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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7K2T | 22644 | 2024-03-15 | 2020-09-09 | 3.6 | 3.72 | — | 3.7 | 0.005 | 0.78 | 0.0 | 0.04 | 14.49 | 0.00 | 1.955 | 9.52 | 0.00 | 4.4 | 95.6 | 0.0 | -3.30 | 0.69 | 0.84 | 2.63 | 3.7 | 0.005 | 0.68 | 0.0 | 0.04 | 16.30 | 0.00 | 1.861 | 10.88 | 2.85 | 4.1 | 95.9 | 0.0 | -0.85 | 0.64 | 0.69 | 0.84 | 2.01 | 10275 | 1249 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 6M39 | 30071 | 2024-03-19 | 2020-03-03 | 3.55 | 3.63 | — | 3.6 | 0.010 | 1.26 | 0.0 | 0.07 | 13.06 | 0.01 | 2.271 | 7.44 | 1.23 | 9.7 | 90.3 | 0.0 | -4.52 | 0.73 | 0.80 | 2.70 | 3.6 | 0.005 | 0.91 | 1.0 | 0.05 | 14.24 | 0.00 | 1.919 | 17.22 | 5.95 | 9.3 | 90.7 | 0.0 | -2.30 | 1.66 | 0.74 | 0.82 | 2.13 | 22716 | 2811 | 6 | 0 | 54 | 0 | 0 | logfile |
✔ | 7WXF | 32877 | 2024-03-11 | 2022-02-14 | 3.6 | 3.96 | 3.68 | 4.0 | 0.007 | 0.79 | 0.0 | 0.05 | 15.05 | 0.00 | 2.123 | 13.40 | 0.29 | 12.6 | 87.1 | 0.2 | -4.85 | 0.72 | 0.79 | 1.44 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 16.02 | 0.00 | 2.199 | 10.79 | 2.46 | 7.2 | 92.8 | 0.0 | -1.37 | 1.20 | 0.71 | 0.77 | 1.52 | 6494 | 860 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LPA | 23474 | 2024-03-17 | 2021-02-11 | 3.37 | 3.43 | 3.23 | 3.5 | 0.009 | 0.88 | 0.0 | 0.05 | 19.64 | 0.00 | 2.201 | 7.90 | 0.00 | 4.1 | 95.9 | 0.0 | -0.82 | 0.56 | 0.75 | 2.45 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 16.80 | 0.00 | 2.251 | 6.13 | 1.67 | 2.9 | 97.1 | 0.0 | 1.04 | 0.37 | 0.62 | 0.75 | 2.08 | 18634 | 2392 | 8 | 0 | 30 | 0 | 0 | logfile |
✔ | 6EZN | 4161 | 2024-03-17 | 2017-11-16 | 3.3 | 3.39 | — | 3.4 | 0.008 | 1.21 | 0.0 | 0.06 | 14.62 | 0.01 | 2.291 | 5.12 | 0.51 | 8.5 | 91.1 | 0.4 | -4.93 | 0.64 | 0.70 | 3.69 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 15.21 | 0.00 | 2.207 | 8.50 | 2.84 | 7.3 | 92.6 | 0.1 | -1.10 | 0.63 | 0.78 | 0.86 | 3.16 | 17008 | 2090 | 17 | 0 | 21 | 0 | 0 | logfile |
✘ | 7CZY | 30521 | 2024-03-21 | 2020-09-09 | 3.3 | 3.38 | — | 3.3 | 0.011 | 1.02 | 0.0 | 0.07 | 17.63 | 0.01 | 1.865 | 25.79 | 12.01 | 10.3 | 87.0 | 2.6 | -3.80 | 0.62 | 0.70 | 1.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31186 | 3880 | 33 | 0 | 76 | 0 | 0 | logfile |
