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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZX8 | 15007 | 2024-03-25 | 2022-05-20 | 3.0 | 3.43 | 3.02 | 3.0 | 0.005 | 0.61 | 0.0 | 0.04 | 17.02 | 0.00 | 1.635 | 8.49 | 0.15 | 4.0 | 96.0 | 0.0 | 0.47 | 0.84 | 0.80 | 2.23 | 3.0 | 0.006 | 0.75 | 0.0 | 0.05 | 18.19 | 0.00 | 1.880 | 13.91 | 1.60 | 3.9 | 96.1 | 0.0 | 0.44 | 1.35 | 0.87 | 0.86 | 2.36 | 49534 | 5841 | 32 | 126 | 12 | 0 | 0 | logfile |
✔ | 7Z1M | 14448 | 2024-03-24 | 2022-02-24 | 3.4 | 3.57 | 3.50 | 3.5 | 0.004 | 0.69 | 0.0 | 0.05 | 15.31 | 0.00 | 2.100 | 4.76 | 0.00 | 3.3 | 96.7 | 0.0 | -0.32 | 0.88 | 0.84 | 2.45 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 16.52 | 0.00 | 2.024 | 7.93 | 1.10 | 3.0 | 96.9 | 0.0 | 0.45 | 0.29 | 0.89 | 0.86 | 2.15 | 42122 | 5153 | 26 | 53 | 10 | 0 | 0 | logfile |
✔ | 6KQo | 0754 | 2024-03-12 | 2019-08-18 | 2.52 | 3.75 | — | 3.2 | 0.019 | 1.16 | 0.0 | 0.07 | 16.22 | 0.00 | 1.883 | 10.69 | 0.03 | 9.4 | 90.6 | 0.0 | -5.07 | 0.87 | 0.85 | 3.52 | 3.3 | 0.005 | 0.85 | 2.0 | 0.13 | 15.22 | 0.00 | 1.773 | 10.11 | 1.69 | 4.4 | 95.6 | 0.0 | -0.22 | 1.66 | 0.85 | 0.85 | 3.22 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7K1J | 22624 | 2024-03-23 | 2020-09-07 | 3.9 | 3.96 | — | 3.9 | 0.010 | 1.24 | 0.0 | 0.07 | 17.73 | 0.01 | 2.066 | 7.83 | 1.09 | 14.5 | 85.0 | 0.5 | -5.24 | 0.68 | 0.71 | 1.17 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 18.44 | 0.00 | 2.059 | 11.33 | 3.10 | 10.8 | 89.2 | 0.0 | -2.04 | 1.31 | 0.69 | 0.71 | 0.66 | 38040 | 4600 | 7 | 74 | 0 | 0 | 0 | logfile |
✔ | 6oQR | 20167 | 2024-03-23 | 2019-04-29 | 3.1 | 3.49 | — | 3.3 | 0.010 | 0.90 | 3.0 | 0.05 | 14.88 | 0.00 | 1.753 | 4.66 | 2.50 | 3.5 | 96.5 | 0.0 | -2.47 | 0.77 | 0.86 | 3.56 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 15.99 | 0.00 | 1.948 | 8.08 | 1.83 | 2.7 | 97.3 | 0.0 | 0.63 | 1.26 | 0.80 | 0.89 | 2.50 | 36951 | 4849 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 7ZX7 | 15006 | 2024-03-25 | 2022-05-20 | 3.4 | 4.37 | 3.42 | 3.0 | 0.004 | 0.52 | 0.0 | 0.04 | 17.07 | 0.00 | 1.385 | 9.44 | 0.00 | 3.0 | 97.0 | 0.0 | 1.17 | 0.88 | 0.76 | 0.98 | 3.0 | 0.006 | 0.75 | 0.0 | 0.04 | 18.10 | 0.00 | 1.931 | 18.80 | 1.44 | 4.1 | 95.9 | 0.0 | 0.82 | 2.27 | 0.91 | 0.85 | 1.46 | 49277 | 5789 | 32 | 132 | 12 | 0 | 0 | logfile |
