88 | 2.74 | 2.96 | 2.8 | 0.013 | 0.75 | 0.0 | 0.09 | 15.70 | 0.00 | 2.152 | 8.60 | 0.69 | 2.8 | 97.2 | 0.0 | 1.17 | 0.49 | 0.82 | 2.41 | 2.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.53 | 0.00 | 2.106 | 6.66 | 3.16 | 2.8 | 97.2 | 0.0 | 0.77 | 1.02 | 0.50 | 0.84 | 2.47 | 6641 | 852 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 7oDE | 12826 | 2023-08-22 | 2021-04-29 | 2.84 | 2.98 | 2.78 | 2.9 | 0.003 | 0.40 | 0.0 | 0.03 | 13.13 | 0.01 | 1.949 | 3.00 | 3.32 | 2.0 | 98.0 | 0.0 | -0.12 | 0.82 | 0.80 | 3.61 | 2.9 | 0.008 | 0.68 | 0.0 | 0.04 | 14.58 | 0.01 | 1.852 | 6.52 | 2.15 | 4.7 | 95.3 | 0.0 | -0.33 | 0.53 | 0.85 | 0.84 | 3.32 | 92524 | 1761 | 16 | 1990 | 0 | 0 | 35996 | logfile |
✔ | 7A7C | 11677 | 2023-08-11 | 2020-08-27 | 3.16 | 3.66 | 3.23 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 13.51 | 0.00 | 2.199 | 6.63 | 0.00 | 4.5 | 95.5 | 0.0 | -0.97 | 0.82 | 0.87 | 3.57 | 3.5 | 0.003 | 0.53 | 0.0 | 0.04 | 14.65 | 0.00 | 2.119 | 6.63 | 0.11 | 4.2 | 95.8 | 0.0 | -0.08 | 0.24 | 0.82 | 0.88 | 3.29 | 9387 | 1226 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KJW | 22900 | 2023-08-10 | 2020-10-26 | 2.9 | 3.11 | — | 3.1 | 0.006 | 0.56 | 0.0 | 0.04 | 13.76 | 0.00 | 2.198 | 4.70 | 0.87 | 2.6 | 97.3 | 0.1 | 0.64 | 0.76 | 0.83 | 4.14 | 3.1 | 0.003 | 0.54 | 0.0 | 0.04 | 15.79 | 0.00 | 2.276 | 7.83 | 1.62 | 2.3 | 97.7 | 0.0 | 0.44 | 0.98 | 0.76 | 0.86 | 4.14 | 8561 | 949 | 5 | 44 | 2 | 0 | 0 | logfile |
✔ | 7QD5 | 13908 | 2023-08-15 | 2021-11-26 | 3.1 | 3.21 | 3.05 | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 19.63 | 0.01 | 2.266 | 2.08 | 0.13 | 2.4 | 97.6 | 0.0 | -0.83 | 0.72 | 0.71 | 2.46 | 3.2 | 0.002 | 0.51 | 0.0 | 0.03 | 20.94 | 0.00 | 2.273 | 6.06 | 0.19 | 1.8 | 98.2 | 0.0 | 2.56 | 0.36 | 0.75 | 0.76 | 1.68 | 18380 | 1816 | 6 | 180 | 0 | 0 | 0 | logfile |
✔ | 6V3K | 21038 | 2023-08-12 | 2019-11-25 | 3.4 | 3.77 | 3.45 | 3.7 | 0.006 | 0.73 | 0.0 | 0.04 | 19.45 | 0.01 | 1.659 | 9.64 | 0.19 | 4.9 | 95.1 | 0.0 | -2.30 | 0.76 | 0.88 | 3.33 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 20.28 | 0.00 | 1.963 | 7.74 | 0.00 | 3.2 | 96.8 | 0.0 | 0.52 | 0.89 | 0.67 | 0.88 | 2.66 | 11314 | 1226 | 16 | 72 | 10 | 0 | 0 | logfile |
