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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QK5 | 14038 | 2024-01-19 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.003 | 0.57 | 0.0 | 0.05 | 18.01 | 0.00 | 2.271 | 3.34 | 2.22 | 2.9 | 97.1 | 0.0 | -1.72 | 1.63 | 0.36 | 0.82 | 7.20 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 8F0K | 28759 | 2024-01-19 | 2022-11-03 | 1.9 | 1.70 | 1.92 | 1.9 | 0.010 | 0.59 | 0.0 | 0.04 | 14.28 | 0.01 | 2.252 | 4.34 | 0.91 | 1.2 | 98.8 | 0.0 | -1.70 | 0.50 | 0.67 | 4.75 | 1.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.28 | 0.00 | 2.209 | 6.00 | 1.82 | 1.9 | 98.1 | 0.0 | 1.45 | 0.59 | 0.60 | 0.81 | 5.04 | 10553 | 1272 | 12 | 0 | 18 | 39 | 0 | logfile |
✔ | 7T2G | 25612 | 2024-01-17 | 2021-12-04 | 2.5 | 1.71 | — | 1.4 | 0.007 | 0.88 | 0.0 | 0.05 | 12.03 | 0.01 | 2.214 | 13.39 | 1.00 | 3.5 | 96.5 | 0.0 | 0.61 | 0.80 | 0.81 | 5.15 | 1.4 | 0.003 | 0.57 | 0.0 | 0.04 | 14.59 | 0.00 | 2.145 | 11.70 | 2.00 | 2.1 | 97.9 | 0.0 | 0.68 | 0.37 | 0.80 | 0.81 | 4.59 | 6922 | 898 | 4 | 0 | 3 | 8 | 0 | logfile |
✔ | 7VZ4 | 32220 | 2024-01-19 | 2021-11-15 | 1.89 | 1.72 | — | 1.9 | 0.010 | 1.17 | 0.0 | 0.08 | 28.81 | 0.00 | 2.167 | 2.63 | 0.97 | 1.6 | 98.4 | 0.0 | 0.11 | 0.75 | 0.82 | 7.08 | 1.9 | 0.004 | 0.63 | 0.0 | 0.04 | 28.12 | 0.00 | 2.311 | 4.46 | 1.13 | 0.7 | 99.3 | 0.0 | 2.95 | 0.80 | 0.77 | 0.86 | 7.59 | 11843 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7N8o | 24239 | 2024-01-17 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.025 | 2.40 | 0.0 | 0.11 | 22.23 | 0.01 | 1.522 | 14.77 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.02 | 0.01 | 2.008 | 11.90 | 1.84 | 2.9 | 97.1 | 0.0 | 0.97 | 0.35 | 0.75 | 0.77 | 5.38 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 8P6Y | 17511 | 2024-01-17 | 2023-05-30 | 1.9 | 1.73 | 1.95 | 1.9 | 0.005 | 0.60 | 0.0 | 0.04 | 17.03 | 0.00 | 2.148 | 3.62 | 0.36 | 1.0 | 98.9 | 0.2 | 1.99 | 0.68 | 0.84 | 6.33 | 1.9 | 0.003 | 0.60 | 0.0 | 0.04 | 17.08 | 0.00 | 2.135 | 4.60 | 1.08 | 1.1 | 98.7 | 0.2 | 1.73 | 0.21 | 0.68 | 0.85 | 6.38 | 5266 | 630 | 7 | 0 | 3 | 158 | 0 | logfile |
✔ | 7QKW | 14055 | 2024-01-17 | 2021-12-19 | 2.32 | 1.74 | 2.60 | 2.3 | 0.010 | 1.93 | 1.0 | 0.10 | 13.53 | 0.01 | 2.534 | 0.00 | 0.00 | 5.4 | 94.6 | 0.0 | -2.79 | 0.41 | 0.81 | 7.02 | 2.3 | 0.002 | 0.51 | 0.0 | 0.05 | 16.50 | 0.00 | 2.444 | 1.91 | 1.45 | 4.8 | 95.2 | 0.0 | -2.82 | 1.30 | 0.42 | 0.85 | 6.07 | 4707 | 306 | 6 | 0 | 0 | 0 | 2439 | logfile |
