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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ELD | 31181 | 2024-01-19 | 2021-04-09 | 4.6 | 9.12 | — | 7.4 | 0.012 | 1.41 | 6.0 | 0.11 | 19.72 | 0.00 | 2.446 | 8.52 | 10.68 | 2.9 | 96.2 | 0.9 | 3.37 | 0.79 | 0.50 | — | 7.1 | 0.003 | 0.74 | 0.0 | 0.04 | 18.50 | 0.00 | 2.067 | 29.76 | 0.00 | 6.0 | 93.5 | 0.5 | -0.37 | 1.47 | 0.89 | 0.78 | — | 11282 | 1137 | 2 | 109 | 0 | 0 | 0 | logfile |
✔ | 8KG9 | 37215 | 2024-01-19 | 2023-08-17 | 4.52 | 8.93 | 5.25 | 4.5 | 0.004 | 0.77 | 0.0 | 0.05 | 14.79 | 0.00 | 1.015 | 36.87 | 0.74 | 6.0 | 93.8 | 0.3 | -0.28 | 0.88 | 0.79 | — | 4.5 | 0.004 | 0.70 | 0.0 | 0.04 | 14.84 | 0.00 | 1.828 | 36.32 | 0.00 | 6.5 | 93.3 | 0.2 | -0.53 | 0.36 | 0.88 | 0.77 | — | 63507 | 7910 | 25 | 23 | 15 | 0 | 0 | logfile |
✔ | 7ELE | 31182 | 2024-01-19 | 2021-04-09 | 4.9 | 8.62 | — | 7.5 | 0.007 | 1.16 | 0.0 | 0.06 | 21.16 | 0.01 | 2.210 | 17.86 | 8.44 | 9.1 | 90.1 | 0.8 | -3.55 | 0.87 | 0.71 | — | 7.5 | 0.003 | 0.73 | 0.0 | 0.04 | 18.31 | 0.00 | 2.020 | 30.95 | 0.00 | 9.9 | 89.9 | 0.2 | -1.87 | 1.67 | 0.88 | 0.73 | — | 10733 | 1137 | 2 | 83 | 0 | 0 | 0 | logfile |
✔ | 7UY8 | 26867 | 2024-01-18 | 2022-05-06 | 4.5 | 8.56 | 4.38 | 4.2 | 0.003 | 0.63 | 1.0 | 0.05 | 14.55 | 0.00 | 2.207 | 8.69 | 0.00 | 6.1 | 93.9 | 0.0 | -0.66 | 0.79 | 0.60 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 14.41 | 0.00 | 2.222 | 15.98 | 0.00 | 4.8 | 95.1 | 0.1 | -0.31 | 1.40 | 0.92 | 0.85 | — | 9552 | 1161 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7W0F | 32241 | 2024-01-20 | 2021-11-18 | 4.55 | 8.43 | — | 7.5 | 0.003 | 0.64 | 1.0 | 0.04 | 16.66 | 0.00 | 1.356 | 21.15 | 1.19 | 4.4 | 94.7 | 0.8 | -0.94 | 0.71 | 0.38 | — | 7.3 | 0.003 | 0.71 | 0.0 | 0.04 | 16.67 | 0.00 | 2.081 | 24.89 | 0.00 | 6.4 | 93.5 | 0.1 | -0.87 | 1.54 | 0.87 | 0.71 | — | 14097 | 1492 | 6 | 94 | 0 | 0 | 0 | logfile |
✔ | 8oSL | 17160 | 2024-01-20 | 2023-04-19 | 4.9 | 8.34 | 6.27 | 6.8 | 0.005 | 0.80 | 0.0 | 0.05 | 28.01 | 0.00 | 2.363 | 2.30 | 0.00 | 1.1 | 98.9 | 0.0 | -0.07 | 0.81 | 0.71 | — | 7.0 | 0.012 | 1.04 | 0.0 | 0.06 | 35.58 | 0.01 | 1.810 | 186.47 | 0.00 | 13.0 | 86.5 | 0.5 | -2.30 | 3.51 | 0.87 | 0.83 | — | 13541 | 1441 | 14 | 294 | 0 | 0 | 301 | logfile |