✔ | 6U2J | 20620 | 2024-03-16 | 2019-08-20 | 2.37 | 2.47 | 2.57 | 2.4 | 0.007 | 0.90 | 0.0 | 0.06 | 10.40 | 0.01 | 2.320 | 4.14 | 0.41 | 4.8 | 95.2 | 0.0 | -3.36 | 0.79 | 0.83 | 4.12 | 2.4 | 0.003 | 0.70 | 0.0 | 0.04 | 14.52 | 0.00 | 2.240 | 8.05 | 2.43 | 3.8 | 96.2 | 0.0 | -0.08 | 0.67 | 0.80 | 0.86 | 3.85 | 71744 | 9200 | 48 | 0 | 48 | 0 | 0 | logfile |
✔ | 8DBW | 27311 | 2024-03-23 | 2022-06-14 | 4.1 | 4.40 | 4.02 | 4.1 | 0.004 | 0.81 | 1.0 | 0.05 | 14.49 | 0.01 | 2.029 | 2.84 | 1.10 | 2.2 | 97.7 | 0.1 | -0.09 | 0.75 | 0.79 | — | 4.1 | 0.004 | 0.67 | 0.0 | 0.04 | 13.69 | 0.00 | 1.908 | 12.17 | 0.00 | 3.6 | 96.4 | 0.0 | 0.51 | 1.35 | 0.76 | 0.83 | — | 36835 | 4837 | 28 | 0 | 11 | 0 | 0 | logfile |
✘ | 8iXL | 35795 | 2024-03-15 | 2023-04-01 | 3.5 | 3.61 | 3.45 | 3.6 | 0.012 | 1.48 | 0.0 | 0.10 | 11.65 | 0.00 | 2.568 | 2.07 | 0.00 | 0.4 | 99.6 | 0.0 | 2.40 | 0.71 | 0.84 | 1.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10970 | 1455 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oQW | 20172 | 2024-03-23 | 2019-04-29 | 3.1 | 3.49 | — | 3.3 | 0.005 | 0.82 | 5.0 | 0.05 | 14.56 | 0.00 | 1.924 | 4.66 | 1.75 | 3.3 | 96.6 | 0.1 | -2.30 | 0.77 | 0.83 | 2.57 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.86 | 0.00 | 1.972 | 8.60 | 2.15 | 3.0 | 97.0 | 0.0 | 0.85 | 0.76 | 0.78 | 0.87 | 2.29 | 36901 | 4847 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 7AFH | 11765 | 2024-03-17 | 2020-09-19 | 3.59 | 4.69 | 6.65 | 2.8 | 0.009 | 0.89 | 2.0 | 0.05 | 22.97 | 0.02 | 1.752 | 32.75 | 0.00 | 7.5 | 92.5 | 0.0 | -2.59 | 0.88 | 0.82 | 0.54 | 2.8 | 0.005 | 0.78 | 0.0 | 0.04 | 22.85 | 0.01 | 1.772 | 28.38 | 3.92 | 5.8 | 94.2 | 0.0 | -1.06 | 1.29 | 0.89 | 0.86 | 0.95 | 18482 | 1103 | 11 | 456 | 12 | 0 | 0 | logfile |
✔ | 6UoX | 20834 | 2024-03-14 | 2019-10-15 | 4.02 | 4.28 | — | 4.1 | 0.010 | 1.18 | 1.0 | 0.08 | 14.59 | 0.01 | 2.461 | 0.89 | 0.00 | 8.2 | 91.8 | 0.0 | -4.01 | 0.66 | 0.78 | — | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 12.05 | 0.00 | 2.186 | 8.54 | 0.00 | 6.7 | 93.3 | 0.0 | -1.94 | 0.68 | 0.69 | 0.81 | — | 9138 | 1161 | 4 | 0 | 14 | 0 | 0 | logfile |
