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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 1oED | 1044 | 2024-01-17 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 224.94 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.005 | 1.06 | 0.0 | 0.05 | 16.10 | 0.01 | 2.206 | 23.77 | 2.08 | 2.6 | 97.4 | 0.0 | 1.81 | 2.72 | 0.59 | 0.38 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2024-01-17 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 179.94 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.1 | 0.005 | 1.19 | 0.0 | 0.06 | 17.22 | 0.01 | 2.007 | 33.74 | 4.89 | 10.6 | 88.3 | 1.2 | -2.44 | 1.71 | 0.31 | 0.42 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3LoS | 5137 | 2024-01-19 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.005 | 1.29 | 0.0 | 0.06 | 15.90 | 0.01 | 2.091 | 33.18 | 0.00 | 21.9 | 74.2 | 3.9 | -4.38 | 1.32 | 0.63 | 0.56 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3iZK | 5247 | 2024-01-18 | 2010-10-29 | 4.9 | 4.48 | — | 7.1 | 0.014 | 1.48 | 16.0 | 0.08 | 12.45 | 0.02 | 2.461 | 2.38 | 0.77 | 2.0 | 97.5 | 0.4 | -1.62 | 0.65 | 0.48 | — | 6.9 | 0.003 | 0.76 | 0.0 | 0.05 | 13.33 | 0.00 | 2.167 | 26.82 | 0.00 | 4.3 | 95.7 | 0.0 | -0.87 | 2.00 | 0.75 | 0.57 | — | 58448 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J03 | 5138 | 2024-01-18 | 2011-02-10 | 4.8 | 4.09 | — | 6.5 | 0.014 | 1.51 | 16.0 | 0.08 | 13.07 | 0.02 | 2.471 | 3.31 | 1.78 | 3.5 | 96.3 | 0.2 | -1.89 | 0.66 | 0.44 | — | 5.6 | 0.003 | 0.78 | 0.0 | 0.04 | 13.62 | 0.00 | 2.191 | 20.58 | 0.00 | 2.9 | 97.1 | 0.0 | -0.06 | 2.41 | 0.84 | 0.70 | — | 58640 | 7856 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2024-01-19 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.41 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.3 | 0.004 | 0.98 | 3.0 | 0.05 | 20.97 | 0.01 | 1.647 | 17.79 | 5.42 | 7.3 | 90.8 | 1.9 | -2.16 | 1.24 | 0.55 | 0.78 | 1.94 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 3J1B | 5391 | 2024-01-19 | 2012-02-06 | 4.9 | 5.01 | — | 4.8 | 0.034 | 3.60 | 502.0 | 0.21 | 17.58 | 0.03 | 2.352 | 1.73 | 4.08 | 6.4 | 90.1 | 3.5 | -3.28 | 0.67 | 0.51 | — | 4.8 | 0.003 | 0.78 | 0.0 | 0.04 | 15.02 | 0.01 | 2.166 | 12.44 | 0.00 | 5.0 | 94.4 | 0.6 | 0.88 | 2.24 | 0.78 | 0.68 | — | 62992 | 8304 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2024-01-19 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.91 | 0.0 | 0.04 | 18.23 | 0.00 | 1.845 | 75.77 | 12.68 | 22.2 | 74.0 | 3.8 | -4.55 | 0.83 | 0.39 | 0.73 | 1.17 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 3J63 | 5830 | 2024-01-19 | 2013-12-05 | 3.8 | 3.96 | — | 3.9 | 0.005 | 1.25 | 0.0 | 0.07 | 17.40 | 0.00 | 2.184 | 54.83 | 7.31 | 10.3 | 86.7 | 3.1 | -4.14 | 0.71 | 0.65 | 1.05 | 3.9 | 0.004 | 1.00 | 0.0 | 0.04 | 19.21 | 0.00 | 2.205 | 15.46 | 8.22 | 1.3 | 98.7 | 0.0 | -0.47 | 1.91 | 0.79 | 0.76 | 1.14 | 10590 | 1365 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J6E | 5895 | 2024-01-18 | 2014-02-18 | 4.7 | 4.79 | — | 4.7 | 0.021 | 2.60 | 18.0 | 0.13 | 13.52 | 0.01 | 1.539 | 5.62 | 0.28 | 3.4 | 96.2 | 0.4 | -0.68 | 0.62 | 0.66 | — | 4.7 | 0.003 | 0.71 | 0.0 | 0.04 | 14.75 | 0.00 | 1.891 | 18.96 | 0.03 | 2.9 | 97.1 | 0.0 | 0.48 | 2.15 | 0.69 | 0.80 | — | 60984 | 7686 | 54 | 0 | 36 | 72 | 0 | logfile |