✔ | 8Q98 | 18271 | 2024-01-18 | 2023-08-20 | 1.75 | 1.75 | 1.77 | 1.8 | 0.011 | 1.66 | 0.0 | 0.07 | 9.83 | 0.01 | 2.543 | 0.00 | 0.00 | 0.5 | 99.5 | 0.0 | -0.80 | 0.22 | 0.65 | 8.64 | 1.8 | 0.002 | 0.49 | 0.0 | 0.05 | 13.51 | 0.00 | 2.352 | 2.28 | 0.51 | 0.2 | 99.8 | 0.0 | -0.53 | 1.16 | 0.43 | 0.90 | 8.01 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7EFC | 31083 | 2024-01-17 | 2021-03-21 | 1.7 | 1.76 | 1.76 | 1.9 | 0.032 | 3.16 | 16.0 | 0.09 | 14.88 | 0.02 | 0.001 | 2.15 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.75 | 0.84 | 6.42 | 1.9 | 0.006 | 0.87 | 0.0 | 0.05 | 14.55 | 0.01 | 1.768 | 10.33 | 0.54 | 3.8 | 96.2 | 0.0 | 0.14 | 0.88 | 0.80 | 0.85 | 6.64 | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 8ooS | 17027 | 2024-01-19 | 2023-04-05 | 3.29 | 1.76 | 3.20 | 3.1 | 0.007 | 1.29 | 0.0 | 0.05 | 24.79 | 0.01 | 1.879 | 4.57 | 0.00 | 3.2 | 96.8 | 0.0 | -2.38 | 0.71 | 0.73 | 2.66 | 3.1 | 0.004 | 0.79 | 0.0 | 0.04 | 25.62 | 0.00 | 1.892 | 10.10 | 1.91 | 3.2 | 96.8 | 0.0 | 0.82 | 1.60 | 0.74 | 0.74 | 1.82 | 12307 | 966 | 10 | 217 | 3 | 0 | 0 | logfile |
✔ | 8P6V | 17508 | 2024-01-17 | 2023-05-30 | 1.9 | 1.76 | 1.97 | 1.9 | 0.005 | 0.62 | 0.0 | 0.04 | 16.30 | 0.00 | 2.221 | 5.67 | 1.26 | 1.8 | 98.1 | 0.2 | 1.53 | 0.64 | 0.77 | 5.52 | 1.9 | 0.004 | 0.64 | 0.0 | 0.04 | 16.85 | 0.00 | 2.111 | 6.94 | 2.17 | 1.6 | 98.2 | 0.2 | 1.31 | 0.77 | 0.64 | 0.78 | 5.57 | 5243 | 630 | 7 | 0 | 2 | 138 | 0 | logfile |
✔ | 7UUR | 26801 | 2024-01-20 | 2022-04-28 | 1.67 | 1.76 | 1.67 | 1.8 | 0.061 | 2.45 | 3.0 | 0.98 | 14.57 | 0.01 | 1.674 | 7.19 | 0.44 | 2.5 | 97.2 | 0.2 | -0.89 | 0.76 | 0.87 | 7.87 | 1.8 | 0.006 | 2.39 | 0.0 | 0.09 | 14.61 | 0.00 | 1.579 | 11.53 | 0.36 | 2.1 | 97.9 | 0.0 | 0.34 | 0.28 | 0.76 | 0.87 | 7.62 | 13683 | 1668 | 12 | 0 | 18 | 603 | 0 | logfile |
✔ | 8F0J | 28758 | 2024-01-18 | 2022-11-03 | 2.0 | 1.77 | 1.94 | 1.9 | 0.011 | 0.61 | 1.0 | 0.05 | 15.42 | 0.00 | 2.246 | 4.03 | 0.40 | 1.1 | 98.9 | 0.0 | -1.49 | 0.53 | 0.75 | 5.18 | 1.9 | 0.003 | 0.59 | 0.0 | 0.04 | 16.99 | 0.00 | 2.206 | 6.10 | 1.42 | 2.4 | 97.6 | 0.0 | 1.53 | 0.83 | 0.54 | 0.77 | 5.64 | 9678 | 1157 | 11 | 0 | 18 | 25 | 0 | logfile |