✔ | 7WXi | 32880 | 2024-03-11 | 2022-02-14 | 4.2 | 4.31 | 4.10 | 4.2 | 0.008 | 0.87 | 0.0 | 0.05 | 15.47 | 0.00 | 2.148 | 24.87 | 0.58 | 18.2 | 81.8 | 0.0 | -4.77 | 0.78 | 0.81 | — | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 13.65 | 0.00 | 2.171 | 14.12 | 0.00 | 7.2 | 92.8 | 0.0 | -0.93 | 1.26 | 0.77 | 0.79 | — | 6522 | 862 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZBN | 14587 | 2024-03-24 | 2022-03-23 | 2.62 | 2.72 | 2.63 | 2.7 | 0.006 | 0.55 | 0.0 | 0.04 | 15.39 | 0.00 | 2.062 | 10.53 | 0.00 | 3.0 | 97.0 | 0.0 | 0.32 | 0.71 | 0.81 | 4.18 | 2.7 | 0.004 | 0.53 | 0.0 | 0.04 | 17.14 | 0.00 | 2.010 | 10.31 | 0.81 | 2.3 | 97.7 | 0.0 | 0.57 | 0.38 | 0.72 | 0.84 | 3.88 | 41582 | 2608 | 8 | 0 | 0 | 0 | 20460 | logfile |
✔ | 6RPo | 4979 | 2024-03-20 | 2019-05-14 | 2.39 | 2.44 | — | 2.4 | 0.006 | 0.92 | 0.0 | 0.05 | 15.02 | 0.01 | 2.326 | 7.31 | 0.00 | 3.7 | 95.8 | 0.5 | -2.67 | 0.72 | 0.86 | 4.83 | 2.4 | 0.004 | 0.65 | 0.0 | 0.04 | 17.03 | 0.01 | 2.147 | 3.95 | 1.73 | 3.8 | 95.7 | 0.5 | -1.36 | 0.50 | 0.73 | 0.88 | 4.64 | 101400 | 12060 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N70 | 24214 | 2024-03-11 | 2021-06-09 | 2.8 | 3.43 | 2.92 | 3.3 | 0.005 | 0.73 | 0.0 | 0.05 | 13.22 | 0.01 | 2.109 | 7.93 | 0.00 | 1.6 | 98.4 | 0.0 | 0.27 | 0.74 | 0.85 | 2.88 | 3.3 | 0.003 | 0.56 | 0.0 | 0.04 | 14.95 | 0.00 | 1.919 | 6.69 | 1.50 | 1.7 | 98.3 | 0.0 | 1.76 | 0.40 | 0.63 | 0.77 | 1.98 | 7953 | 1032 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8CYB | 27073 | 2024-03-10 | 2022-05-23 | 2.7 | 3.56 | 2.88 | 3.2 | 0.004 | 0.62 | 1.0 | 0.05 | 19.33 | 0.00 | 1.966 | 7.28 | 0.20 | 5.0 | 94.7 | 0.3 | -0.12 | 0.80 | 0.77 | 1.69 | 3.2 | 0.003 | 0.54 | 1.0 | 0.05 | 13.79 | 0.00 | 1.898 | 8.62 | 0.54 | 5.3 | 94.4 | 0.3 | -0.45 | 0.41 | 0.80 | 0.78 | 2.16 | 54126 | 3432 | 29 | 0 | 114 | 0 | 25897 | logfile |
✔ | 7PSD | 13612 | 2024-03-14 | 2021-09-22 | 3.0 | 3.33 | 2.96 | 3.2 | 0.015 | 1.12 | 0.0 | 0.07 | 14.39 | 0.01 | 2.146 | 7.65 | 0.00 | 5.5 | 94.5 | 0.0 | -1.38 | 0.70 | 0.87 | 2.60 | 3.2 | 0.003 | 0.61 | 0.0 | 0.04 | 16.05 | 0.00 | 2.254 | 9.40 | 2.08 | 2.8 | 97.2 | 0.0 | 1.78 | 0.40 | 0.63 | 0.85 | 2.35 | 9032 | 1160 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N74 | 24219 | 2024-03-11 | 2021-06-09 | 2.8 | 3.52 | 2.84 | 3.3 | 0.006 | 0.89 | 0.0 | 0.10 | 13.21 | 0.01 | 1.844 | 7.52 | 0.00 | 2.2 | 97.8 | 0.0 | 0.74 | 0.75 | 0.84 | 3.27 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 14.45 | 0.00 | 2.171 | 4.80 | 1.69 | 1.8 | 98.2 | 0.0 | 2.41 | 0.54 | 0.68 | 0.82 | 2.46 | 7859 | 1036 | 1 | 0 | 4 | 3 | 0 | logfile |
