The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5M6S | 3451 | 2024-01-17 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.3 | 0.003 | 0.65 | 0.0 | 0.03 | 17.89 | 0.00 | 1.955 | 10.05 | 0.00 | 6.2 | 93.8 | 0.0 | 1.72 | 2.25 | 0.03 | 0.07 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 5MSH | 3565 | 2024-01-17 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.8 | 0.003 | 0.78 | 0.0 | 0.05 | 13.12 | 0.01 | 2.193 | 15.96 | 0.00 | 7.5 | 92.5 | 0.0 | -1.32 | 1.97 | 0.04 | 0.15 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2024-01-17 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 29.15 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 28.11 | 0.01 | 2.074 | 26.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.07 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7UR5 | 26705 | 2024-01-17 | 2022-04-21 | 2.6 | 2.89 | 2.82 | 2.9 | 0.008 | 1.48 | 0.0 | 0.11 | 28.78 | 0.01 | 2.204 | 2.44 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.58 | — | 2.9 | 0.006 | 0.89 | 0.0 | 0.05 | 26.17 | 0.01 | 2.007 | 15.80 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.85 | 0.08 | 0.66 | — | 5709 | 0 | 3 | 270 | 0 | 0 | 0 | logfile |
✔ | 7RTM | 24683 | 2024-01-18 | 2021-08-13 | 3.4 | 3.54 | 3.61 | 20.0 | 0.031 | 3.05 | 44.0 | 0.18 | 16.56 | 0.03 | 1.051 | 1.40 | 2.80 | 6.8 | 93.0 | 0.3 | -1.12 | 0.10 | 0.04 | 0.21 | 3.5 | 0.003 | 0.83 | 0.0 | 0.04 | 15.98 | 0.00 | 2.134 | 10.79 | 2.20 | 5.4 | 94.6 | 0.1 | 0.27 | 4.69 | 0.66 | 0.78 | 1.34 | 9161 | 1142 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6KFK | 9974 | 2024-01-19 | 2019-07-08 | 4.1 | 4.28 | — | 15.0 | 0.015 | 1.99 | 0.0 | 0.08 | 10.94 | 0.01 | 1.444 | 20.13 | 0.00 | 8.2 | 89.5 | 2.2 | -1.03 | 0.14 | 0.06 | — | 4.2 | 0.004 | 0.91 | 0.0 | 0.05 | 12.96 | 0.00 | 2.067 | 21.77 | 0.00 | 7.8 | 91.3 | 0.9 | -1.51 | 2.73 | 0.24 | 0.31 | — | 65076 | 8844 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2024-01-17 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.003 | 0.85 | 0.0 | 0.05 | 12.37 | 0.01 | 2.369 | 17.88 | 0.00 | 7.9 | 92.1 | 0.0 | -0.80 | 1.84 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2024-01-17 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 27.77 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.15 | 0.0 | 0.05 | 27.25 | 0.01 | 1.995 | 31.69 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.69 | 0.15 | 0.53 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7XoV | 33360 | 2024-01-18 | 2022-05-01 | 3.0 | 3.23 | 3.00 | 6.0 | 0.019 | 1.84 | 0.0 | 0.09 | 10.85 | 0.02 | 2.322 | 6.84 | 0.90 | 3.0 | 96.9 | 0.1 | 0.50 | 0.14 | 0.02 | 0.62 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 15.48 | 0.00 | 2.051 | 10.57 | 1.79 | 3.8 | 96.1 | 0.1 | 0.33 | 1.71 | 0.48 | 0.61 | 1.14 | 8218 | 1036 | 5 | 0 | 1 | 1 | 0 | logfile |
