The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6REC | 4849 | 2023-10-02 | 2019-04-12 | 3.3 | 3.39 | 3.31 | 3.3 | 0.011 | 1.02 | 0.0 | 0.06 | 14.40 | 0.01 | 2.140 | 5.40 | 0.37 | 4.8 | 95.1 | 0.1 | -3.95 | 0.66 | 0.81 | 2.79 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 15.81 | 0.00 | 1.964 | 9.82 | 0.18 | 3.9 | 96.0 | 0.1 | 0.07 | 1.60 | 0.68 | 0.85 | 2.15 | 53756 | 7104 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-10-02 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RE2 | 4839 | 2023-10-02 | 2019-04-12 | 3.2 | 3.21 | — | 3.3 | 0.012 | 1.02 | 0.0 | 0.06 | 14.02 | 0.01 | 1.994 | 5.94 | 0.43 | 4.9 | 94.9 | 0.2 | -3.96 | 0.73 | 0.85 | 2.91 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 15.52 | 0.00 | 2.035 | 9.77 | 0.21 | 3.3 | 96.6 | 0.1 | 0.20 | 1.59 | 0.72 | 0.87 | 2.47 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 7YD1 | 33745 | 2023-10-02 | 2022-07-02 | 2.99 | 2.38 | 7.99 | 2.2 | 0.002 | 0.49 | 0.0 | 0.04 | 9.00 | 0.00 | 2.215 | 6.14 | 5.46 | 10.0 | 90.0 | 0.0 | -4.06 | 0.75 | 0.74 | 3.20 | 2.2 | 0.005 | 0.79 | 0.0 | 0.05 | 14.06 | 0.00 | 2.011 | 11.67 | 2.19 | 10.7 | 89.3 | 0.0 | -2.01 | 0.64 | 0.77 | 0.79 | 3.04 | 3305 | 428 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RDK | 4821 | 2023-10-02 | 2019-04-12 | 3.7 | 3.64 | — | 3.7 | 0.006 | 0.91 | 0.0 | 0.06 | 14.09 | 0.01 | 2.103 | 6.38 | 0.44 | 4.9 | 94.9 | 0.2 | -4.35 | 0.70 | 0.82 | 2.01 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 16.02 | 0.00 | 1.990 | 11.98 | 0.32 | 4.5 | 95.4 | 0.1 | -0.37 | 1.20 | 0.70 | 0.82 | 1.55 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 8EX9 | 28655 | 2023-10-02 | 2022-10-25 | 2.96 | 3.27 | 3.00 | 3.2 | 0.003 | 0.49 | 0.0 | 0.03 | 17.73 | 0.00 | 2.200 | 13.65 | 0.79 | 4.3 | 95.7 | 0.0 | -1.52 | 0.60 | 0.71 | 4.83 | 3.2 | 0.004 | 0.55 | 0.0 | 0.03 | 18.23 | 0.00 | 2.170 | 14.22 | 3.97 | 4.3 | 95.7 | 0.0 | -0.41 | 0.25 | 0.60 | 0.72 | 4.21 | 4199 | 166 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 6HS7 | 0264 | 2023-10-02 | 2018-09-28 | 4.6 | 3.02 | 4.27 | 4.3 | 0.006 | 1.00 | 1.0 | 0.05 | 14.59 | 0.01 | 2.156 | 6.39 | 0.04 | 10.5 | 89.5 | 0.0 | -5.02 | 0.77 | 0.69 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.05 | 0.00 | 2.131 | 10.59 | 0.07 | 7.9 | 92.1 | 0.0 | -2.30 | 0.94 | 0.79 | 0.71 | — | 52890 | 6905 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RE3 | 4840 | 2023-10-02 | 2019-04-12 | 3.3 | 3.43 | 3.51 | 3.4 | 0.012 | 1.02 | 0.0 | 0.06 | 14.02 | 0.01 | 1.994 | 5.94 | 0.43 | 4.9 | 94.9 | 0.2 | -3.96 | 0.69 | 0.80 | 2.37 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 15.89 | 0.00 | 1.929 | 10.59 | 0.41 | 3.9 | 96.0 | 0.1 | 0.13 | 1.23 | 0.71 | 0.86 | 1.86 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 6RE8 | 4845 | 2023-10-02 | 2019-04-12 | 3.8 | 3.75 | — | 3.8 | 0.006 | 0.86 | 0.0 | 0.05 | 14.58 | 0.01 | 1.985 | 5.76 | 0.21 | 4.3 | 95.5 | 0.2 | -4.12 | 0.67 | 0.81 | 1.73 | 3.7 | 0.004 | 0.67 | 0.0 | 0.04 | 16.16 | 0.00 | 1.859 | 12.39 | 0.41 | 4.7 | 95.3 | 0.1 | -0.18 | 1.22 | 0.67 | 0.82 | 1.37 | 53720 | 7099 | 37 | 0 | 11 | 0 | 0 | logfile |