✔ | 6XMG | 22258 | 2024-01-18 | 2020-06-30 | 4.8 | 8.26 | — | 3.9 | 0.002 | 0.53 | 0.0 | 0.03 | 20.81 | 0.00 | 2.187 | 10.77 | 0.00 | 6.7 | 93.3 | 0.0 | -2.01 | 0.90 | 0.74 | — | 3.5 | 0.005 | 0.79 | 0.0 | 0.04 | 22.11 | 0.01 | 1.984 | 45.91 | 0.20 | 11.8 | 88.2 | 0.0 | -1.93 | 0.73 | 0.91 | 0.77 | — | 8361 | 638 | 4 | 154 | 1 | 0 | 0 | logfile |
✔ | 7NXD | 12637 | 2024-01-19 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 14.20 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.003 | 0.78 | 0.0 | 0.05 | 11.16 | 0.00 | 1.951 | 22.24 | 0.00 | 5.7 | 94.3 | 0.0 | -1.10 | 1.48 | 0.89 | 0.72 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |
✔ | 6XoW | 22282 | 2024-01-18 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 6.9 | 0.004 | 0.76 | 0.0 | 0.04 | 13.49 | 0.01 | 2.102 | 27.34 | 0.23 | 4.6 | 95.4 | 0.0 | 0.07 | 1.90 | 0.92 | 0.82 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGG | 22326 | 2024-01-17 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.49 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.44 | 0.0 | 0.03 | 12.76 | 0.00 | 1.973 | 75.99 | 0.00 | 4.7 | 95.3 | 0.0 | 1.92 | 1.72 | 0.66 | 0.70 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 5V4S | 8633 | 2024-01-19 | 2017-03-10 | 4.2 | 7.95 | — | 4.2 | 0.012 | 1.56 | 20.0 | 0.14 | 8.80 | 0.01 | 2.352 | 3.29 | 0.00 | 6.6 | 93.1 | 0.3 | -1.95 | 0.55 | 0.60 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.04 | 10.17 | 0.00 | 2.195 | 12.66 | 0.00 | 2.5 | 97.5 | 0.0 | 2.96 | 0.84 | 0.62 | 0.70 | — | 10756 | 1548 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PFD | 13372 | 2024-01-20 | 2021-08-11 | 4.4 | 7.91 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 29.94 | 0.01 | 2.245 | 6.72 | 0.00 | 2.1 | 97.9 | 0.0 | -0.57 | 0.89 | 0.77 | — | 3.8 | 0.005 | 0.71 | 0.0 | 0.04 | 30.70 | 0.01 | 2.088 | 26.67 | 0.00 | 3.6 | 96.4 | 0.0 | 0.24 | 1.42 | 0.89 | 0.80 | — | 13675 | 843 | 11 | 344 | 0 | 0 | 0 | logfile |
✔ | 8G8B | 29845 | 2024-01-20 | 2023-02-17 | 4.3 | 7.82 | 4.33 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 28.76 | 0.00 | 2.061 | 8.20 | 1.98 | 1.8 | 98.1 | 0.1 | 1.94 | 0.87 | 0.75 | — | 3.2 | 0.007 | 0.74 | 0.0 | 0.04 | 29.00 | 0.01 | 2.105 | 28.71 | 0.00 | 3.3 | 96.7 | 0.0 | 1.11 | 1.96 | 0.90 | 0.82 | — | 14067 | 902 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 7LV9 | 23530 | 2024-01-18 | 2021-02-24 | 4.5 | 7.82 | 4.59 | 4.4 | 0.003 | 0.64 | 0.0 | 0.04 | 27.07 | 0.00 | 1.334 | 3.02 | 0.00 | 3.2 | 96.8 | 0.0 | -3.35 | 0.82 | 0.66 | — | 4.4 | 0.003 | 0.63 | 0.0 | 0.03 | 28.57 | 0.00 | 2.194 | 16.76 | 0.00 | 2.5 | 97.5 | 0.0 | 1.84 | 1.51 | 0.90 | 0.84 | — | 8238 | 581 | 8 | 190 | 0 | 0 | 0 | logfile |