✔ | 7VFi | 31955 | 2024-03-11 | 2021-09-13 | 3.98 | 5.00 | — | 4.6 | 0.008 | 1.01 | 0.0 | 0.05 | 15.62 | 0.01 | 2.216 | 10.24 | 0.21 | 6.6 | 93.4 | 0.0 | -2.75 | 0.71 | 0.85 | 0.84 | 4.6 | 0.003 | 0.74 | 0.0 | 0.04 | 16.47 | 0.00 | 2.163 | 15.49 | 2.43 | 4.5 | 95.5 | 0.0 | 0.57 | 0.99 | 0.71 | 0.84 | 0.61 | 8903 | 1149 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XMS | 22262 | 2024-03-11 | 2020-06-30 | 3.4 | 4.03 | 3.50 | 3.8 | 0.006 | 1.18 | 0.0 | 0.04 | 12.68 | 0.00 | 1.862 | 6.08 | 0.00 | 4.6 | 95.4 | 0.0 | -2.39 | 0.74 | 0.87 | 2.45 | 3.8 | 0.003 | 0.56 | 0.0 | 0.04 | 14.20 | 0.00 | 1.828 | 4.95 | 1.11 | 3.4 | 96.6 | 0.0 | 0.30 | 0.37 | 0.74 | 0.88 | 1.90 | 8389 | 1091 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7RLJ | 24532 | 2024-03-15 | 2021-07-23 | 3.8 | 4.28 | — | 3.7 | 0.004 | 0.92 | 0.0 | 0.05 | 15.19 | 0.01 | 2.067 | 15.59 | 0.01 | 6.2 | 93.2 | 0.6 | -2.67 | 0.86 | 0.79 | 0.25 | 3.7 | 0.005 | 0.73 | 0.0 | 0.05 | 16.26 | 0.00 | 1.891 | 19.14 | 2.36 | 7.9 | 91.9 | 0.2 | -1.33 | 1.27 | 0.89 | 0.85 | 0.92 | 69156 | 8736 | 24 | 0 | 36 | 0 | 0 | logfile |
✔ | 6SH3 | 10192 | 2024-03-18 | 2019-08-05 | 3.4 | 3.55 | — | 3.5 | 0.006 | 0.91 | 0.0 | 0.05 | 13.40 | 0.01 | 2.287 | 3.59 | 0.62 | 6.5 | 93.5 | 0.0 | -3.29 | 0.70 | 0.80 | 2.63 | 3.5 | 0.002 | 0.64 | 0.0 | 0.04 | 15.63 | 0.01 | 2.261 | 5.62 | 2.87 | 5.6 | 94.4 | 0.0 | -0.67 | 2.17 | 0.70 | 0.82 | 2.52 | 21021 | 2632 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 7o6Q | 12740 | 2024-03-11 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.48 | 0.0 | 0.04 | 14.46 | 0.00 | 2.182 | 4.64 | 1.25 | 0.8 | 99.2 | 0.0 | 3.32 | 0.35 | 0.90 | 0.90 | 5.94 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 5ooF | 3839 | 2024-03-16 | 2017-08-07 | 3.4 | 3.53 | 3.41 | 3.5 | 0.015 | 1.53 | 0.0 | 0.08 | 11.81 | 0.02 | 2.010 | 3.30 | 0.00 | 6.3 | 91.0 | 2.7 | -1.40 | 0.71 | 0.85 | 2.69 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.50 | 0.00 | 2.030 | 8.12 | 1.79 | 3.3 | 96.1 | 0.5 | 0.63 | 1.81 | 0.70 | 0.87 | 1.88 | 14640 | 1855 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6B7N | 7063 | 2024-03-18 | 2017-10-04 | 3.3 | 4.06 | — | 3.6 | 0.008 | 1.14 | 0.0 | 0.07 | 11.30 | 0.01 | 2.171 | 5.41 | 0.78 | 12.1 | 87.5 | 0.4 | -4.33 | 0.88 | 0.85 | 2.77 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 12.09 | 0.00 | 2.104 | 10.88 | 2.29 | 10.2 | 89.4 | 0.4 | -1.36 | 0.48 | 0.88 | 0.86 | 2.17 | 22215 | 2898 | 21 | 0 | 57 | 0 | 0 | logfile |