✔ | 8C92 | 16499 | 2023-08-09 | 2023-01-21 | 3.79 | 4.24 | 4.02 | 3.8 | 0.002 | 0.38 | 0.0 | 0.03 | 13.24 | 0.00 | 1.872 | 5.69 | 0.00 | 4.5 | 95.4 | 0.1 | 0.46 | 0.83 | 0.79 | 1.60 | 3.8 | 0.004 | 0.56 | 0.0 | 0.03 | 15.00 | 0.00 | 2.032 | 16.75 | 0.29 | 7.5 | 92.5 | 0.0 | -1.08 | 0.54 | 0.84 | 0.84 | 1.76 | 53489 | 1700 | 17 | 1873 | 0 | 0 | 0 | logfile |
✔ | 6XLA | 22237 | 2023-08-09 | 2020-06-28 | 3.1 | 3.41 | — | 3.3 | 0.005 | 0.65 | 0.0 | 0.04 | 19.84 | 0.00 | 2.276 | 3.37 | 0.00 | 0.2 | 99.8 | 0.0 | -2.59 | 0.78 | 0.84 | 3.37 | 3.3 | 0.003 | 0.55 | 0.0 | 0.04 | 20.59 | 0.00 | 2.115 | 4.72 | 0.61 | 2.3 | 97.7 | 0.0 | -0.34 | 1.32 | 0.79 | 0.86 | 2.94 | 5403 | 536 | 6 | 46 | 2 | 0 | 0 | logfile |
✔ | 7NWW | 12636 | 2023-08-27 | 2021-03-17 | 3.05 | 3.83 | 3.02 | 2.9 | 0.010 | 0.97 | 0.0 | 0.06 | 14.31 | 0.02 | 1.667 | 7.33 | 0.49 | 3.6 | 96.3 | 0.2 | -3.85 | 0.89 | 0.86 | 3.17 | 3.0 | 0.004 | 0.71 | 0.0 | 0.04 | 14.99 | 0.01 | 1.031 | 13.83 | 0.51 | 3.5 | 96.5 | 0.0 | -0.09 | 1.60 | 0.92 | 0.91 | 2.63 | 145149 | 5738 | 67 | 4651 | 415 | 0 | 0 | logfile |
✔ | 6UE9 | 20751 | 2023-08-15 | 2019-09-20 | 2.9 | 3.89 | — | 4.2 | 0.007 | 1.05 | 0.0 | 0.06 | 13.69 | 0.01 | 2.241 | 3.10 | 0.32 | 11.2 | 88.8 | 0.0 | -3.87 | 0.59 | 0.37 | 0.26 | 3.6 | 0.004 | 1.00 | 0.0 | 0.05 | 15.77 | 0.01 | 2.138 | 12.28 | 4.31 | 7.3 | 92.7 | 0.0 | -1.79 | 1.79 | 0.78 | 0.81 | 1.76 | 18227 | 2475 | 17 | 0 | 12 | 0 | 0 | logfile |
✔ | 8DTF | 27696 | 2023-08-12 | 2022-07-25 | 3.7 | 3.84 | 3.71 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 11.94 | 0.01 | 2.250 | 8.95 | 0.00 | 4.4 | 95.6 | 0.0 | 0.35 | 0.83 | 0.79 | 2.41 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.29 | 0.00 | 2.217 | 8.95 | 0.31 | 2.1 | 97.9 | 0.0 | 2.66 | 1.37 | 0.85 | 0.85 | 1.68 | 12414 | 1606 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o2P | 0611 | 2023-08-11 | 2019-02-24 | 3.3 | 3.80 | — | 3.8 | 0.014 | 1.83 | 0.0 | 0.64 | 14.48 | 0.00 | 1.908 | 0.66 | 1.16 | 4.5 | 95.5 | 0.0 | -3.17 | 0.51 | 0.72 | 2.72 | 3.8 | 0.003 | 0.95 | 0.0 | 0.09 | 16.50 | 0.00 | 1.909 | 6.70 | 0.39 | 2.6 | 97.4 | 0.0 | 1.36 | 1.41 | 0.61 | 0.85 | 1.87 | 9767 | 1179 | 3 | 0 | 29 | 0 | 0 | logfile |
✔ | 6KMF | 0724 | 2023-08-10 | 2019-07-31 | 3.6 | 3.51 | — | 4.0 | 0.006 | 0.90 | 0.0 | 0.06 | 14.66 | 0.01 | 2.298 | 5.31 | 0.62 | 13.4 | 86.6 | 0.0 | -4.41 | 0.52 | 0.80 | 2.69 | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.46 | 0.00 | 2.172 | 10.43 | 0.12 | 10.3 | 89.7 | 0.0 | -3.04 | 0.49 | 0.53 | 0.80 | 2.28 | 7704 | 1011 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WBN | 21594 | 2023-08-24 | 2020-03-26 | 2.83 | 3.46 | — | 3.1 | 0.010 | 0.88 | 0.0 | 0.05 | 17.12 | 0.00 | 2.069 | 12.73 | 0.80 | 4.5 | 95.5 | 0.0 | -0.59 | 0.78 | 0.83 | 3.00 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 15.25 | 0.00 | 2.226 | 6.82 | 1.82 | 2.8 | 97.2 | 0.0 | 2.17 | 1.51 | 0.79 | 0.87 | 3.01 | 38402 | 4774 | 28 | 0 | 84 | 0 | 0 | logfile |
✔ | 7LQV | 23489 | 2023-08-21 | 2021-02-15 | 3.25 | 3.89 | 3.38 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 13.53 | 0.00 | 2.020 | 4.78 | 0.06 | 5.4 | 94.6 | 0.0 | -0.41 | 0.78 | 0.77 | 1.95 | 3.7 | 0.005 | 0.64 | 0.0 | 0.05 | 15.02 | 0.00 | 2.103 | 10.04 | 0.26 | 7.0 | 92.9 | 0.0 | -0.70 | 0.48 | 0.80 | 0.83 | 1.87 | 31274 | 3980 | 12 | 0 | 28 | 0 | 0 | logfile |
✔ | 7YWA | 34151 | 2023-08-09 | 2022-08-22 | 3.26 | 2.85 | 3.14 | 3.1 | 0.006 | 0.87 | 0.0 | 0.05 | 18.79 | 0.00 | 1.718 | 11.41 | 0.85 | 3.0 | 97.0 | 0.0 | 0.53 | 0.37 | 0.69 | 2.31 | 3.0 | 0.005 | 0.63 | 0.0 | 0.05 | 18.78 | 0.00 | 1.917 | 13.56 | 0.17 | 3.5 | 96.5 | 0.0 | 0.37 | 0.61 | 0.45 | 0.75 | 2.53 | 5808 | 744 | 6 | 6 | 4 | 0 | 0 | logfile |
✔ | 7YM8 | 33924 | 2023-08-09 | 2022-07-27 | 2.92 | 3.14 | 2.90 | 3.2 | 0.006 | 0.86 | 0.0 | 0.05 | 15.40 | 0.01 | 2.331 | 4.04 | 0.00 | 4.2 | 95.8 | 0.0 | -3.62 | 0.68 | 0.81 | 3.68 | 3.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.52 | 0.00 | 2.231 | 6.05 | 1.40 | 3.9 | 96.1 | 0.0 | 0.23 | 0.47 | 0.66 | 0.82 | 3.11 | 4287 | 556 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LiM | 23383 | 2023-08-17 | 2021-01-27 | 2.75 | 2.92 | — | 2.9 | 0.007 | 1.05 | 60.0 | 0.06 | 15.45 | 0.01 | 2.436 | 3.47 | 3.49 | 3.5 | 96.5 | 0.0 | -2.97 | 0.74 | 0.84 | 3.83 | 3.0 | 0.005 | 0.87 | 0.0 | 0.05 | 18.05 | 0.01 | 2.272 | 3.74 | 2.40 | 3.8 | 96.2 | 0.0 | -2.46 | 0.30 | 0.75 | 0.86 | 2.97 | 127440 | 15480 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 6XEY | 22156 | 2023-08-20 | 2020-06-14 | 3.25 | 3.61 | 3.10 | 2.1 | 0.005 | 0.85 | 1.0 | 0.06 | 12.74 | 0.01 | 2.265 | 3.63 | 0.26 | 5.1 | 94.8 | 0.1 | -1.87 | 0.88 | 0.83 | 3.34 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 13.87 | 0.00 | 2.134 | 6.74 | 0.29 | 5.0 | 95.0 | 0.0 | -0.55 | 0.33 | 0.89 | 0.85 | 2.49 | 28482 | 3788 | 24 | 0 | 63 | 0 | 0 | logfile |