✔ | 7RCV | 24407 | 2024-01-17 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.38 | 0.0 | 0.11 | 22.23 | 0.01 | 1.915 | 13.94 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.005 | 0.86 | 0.0 | 0.05 | 18.39 | 0.01 | 2.031 | 12.38 | 1.91 | 2.9 | 97.1 | 0.0 | 0.64 | 0.35 | 0.81 | 0.84 | 5.28 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7M4U | 23666 | 2024-01-17 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 21.77 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.006 | 0.81 | 0.0 | 0.04 | 22.11 | 0.01 | 1.685 | 5.90 | 3.48 | 3.7 | 96.2 | 0.2 | 0.43 | 1.73 | 0.82 | 0.81 | 3.49 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 8F2B | 28812 | 2024-01-19 | 2022-11-07 | 2.0 | 1.79 | 2.02 | 1.9 | 0.011 | 0.55 | 0.0 | 0.04 | 14.23 | 0.00 | 2.278 | 5.13 | 1.32 | 1.0 | 99.0 | 0.0 | -2.02 | 0.54 | 0.74 | 4.60 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 16.06 | 0.00 | 2.175 | 6.54 | 2.08 | 2.3 | 97.7 | 0.0 | 1.17 | 0.95 | 0.55 | 0.75 | 5.04 | 10360 | 1273 | 12 | 0 | 16 | 31 | 0 | logfile |
✔ | 7PQU | 13605 | 2024-01-19 | 2021-09-20 | 3.03 | 1.80 | — | 3.4 | 0.008 | 0.90 | 0.0 | 0.05 | 17.24 | 0.01 | 0.051 | 14.73 | 5.14 | 7.9 | 92.0 | 0.1 | -3.95 | 0.77 | 0.80 | 2.84 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 16.70 | 0.01 | 2.236 | 9.43 | 3.37 | 5.7 | 94.3 | 0.0 | -0.55 | 0.99 | 0.76 | 0.79 | 2.34 | 10798 | 1312 | 12 | 0 | 8 | 14 | 0 | logfile |
✔ | 8ooA | 17008 | 2024-01-18 | 2023-04-04 | 3.18 | 1.83 | 3.09 | 2.8 | 0.008 | 1.08 | 0.0 | 0.06 | 27.96 | 0.01 | 2.299 | 5.05 | 0.00 | 1.5 | 98.5 | 0.0 | -2.10 | 0.75 | 0.76 | 3.22 | 2.8 | 0.004 | 0.59 | 0.0 | 0.04 | 28.25 | 0.00 | 2.142 | 8.18 | 2.71 | 1.5 | 98.5 | 0.0 | 2.17 | 1.02 | 0.77 | 0.76 | 2.43 | 8405 | 529 | 8 | 204 | 0 | 0 | 0 | logfile |
✔ | 8oRM | 17129 | 2024-01-17 | 2023-04-14 | 1.9 | 1.83 | 1.88 | 1.9 | 0.004 | 0.58 | 0.0 | 0.04 | 16.75 | 0.00 | 2.236 | 3.99 | 0.90 | 1.6 | 98.2 | 0.2 | 1.88 | 0.70 | 0.81 | 5.96 | 1.9 | 0.006 | 0.72 | 0.0 | 0.05 | 16.75 | 0.01 | 2.174 | 6.63 | 1.08 | 1.3 | 98.5 | 0.2 | 1.15 | 0.19 | 0.70 | 0.83 | 5.87 | 5341 | 632 | 7 | 0 | 2 | 210 | 0 | logfile |
✔ | 6ZGL | 11210 | 2024-01-20 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.72 | 0.00 | 2.115 | 4.79 | 1.24 | 0.9 | 99.1 | 0.0 | 3.47 | 0.72 | 0.75 | 0.83 | 7.06 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |