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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5Lii | 4053 | 2023-08-08 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YL3 | 33902 | 2023-08-09 | 2022-07-25 | 3.2 | 3.58 | 3.19 | 3.5 | 0.011 | 2.22 | 0.0 | 0.06 | 10.67 | 0.00 | 1.654 | 22.50 | 0.00 | 3.3 | 96.7 | 0.0 | -4.03 | 0.45 | 0.76 | 4.44 | 3.5 | 0.007 | 0.82 | 0.0 | 0.05 | 13.30 | 0.00 | 2.246 | 11.74 | 0.31 | 12.8 | 87.2 | 0.0 | -4.85 | 1.42 | 0.43 | 0.77 | 4.87 | 2958 | 396 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8J26 | 35945 | 2023-08-09 | 2023-04-14 | 3.4 | 3.96 | 3.29 | 3.7 | 0.028 | 1.81 | 0.0 | 0.05 | 28.11 | 0.00 | 2.066 | 7.74 | 0.56 | 7.8 | 92.2 | 0.0 | -1.01 | 0.76 | 0.68 | 2.77 | 3.7 | 0.003 | 1.21 | 0.0 | 0.04 | 27.97 | 0.00 | 2.200 | 10.94 | 0.28 | 6.4 | 93.6 | 0.0 | -1.01 | 0.94 | 0.82 | 0.81 | 2.41 | 5406 | 427 | 6 | 90 | 1 | 0 | 0 | logfile |
✔ | 7Q66 | 13853 | 2023-08-09 | 2021-11-05 | 2.79 | 2.87 | 2.63 | 2.9 | 0.021 | 1.42 | 0.0 | 0.11 | 12.58 | 0.01 | 2.277 | 13.59 | 6.52 | 0.0 | 100.0 | 0.0 | -4.18 | 0.63 | 0.84 | 3.82 | 2.9 | 0.004 | 0.75 | 0.0 | 0.04 | 16.09 | 0.00 | 2.208 | 12.61 | 6.92 | 0.8 | 99.2 | 0.0 | -4.23 | 0.65 | 0.62 | 0.88 | 4.75 | 4807 | 682 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q65 | 13852 | 2023-08-09 | 2021-11-05 | 3.32 | 2.96 | 3.26 | 3.3 | 0.016 | 1.56 | 0.0 | 0.10 | 10.10 | 0.01 | 2.159 | 3.45 | 8.33 | 10.5 | 89.5 | 0.0 | -5.74 | 0.64 | 0.85 | 4.16 | 3.3 | 0.003 | 0.65 | 0.0 | 0.03 | 13.00 | 0.00 | 2.080 | 12.96 | 1.06 | 7.7 | 92.3 | 0.0 | -5.20 | 0.70 | 0.57 | 0.83 | 4.09 | 6204 | 880 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PEo | 20328 | 2023-08-09 | 2019-06-20 | 3.3 | 3.52 | — | 3.6 | 0.003 | 0.54 | 0.0 | 0.05 | 13.06 | 0.01 | 2.492 | 10.62 | 0.00 | 9.7 | 90.3 | 0.0 | -1.64 | 0.41 | 0.82 | 3.20 | 3.6 | 0.006 | 0.64 | 0.0 | 0.06 | 15.71 | 0.00 | 2.448 | 8.63 | 0.89 | 9.7 | 90.3 | 0.0 | -2.55 | 1.63 | 0.42 | 0.83 | 5.44 | 2205 | 320 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZRF | 11380 | 2023-08-09 | 2020-07-13 | 3.6 | 3.66 | 1.96 | 3.6 | 0.014 | 1.28 | 0.0 | 0.05 | 13.30 | 0.00 | 1.993 | 42.14 | 0.00 | 4.9 | 95.1 | 0.0 | -6.22 | 0.67 | 0.79 | 1.84 | 3.7 | 0.005 | 0.80 | 0.0 | 0.05 | 14.67 | 0.00 | 2.223 | 24.41 | 0.00 | 12.1 | 87.9 | 0.0 | -5.90 | 0.52 | 0.69 | 0.82 | 3.16 | 2220 | 300 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YVH | 34127 | 2023-08-09 | 2022-08-19 | 3.6 | 3.83 | 3.91 | 3.7 | 0.006 | 1.11 | 2.0 | 0.06 | 13.30 | 0.01 | 1.941 | 15.71 | 1.58 | 8.7 | 90.8 | 0.5 | -4.17 | 0.68 | 0.74 | 2.43 | 3.7 | 0.003 | 0.82 | 0.0 | 0.04 | 15.81 | 0.00 | 2.218 | 11.41 | 1.26 | 4.8 | 95.2 | 0.0 | -1.09 | 1.45 | 0.70 | 0.77 | 2.02 | 3124 | 420 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ADE | 15361 | 2023-08-09 | 2022-07-08 | 2.78 | 2.65 | 2.55 | 2.7 | 0.012 | 1.58 | 0.0 | 0.11 | 9.64 | 0.00 | 2.213 | 3.08 | 0.00 | 3.4 | 96.6 | 0.0 | -4.12 | 0.74 | 0.76 | 3.27 | 3.0 | 0.005 | 0.75 | 0.0 | 0.05 | 15.07 | 0.00 | 2.172 | 13.13 | 1.83 | 2.9 | 97.1 | 0.0 | -2.61 | 0.73 | 0.77 | 0.83 | 4.24 | 5026 | 644 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M65 | 23689 | 2023-08-09 | 2021-03-25 | 4.1 | 4.11 | — | 4.3 | 0.009 | 1.40 | 0.0 | 0.10 | 12.05 | 0.00 | 2.392 | 33.63 | 0.00 | 17.6 | 82.4 | 0.0 | -6.09 | 0.52 | 0.73 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 11.75 | 0.00 | 2.164 | 15.54 | 0.00 | 9.8 | 90.2 | 0.0 | -5.71 | 4.56 | 0.51 | 0.70 | — | 2025 | 275 | 10 | 0 | 5 | 0 | 0 | logfile |
✘ | 7YVM | 34132 | 2023-08-09 | 2022-08-19 | 3.5 | 3.56 | 3.31 | 3.6 | 0.009 | 1.38 | 6.0 | 0.09 | 13.48 | 0.01 | 2.166 | 28.59 | 1.57 | 8.9 | 90.6 | 0.5 | -4.19 | 0.55 | 0.72 | 1.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3126 | 420 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GX5 | 0077 | 2023-08-09 | 2018-06-26 | 3.2 | 2.51 | 2.94 | 3.2 | 0.017 | 1.20 | 0.0 | 0.11 | 16.09 | 0.01 | 2.596 | 5.96 | 4.94 | 4.3 | 95.7 | 0.0 | -3.50 | 0.85 | 0.88 | 5.60 | 3.2 | 0.004 | 0.76 | 0.0 | 0.05 | 17.31 | 0.00 | 2.207 | 9.16 | 1.65 | 5.8 | 94.2 | 0.0 | -2.81 | 0.66 | 0.82 | 0.85 | 4.84 | 2133 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VH7 | 21200 | 2023-08-09 | 2020-01-09 | 3.8 | 3.84 | — | 4.1 | 0.007 | 1.03 | 0.0 | 0.05 | 15.14 | 0.01 | 2.318 | 28.35 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.54 | 0.62 | 2.62 | 4.0 | 0.003 | 0.75 | 0.0 | 0.05 | 16.44 | 0.00 | 2.317 | 9.92 | 0.71 | 5.9 | 94.1 | 0.0 | -4.23 | 3.68 | 0.58 | 0.66 | 1.63 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M64 | 23688 | 2023-08-09 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.87 | 0.0 | 0.04 | 11.23 | 0.00 | 2.241 | 5.93 | 0.00 | 5.2 | 94.8 | 0.0 | -3.94 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 8CYV | 27085 | 2023-08-09 | 2022-05-24 | 3.5 | 3.17 | 3.47 | 3.7 | 0.003 | 0.61 | 0.0 | 0.05 | 10.01 | 0.00 | 2.423 | 5.36 | 0.00 | 5.9 | 94.1 | 0.0 | -4.11 | 0.58 | 0.72 | 2.74 | 3.4 | 0.004 | 0.75 | 0.0 | 0.05 | 16.08 | 0.00 | 2.184 | 9.50 | 2.17 | 7.0 | 92.4 | 0.6 | -4.20 | 1.35 | 0.59 | 0.75 | 2.25 | 5964 | 864 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N9Y | 0383 | 2023-08-09 | 2018-12-04 | 4.0 | 3.80 | — | 3.7 | 0.008 | 1.10 | 0.0 | 0.05 | 10.30 | 0.01 | 2.229 | 4.80 | 0.42 | 9.1 | 90.9 | 0.0 | -4.98 | 0.38 | 0.73 | — | 3.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.57 | 0.00 | 2.156 | 13.06 | 0.00 | 7.8 | 92.2 | 0.0 | -0.84 | 1.77 | 0.40 | 0.79 | — | 4527 | 552 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7YVL | 34131 | 2023-08-09 | 2022-08-19 | 3.3 | 3.44 | 3.21 | 3.4 | 0.011 | 1.16 | 5.0 | 0.07 | 12.98 | 0.01 | 2.155 | 18.66 | 1.42 | 9.0 | 90.6 | 0.5 | -4.93 | 0.57 | 0.77 | 1.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3224 | 419 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8J1Q | 35930 | 2023-08-09 | 2023-04-13 | 3.3 | 4.10 | 3.20 | 3.9 | 0.030 | 1.93 | 0.0 | 0.05 | 28.55 | 0.00 | 2.043 | 8.92 | 0.28 | 7.1 | 92.9 | 0.0 | -1.02 | 0.73 | 0.64 | 2.45 | 3.9 | 0.003 | 1.32 | 0.0 | 0.04 | 28.74 | 0.00 | 2.192 | 13.94 | 0.84 | 5.9 | 94.1 | 0.0 | -0.92 | 0.51 | 0.78 | 0.78 | 1.91 | 5447 | 427 | 5 | 90 | 1 | 0 | 0 | logfile |
✔ | 8ADU | 15370 | 2023-08-09 | 2022-07-11 | 3.24 | 2.85 | 2.78 | 3.3 | 0.007 | 0.82 | 0.0 | 0.07 | 15.52 | 0.00 | 2.296 | 20.22 | 0.00 | 11.3 | 88.7 | 0.0 | -4.91 | 0.52 | 0.82 | 3.23 | 3.3 | 0.006 | 0.77 | 0.0 | 0.05 | 17.58 | 0.00 | 2.306 | 16.01 | 2.61 | 12.8 | 87.2 | 0.0 | -4.37 | 2.39 | 0.48 | 0.82 | 3.07 | 3460 | 495 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F29 | 31428 | 2023-08-09 | 2021-06-10 | 3.1 | 3.08 | — | 3.2 | 0.014 | 1.07 | 0.0 | 0.06 | 15.69 | 0.00 | 2.305 | 11.88 | 0.00 | 14.3 | 85.7 | 0.0 | -3.96 | 0.42 | 0.83 | 5.02 | 3.2 | 0.005 | 0.71 | 0.0 | 0.05 | 17.49 | 0.00 | 2.340 | 5.10 | 0.00 | 12.9 | 87.1 | 0.0 | -2.13 | 1.15 | 0.42 | 0.83 | 4.62 | 1794 | 222 | 18 | 0 | 18 | 0 | 0 | logfile |