✔ | 8iHK | 35447 | 2023-10-02 | 2023-02-22 | 3.21 | 3.56 | 3.40 | 3.6 | 0.005 | 0.62 | 0.0 | 0.04 | 16.19 | 0.00 | 2.246 | 4.47 | 0.00 | 2.8 | 97.2 | 0.0 | -0.99 | 0.51 | 0.79 | 1.56 | 3.7 | 0.002 | 0.58 | 0.0 | 0.04 | 16.94 | 0.00 | 2.306 | 5.59 | 0.42 | 3.6 | 96.4 | 0.0 | -0.31 | 0.86 | 0.48 | 0.78 | 1.01 | 2253 | 283 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2023-10-02 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 15.02 | 0.00 | 2.243 | 16.86 | 0.00 | 11.2 | 87.5 | 1.2 | -1.85 | 3.09 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 6RD4 | 4805 | 2023-10-02 | 2019-04-12 | 2.9 | 2.95 | — | 2.9 | 0.014 | 1.11 | 0.0 | 0.07 | 14.22 | 0.01 | 0.776 | 6.62 | 0.69 | 4.7 | 95.0 | 0.2 | -5.13 | 0.74 | 0.83 | 3.17 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 16.39 | 0.00 | 1.899 | 10.11 | 1.76 | 3.6 | 96.3 | 0.1 | 0.72 | 0.63 | 0.77 | 0.87 | 2.78 | 107552 | 14206 | 82 | 0 | 22 | 56 | 0 | logfile |
✔ | 7T01 | 25574 | 2023-10-02 | 2021-11-29 | 2.69 | 2.92 | 2.50 | 3.2 | 0.004 | 0.87 | 0.0 | 0.05 | 12.30 | 0.01 | 2.335 | 1.37 | 0.00 | 3.8 | 96.2 | 0.0 | -1.08 | 0.71 | 0.83 | 4.37 | 3.2 | 0.004 | 0.99 | 0.0 | 0.05 | 16.01 | 0.01 | 2.225 | 16.10 | 2.41 | 5.2 | 94.8 | 0.0 | -1.57 | 1.11 | 0.72 | 0.85 | 3.47 | 3343 | 428 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RU4 | 24696 | 2023-10-02 | 2021-08-16 | 3.3 | 3.64 | 3.27 | 3.4 | 0.023 | 1.89 | 0.0 | 0.11 | 9.85 | 0.01 | 2.362 | 0.60 | 0.55 | 3.1 | 96.9 | 0.0 | 0.06 | 0.75 | 0.80 | 3.98 | 3.4 | 0.003 | 0.75 | 0.0 | 0.05 | 15.37 | 0.00 | 2.181 | 10.06 | 0.27 | 6.0 | 94.0 | 0.0 | -0.88 | 1.41 | 0.76 | 0.82 | 2.84 | 3382 | 428 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7oDR | 12845 | 2023-10-02 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 11.20 | 0.02 | 1.963 | 4.98 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.003 | 0.69 | 0.0 | 0.04 | 15.31 | 0.01 | 1.914 | 9.97 | 2.50 | 2.0 | 97.9 | 0.0 | 0.91 | 1.25 | 0.76 | 0.84 | 2.68 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |
✔ | 7Y7K | 33668 | 2023-10-02 | 2022-06-22 | 4.4 | 4.96 | 5.46 | 4.3 | 0.010 | 1.63 | 0.0 | 0.07 | 13.11 | 0.01 | 2.215 | 33.93 | 3.90 | 10.3 | 86.1 | 3.6 | -2.50 | 0.71 | 0.63 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 11.34 | 0.00 | 2.127 | 13.54 | 0.35 | 6.0 | 93.8 | 0.2 | -1.28 | 1.66 | 0.73 | 0.67 | — | 2942 | 422 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YJ5 | 10816 | 2023-10-02 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.22 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.007 | 0.81 | 0.0 | 0.05 | 15.31 | 0.01 | 2.257 | 11.88 | 0.61 | 12.2 | 87.8 | 0.0 | -2.14 | 0.81 | 0.52 | 0.74 | 3.59 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BC5 | 12139 | 2023-10-02 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6REP | 4853 | 2023-10-02 | 2019-04-12 | 3.1 | 3.08 | — | 3.1 | 0.011 | 0.98 | 0.0 | 0.06 | 14.28 | 0.01 | 1.436 | 5.60 | 0.48 | 4.7 | 95.1 | 0.2 | -5.14 | 0.71 | 0.84 | 3.59 | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 15.50 | 0.00 | 1.945 | 8.49 | 0.20 | 3.6 | 96.3 | 0.1 | 0.45 | 0.49 | 0.74 | 0.87 | 2.80 | 53782 | 7104 | 43 | 0 | 11 | 26 | 0 | logfile |
✔ | 6RDN | 4824 | 2023-10-02 | 2019-04-12 | 3.2 | 3.31 | 3.24 | 3.3 | 0.011 | 1.02 | 0.0 | 0.06 | 14.44 | 0.01 | 2.023 | 6.09 | 0.41 | 5.2 | 94.6 | 0.2 | -3.89 | 0.69 | 0.82 | 2.67 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 15.83 | 0.00 | 1.997 | 10.29 | 0.30 | 4.0 | 95.9 | 0.1 | 0.26 | 1.20 | 0.70 | 0.85 | 2.16 | 53748 | 7103 | 37 | 0 | 11 | 0 | 0 | logfile |