✔ | 3J6F | 5896 | 2024-01-18 | 2014-02-19 | 4.9 | 4.97 | — | 4.9 | 0.021 | 2.64 | 64.0 | 0.14 | 14.01 | 0.01 | 2.069 | 5.57 | 0.14 | 3.1 | 96.3 | 0.6 | -1.05 | 0.62 | 0.66 | — | 4.9 | 0.003 | 0.74 | 0.0 | 0.05 | 14.46 | 0.01 | 1.824 | 20.72 | 0.08 | 2.9 | 97.1 | 0.0 | 0.29 | 2.80 | 0.69 | 0.81 | — | 60903 | 7686 | 45 | 9 | 18 | 36 | 0 | logfile |
✔ | 3J6J | 5925 | 2024-01-19 | 2014-03-13 | 3.64 | 4.17 | — | 3.9 | 0.007 | 1.41 | 0.0 | 0.06 | 15.90 | 0.00 | 1.578 | 33.23 | 6.10 | 4.1 | 95.0 | 0.9 | -1.46 | 0.86 | 0.83 | 1.23 | 3.9 | 0.004 | 0.94 | 0.0 | 0.05 | 17.87 | 0.01 | 2.117 | 21.22 | 5.09 | 3.2 | 96.6 | 0.3 | 0.50 | 2.82 | 0.88 | 0.88 | 1.90 | 6344 | 776 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J89 | 6123 | 2024-01-18 | 2014-10-07 | 3.6 | 2.21 | — | 3.5 | 0.022 | 1.64 | 0.0 | 0.10 | 11.97 | 0.01 | 2.578 | 2.11 | 0.00 | 3.5 | 96.5 | 0.0 | -0.96 | 0.83 | 0.81 | 0.77 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 20.46 | 0.00 | 2.181 | 8.86 | 5.51 | 0.4 | 99.6 | 0.0 | 3.23 | 1.98 | 0.81 | 0.79 | 0.27 | 9025 | 551 | 19 | 0 | 0 | 0 | 4598 | logfile |
✔ | 3J8A | 6124 | 2024-01-20 | 2014-10-08 | 3.7 | 3.90 | — | 3.8 | 0.006 | 1.27 | 0.0 | 0.05 | 14.88 | 0.01 | 2.145 | 19.64 | 6.28 | 11.2 | 87.4 | 1.4 | -5.31 | 0.73 | 0.80 | 2.48 | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 16.73 | 0.00 | 1.941 | 15.12 | 6.99 | 6.0 | 93.1 | 0.8 | -2.20 | 0.49 | 0.72 | 0.83 | 1.54 | 15800 | 1835 | 12 | 0 | 280 | 0 | 0 | logfile |
✔ | 3J9D | 6239 | 2024-01-17 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.82 | 0.0 | 0.04 | 17.81 | 0.00 | 2.186 | 15.94 | 5.11 | 6.7 | 92.7 | 0.5 | -1.39 | 2.36 | 0.75 | 0.84 | 2.66 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 3J9E | 6240 | 2024-01-17 | 2015-01-10 | 3.3 | 2.66 | — | 3.3 | 0.032 | 3.28 | 0.0 | 0.09 | 21.31 | 0.02 | 1.223 | 20.81 | 24.26 | 9.8 | 87.3 | 2.9 | -3.41 | 0.77 | 0.88 | 3.26 | 3.3 | 0.004 | 0.77 | 0.0 | 0.04 | 17.77 | 0.00 | 2.236 | 10.82 | 4.58 | 7.8 | 91.7 | 0.6 | 0.72 | 1.59 | 0.73 | 0.86 | 3.06 | 4098 | 520 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5AEY | 2850 | 2024-01-19 | 2015-01-12 | 4.3 | 4.01 | — | 4.0 | 0.011 | 1.71 | 35.0 | 0.11 | 22.05 | 0.01 | 2.197 | 7.01 | 18.45 | 8.7 | 88.5 | 2.8 | -3.27 | 0.64 | 0.81 | — | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 15.48 | 0.00 | 2.126 | 16.08 | 0.00 | 10.1 | 89.6 | 0.3 | -1.46 | 2.59 | 0.63 | 0.77 | — | 12675 | 1590 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 3J9L | 2871 | 2024-01-18 | 2015-02-04 | 4.0 | 4.10 | — | 4.0 | 0.022 | 1.96 | 105.0 | 0.12 | 19.79 | 0.01 | 1.058 | 81.48 | 27.30 | 10.5 | 88.6 | 0.9 | -4.09 | 0.66 | 0.68 | — | 4.0 | 0.045 | 3.09 | 64.0 | 0.12 | 21.30 | 0.02 | 1.887 | 101.09 | 29.26 | 40.4 | 58.0 | 1.7 | -7.66 | 2.88 | 0.73 | 0.82 | — | 112951 | 8688 | 31 | 0 | 8320 | 0 | 0 | logfile |
✔ | 3J9S | 6272 | 2024-01-18 | 2015-02-19 | 2.6 | 3.83 | — | 3.5 | 0.020 | 1.80 | 0.0 | 0.12 | 18.55 | 0.01 | 0.216 | 25.10 | 6.86 | 1.3 | 98.0 | 0.8 | 1.97 | 0.68 | 0.76 | 3.15 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 17.25 | 0.00 | 1.167 | 8.51 | 0.95 | 1.4 | 98.6 | 0.0 | 1.31 | 1.90 | 0.70 | 0.89 | 3.31 | 9813 | 1191 | 3 | 0 | 15 | 315 | 0 | logfile |
✔ | 5AJ3 | 2913 | 2024-01-20 | 2015-02-20 | 3.6 | 3.73 | — | 3.7 | 0.018 | 1.28 | 0.0 | 0.05 | 21.25 | 0.07 | 1.844 | 24.00 | 10.71 | 3.9 | 96.0 | 0.1 | -3.65 | 0.86 | 0.86 | 2.03 | 3.6 | 0.006 | 1.44 | 0.0 | 0.04 | 21.60 | 0.02 | 1.734 | 17.50 | 5.01 | 5.2 | 94.7 | 0.0 | -0.16 | 1.63 | 0.84 | 0.83 | 1.73 | 66363 | 4665 | 44 | 1102 | 1006 | 118 | 0 | logfile |