✔ | 8TEK | 41189 | 2024-01-20 | 2023-07-06 | 3.6 | 2.85 | 3.88 | 3.4 | 0.015 | 0.65 | 0.0 | 0.04 | 15.86 | 0.00 | 2.065 | 14.54 | 0.00 | 3.9 | 96.0 | 0.1 | -1.18 | 0.16 | 0.51 | 0.46 | 2.7 | 0.015 | 0.79 | 0.0 | 0.04 | 19.31 | 0.00 | 2.078 | 20.47 | 3.65 | 4.4 | 95.5 | 0.1 | -0.11 | 2.30 | 0.19 | 0.67 | 0.47 | 15250 | 1817 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CK0 | 16688 | 2024-01-17 | 2023-02-14 | 3.8 | 3.83 | 3.70 | 3.8 | 0.005 | 0.80 | 0.0 | 0.05 | 16.63 | 0.01 | 2.259 | 15.81 | 0.00 | 5.3 | 94.7 | 0.0 | 0.79 | 0.17 | 0.78 | 1.47 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 17.84 | 0.00 | 2.287 | 11.79 | 3.38 | 3.8 | 96.2 | 0.0 | 2.14 | 0.70 | 0.18 | 0.78 | 1.72 | 3762 | 478 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D43 | 27173 | 2024-01-18 | 2022-06-01 | 2.88 | 3.12 | 2.94 | 5.9 | 0.004 | 0.84 | 1.0 | 0.06 | 18.87 | 0.01 | 1.371 | 8.43 | 5.48 | 6.5 | 93.5 | 0.0 | -1.48 | 0.17 | -0.02 | 0.37 | 3.1 | 0.005 | 0.95 | 0.0 | 0.05 | 18.29 | 0.01 | 2.053 | 24.56 | 2.38 | 8.9 | 91.0 | 0.1 | -1.79 | 2.25 | 0.42 | 0.36 | 1.11 | 7763 | 962 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 8JoU | 36462 | 2024-01-19 | 2023-06-08 | 4.1 | 6.13 | 3.95 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 12.09 | 0.01 | 0.759 | 16.82 | 0.49 | 7.7 | 90.4 | 1.9 | -1.54 | 0.17 | 0.37 | — | 3.1 | 0.003 | 0.69 | 0.0 | 0.04 | 11.93 | 0.00 | 2.055 | 23.73 | 0.08 | 8.5 | 89.8 | 1.7 | -1.53 | 1.41 | 0.23 | 0.86 | — | 62425 | 8135 | 70 | 0 | 590 | 0 | 0 | logfile |
✔ | 7ASK | 11895 | 2024-01-19 | 2020-10-27 | 4.3 | 4.39 | — | 4.3 | 0.028 | 2.99 | 47.0 | 0.22 | 18.83 | 0.02 | 0.766 | 14.21 | 2.58 | 16.8 | 73.5 | 9.7 | -6.06 | 0.17 | 0.51 | — | 4.3 | 0.015 | 1.13 | 2.0 | 0.05 | 15.40 | 0.01 | 2.076 | 16.90 | 0.00 | 18.4 | 80.1 | 1.5 | -3.44 | 1.30 | 0.18 | 0.61 | — | 12285 | 1523 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2024-01-17 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 15.38 | 0.00 | 2.197 | 14.66 | 0.00 | 10.0 | 88.8 | 1.2 | -2.49 | 3.10 | 0.25 | 0.69 | 0.37 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 5A8L | 3099 | 2024-01-19 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 20.10 | 0.00 | 1.435 | 8.96 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.83 | 0.0 | 0.04 | 22.46 | 0.01 | 2.089 | 19.78 | 3.98 | 11.9 | 87.1 | 1.0 | -2.33 | 1.54 | 0.23 | 0.63 | 0.73 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 8UoP | 42435 | 2024-01-20 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 17.24 | 0.00 | 1.974 | 15.70 | 4.69 | 13.0 | 86.6 | 0.3 | -3.07 | 0.94 | 0.24 | 0.24 | 0.12 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |
✔ | 8iEN | 35387 | 2024-01-18 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✔ | 5TC1 | 8397 | 2024-01-20 | 2016-09-13 | 3.6 | 3.60 | — | 3.6 | 0.006 | 0.87 | 0.0 | 0.08 | 21.29 | 0.01 | 1.126 | 33.79 | 0.27 | 3.3 | 96.7 | 0.0 | -3.80 | 0.19 | 0.77 | 4.30 | 3.6 | 0.004 | 0.76 | 0.0 | 0.04 | 20.25 | 0.00 | 2.207 | 7.12 | 3.48 | 3.8 | 96.2 | 0.0 | -0.43 | 0.66 | 0.21 | 0.84 | 2.85 | 15393 | 1352 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 8B6Z | 15893 | 2024-01-17 | 2022-09-27 | 2.9 | 3.26 | 3.37 | 2.8 | 0.002 | 0.51 | 0.0 | 0.04 | 11.87 | 0.00 | 2.286 | 0.59 | 0.27 | 1.4 | 98.6 | 0.0 | -0.69 | 0.20 | 0.56 | 1.62 | 2.8 | 0.003 | 0.68 | 0.0 | 0.04 | 15.22 | 0.01 | 2.195 | 7.54 | 0.80 | 4.3 | 95.7 | 0.0 | -0.29 | 1.07 | 0.23 | 0.76 | 1.75 | 3581 | 442 | 2 | 8 | 0 | 0 | 0 | logfile |