✔ | 6oQT | 20169 | 2024-03-23 | 2019-04-29 | 3.1 | 3.48 | — | 3.3 | 0.008 | 0.86 | 1.0 | 0.05 | 14.49 | 0.00 | 1.781 | 3.86 | 1.96 | 2.9 | 97.1 | 0.0 | -2.11 | 0.78 | 0.88 | 3.44 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.91 | 0.00 | 1.974 | 6.91 | 1.51 | 2.1 | 97.9 | 0.0 | 1.07 | 1.24 | 0.79 | 0.89 | 2.34 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 7Ui9 | 26542 | 2024-03-12 | 2022-03-28 | 3.3 | 4.81 | 3.23 | 2.8 | 0.004 | 0.69 | 0.0 | 0.05 | 13.63 | 0.01 | 0.850 | 9.75 | 0.06 | 1.9 | 98.0 | 0.1 | 0.62 | 0.59 | 0.52 | 0.82 | 2.8 | 0.003 | 0.63 | 0.0 | 0.04 | 14.86 | 0.00 | 2.125 | 13.05 | 0.80 | 3.0 | 97.0 | 0.0 | 1.30 | 0.52 | 0.81 | 0.79 | 0.72 | 63137 | 7857 | 33 | 0 | 0 | 0 | 0 | logfile |
✘ | 8ENo | 28275 | 2024-03-17 | 2022-09-30 | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16485 | 2047 | 9 | 0 | 9 | 0 | 0 | logfile |
✔ | 6oQV | 20171 | 2024-03-23 | 2019-04-29 | 3.3 | 3.60 | — | 3.4 | 0.010 | 0.94 | 1.0 | 0.05 | 14.89 | 0.00 | 1.740 | 5.27 | 2.95 | 4.1 | 95.9 | 0.0 | -2.77 | 0.76 | 0.85 | 3.07 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.89 | 0.00 | 1.943 | 7.90 | 2.66 | 2.4 | 97.6 | 0.0 | 0.84 | 1.26 | 0.79 | 0.89 | 2.33 | 36971 | 4851 | 28 | 0 | 12 | 0 | 0 | logfile |
✔ | 7PC2 | 13316 | 2024-03-20 | 2021-08-03 | 2.8 | 3.39 | — | 6.5 | 0.033 | 1.66 | 5.0 | 0.06 | 19.87 | 0.01 | 1.809 | 9.01 | 1.49 | 7.8 | 92.2 | 0.0 | -3.81 | 0.43 | 0.05 | -0.14 | 2.8 | 0.004 | 0.92 | 0.0 | 0.05 | 15.28 | 0.00 | 2.070 | 15.63 | 2.61 | 6.8 | 93.2 | 0.0 | -1.15 | 1.37 | 0.58 | 0.35 | 0.25 | 27063 | 3093 | 68 | 0 | 210 | 0 | 0 | logfile |
✔ | 7PW9 | 13679 | 2024-03-17 | 2021-10-06 | 3.12 | 3.26 | — | 3.2 | 0.004 | 0.67 | 0.0 | 0.16 | 15.15 | 0.00 | 2.021 | 5.77 | 0.07 | 3.3 | 96.6 | 0.0 | 1.77 | 0.73 | 0.79 | 1.98 | 3.3 | 0.002 | 0.50 | 0.0 | 0.04 | 15.14 | 0.00 | 1.966 | 4.46 | 1.15 | 2.5 | 97.5 | 0.0 | 2.24 | 0.90 | 0.74 | 0.83 | 2.19 | 16339 | 2066 | 4 | 0 | 199 | 0 | 0 | logfile |
✔ | 6MUX | 9259 | 2024-03-11 | 2018-10-23 | 3.9 | 4.13 | 3.88 | 4.0 | 0.009 | 1.22 | 0.0 | 0.07 | 15.13 | 0.01 | 2.149 | 7.40 | 0.80 | 11.0 | 88.9 | 0.2 | -4.69 | 0.77 | 0.82 | 1.35 | 4.0 | 0.003 | 0.69 | 0.0 | 0.04 | 17.34 | 0.00 | 2.062 | 13.69 | 3.11 | 5.6 | 94.4 | 0.0 | -1.47 | 3.98 | 0.78 | 0.82 | 1.04 | 60284 | 7501 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E1M | 27825 | 2024-03-10 | 2022-08-10 | 2.9 | 3.48 | 2.86 | 3.2 | 0.007 | 0.77 | 0.0 | 0.04 | 14.84 | 0.00 | 2.179 | 7.34 | 0.00 | 2.7 | 97.3 | 0.0 | -0.83 | 0.69 | 0.86 | 4.21 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 15.18 | 0.00 | 2.236 | 9.04 | 1.29 | 2.9 | 97.1 | 0.0 | 1.87 | 0.60 | 0.65 | 0.85 | 3.20 | 5691 | 760 | 7 | 0 | 2 | 0 | 0 | logfile |