✔ | 6UPK | 20840 | 2024-01-20 | 2019-10-17 | 4.9 | 7.69 | 6.08 | 7.1 | 0.005 | 0.94 | 0.0 | 0.05 | 20.42 | 0.01 | 1.570 | 20.39 | 0.00 | 7.2 | 92.8 | 0.0 | -3.94 | 0.89 | 0.77 | — | 7.0 | 0.003 | 0.66 | 0.0 | 0.04 | 22.43 | 0.00 | 1.939 | 25.70 | 0.00 | 5.4 | 94.6 | 0.0 | -1.54 | 2.95 | 0.90 | 0.83 | — | 13861 | 1314 | 10 | 144 | 54 | 0 | 0 | logfile |
✔ | 7BZW | 30261 | 2024-01-18 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.33 | 0.01 | 2.096 | 25.68 | 0.00 | 15.2 | 84.8 | 0.0 | -3.70 | 1.72 | 0.94 | 0.87 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8i6Q | 35203 | 2024-01-17 | 2023-01-29 | 4.23 | 7.65 | 4.17 | 4.2 | 0.005 | 0.73 | 0.0 | 0.04 | 6.12 | 0.00 | 2.031 | 15.78 | 0.00 | 7.3 | 92.6 | 0.1 | -1.63 | 0.70 | 0.83 | — | 4.3 | 0.006 | 0.81 | 0.0 | 0.04 | 5.74 | 0.00 | 1.976 | 14.06 | 0.00 | 12.3 | 87.4 | 0.3 | -1.52 | 0.96 | 0.69 | 0.83 | — | 3975 | 810 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A64 | 15205 | 2024-01-17 | 2022-06-16 | 4.6 | 7.63 | 4.66 | 4.6 | 0.008 | 0.86 | 0.0 | 0.06 | 10.17 | 0.01 | 2.112 | 20.40 | 0.00 | 5.8 | 94.2 | 0.0 | -1.55 | 0.91 | 0.78 | — | 4.6 | 0.003 | 0.66 | 0.0 | 0.04 | 5.25 | 0.00 | 2.057 | 16.59 | 0.00 | 8.8 | 91.2 | 0.0 | -0.64 | 1.80 | 0.91 | 0.78 | — | 6737 | 1354 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7PFF | 13374 | 2024-01-20 | 2021-08-11 | 4.3 | 7.61 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 30.35 | 0.01 | 2.286 | 8.26 | 0.00 | 1.6 | 98.4 | 0.0 | -0.07 | 0.90 | 0.79 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.04 | 30.99 | 0.00 | 2.198 | 27.46 | 0.00 | 3.7 | 96.3 | 0.0 | 0.66 | 1.83 | 0.89 | 0.81 | — | 12935 | 768 | 10 | 334 | 0 | 0 | 0 | logfile |
✔ | 7T54 | 25694 | 2024-01-18 | 2021-12-11 | 4.5 | 7.46 | 4.54 | 4.6 | 0.004 | 0.70 | 1.0 | 0.05 | 12.14 | 0.00 | 2.078 | 8.94 | 0.68 | 4.4 | 95.5 | 0.1 | 0.70 | 0.62 | 0.64 | — | 4.6 | 0.005 | 0.76 | 0.0 | 0.04 | 11.83 | 0.00 | 2.157 | 21.30 | 0.00 | 9.5 | 90.2 | 0.3 | -0.60 | 1.62 | 0.70 | 0.81 | — | 8552 | 1416 | 4 | 0 | 2 | 0 | 0 | logfile |