The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VQo | 32091 | 2024-03-23 | 2021-10-20 | 2.19 | 3.23 | 2.29 | 3.0 | 0.008 | 0.75 | 0.0 | 0.05 | 17.42 | 0.00 | 1.865 | 12.17 | 3.25 | 9.3 | 90.7 | 0.0 | -1.44 | 0.58 | 0.80 | 3.45 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.35 | 0.00 | 1.978 | 10.74 | 2.79 | 7.7 | 92.3 | 0.0 | -0.77 | 0.28 | 0.57 | 0.79 | 3.36 | 38640 | 4720 | 12 | 0 | 4 | 688 | 0 | logfile |
✔ | 7ZXY | 15017 | 2024-03-16 | 2022-05-23 | 3.15 | 2.97 | 3.04 | 3.0 | 0.006 | 0.94 | 0.0 | 0.05 | 16.23 | 0.01 | 2.106 | 10.77 | 0.00 | 3.5 | 96.5 | 0.0 | -0.44 | 0.74 | 0.81 | 3.20 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 15.59 | 0.00 | 2.090 | 8.99 | 0.64 | 3.3 | 96.7 | 0.0 | 0.47 | 0.31 | 0.74 | 0.85 | 2.74 | 15606 | 1913 | 25 | 0 | 23 | 0 | 0 | logfile |
✔ | 6Bo8 | 7120 | 2024-03-17 | 2017-11-18 | 3.6 | 3.64 | — | 3.6 | 0.008 | 1.19 | 0.0 | 0.06 | 10.83 | 0.01 | 2.286 | 7.28 | 0.97 | 11.0 | 89.0 | 0.0 | -4.49 | 0.56 | 0.62 | 1.58 | 3.6 | 0.003 | 0.79 | 0.0 | 0.04 | 15.96 | 0.00 | 2.154 | 11.77 | 3.15 | 10.4 | 89.6 | 0.0 | -0.45 | 1.31 | 0.74 | 0.80 | 1.83 | 19048 | 2372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VHQ | 32003 | 2024-03-17 | 2021-09-22 | 3.27 | 3.68 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 13.43 | 0.00 | 2.165 | 9.53 | 0.00 | 3.1 | 96.9 | 0.0 | 1.82 | 0.73 | 0.82 | 1.67 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.58 | 0.00 | 2.142 | 9.29 | 1.77 | 3.5 | 96.5 | 0.0 | 2.07 | 1.13 | 0.74 | 0.84 | 1.52 | 16650 | 2076 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELA | 31178 | 2024-03-15 | 2021-04-09 | 3.4 | 3.44 | — | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.71 | 0.00 | 2.153 | 11.82 | 2.79 | 7.9 | 92.1 | 0.0 | -2.61 | 0.72 | 0.78 | 2.61 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 16.92 | 0.00 | 2.175 | 13.26 | 3.02 | 7.0 | 93.0 | 0.0 | -0.18 | 0.47 | 0.73 | 0.82 | 2.31 | 11791 | 1451 | 5 | 7 | 3 | 0 | 0 | logfile |
✔ | 6L7A | 0841 | 2024-03-18 | 2019-11-01 | 3.38 | 3.58 | — | 3.5 | 0.005 | 0.84 | 0.0 | 0.05 | 14.70 | 0.01 | 2.395 | 4.54 | 0.42 | 5.1 | 94.9 | 0.0 | -4.67 | 0.75 | 0.84 | 2.76 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 16.45 | 0.00 | 2.108 | 9.17 | 2.88 | 4.1 | 95.9 | 0.0 | 0.19 | 0.54 | 0.73 | 0.84 | 1.95 | 19701 | 2538 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NoG | 0468 | 2024-03-18 | 2019-01-16 | 3.9 | 4.05 | 4.50 | 3.9 | 0.009 | 1.12 | 1.0 | 0.06 | 26.64 | 0.01 | 2.239 | 6.27 | 0.84 | 4.1 | 95.9 | 0.0 | -1.83 | 0.84 | 0.81 | 0.53 | 3.9 | 0.004 | 0.63 | 0.0 | 0.03 | 26.53 | 0.00 | 2.168 | 10.94 | 2.52 | 2.6 | 97.4 | 0.0 | 1.71 | 1.75 | 0.86 | 0.85 | 0.64 | 14929 | 1124 | 12 | 292 | 0 | 0 | 0 | logfile |
✔ | 6Qi9 | 4553 | 2024-03-16 | 2019-01-18 | 4.63 | 4.71 | — | 4.6 | 0.007 | 1.09 | 0.0 | 0.06 | 17.10 | 0.01 | 1.993 | 10.33 | 0.39 | 9.0 | 91.0 | 0.0 | -4.28 | 0.82 | 0.82 | — | 4.6 | 0.003 | 0.73 | 0.0 | 0.04 | 15.24 | 0.00 | 2.085 | 14.12 | 0.00 | 6.5 | 93.5 | 0.0 | -1.38 | 0.77 | 0.82 | 0.81 | — | 14559 | 1879 | 11 | 0 | 5 | 0 | 0 | logfile |
✔ | 7WVY | 32862 | 2024-03-11 | 2022-02-11 | 3.0 | 2.82 | — | 3.0 | 0.003 | 0.51 | 0.0 | 0.04 | 12.97 | 0.00 | 2.251 | 9.20 | 0.13 | 1.9 | 98.1 | 0.0 | 0.72 | 0.59 | 0.73 | 2.50 | 3.0 | 0.004 | 0.64 | 0.0 | 0.04 | 15.75 | 0.00 | 2.143 | 12.38 | 3.20 | 2.3 | 97.7 | 0.0 | 0.56 | 0.57 | 0.61 | 0.80 | 2.90 | 7094 | 922 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o7i | 0642 | 2024-03-18 | 2019-03-07 | 3.2 | 3.32 | — | 3.3 | 0.012 | 1.17 | 0.0 | 0.07 | 13.65 | 0.01 | 2.131 | 7.58 | 1.03 | 8.2 | 91.8 | 0.0 | -4.50 | 0.71 | 0.77 | 3.69 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 16.05 | 0.00 | 2.173 | 8.92 | 2.46 | 5.6 | 94.4 | 0.0 | -0.90 | 1.71 | 0.74 | 0.83 | 2.65 | 20276 | 2377 | 15 | 49 | 97 | 0 | 0 | logfile |
✔ | 6ZB5 | 11145 | 2024-03-19 | 2020-06-07 | 2.85 | 2.93 | 2.86 | 2.9 | 0.009 | 0.77 | 1.0 | 0.06 | 18.16 | 0.01 | 1.985 | 2.81 | 3.76 | 7.6 | 92.4 | 0.0 | -3.22 | 0.77 | 0.85 | 3.59 | 2.9 | 0.003 | 0.60 | 0.0 | 0.05 | 16.79 | 0.00 | 2.204 | 2.15 | 2.89 | 5.3 | 94.7 | 0.0 | -1.01 | 1.12 | 0.77 | 0.87 | 3.48 | 24499 | 3096 | 9 | 0 | 29 | 0 | 0 | logfile |
✔ | 7A8P | 11679 | 2024-03-11 | 2020-08-30 | 3.5 | 3.61 | 3.44 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 16.13 | 0.00 | 2.165 | 2.86 | 0.63 | 2.2 | 97.8 | 0.0 | 0.97 | 0.73 | 0.78 | 1.97 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 17.03 | 0.01 | 2.085 | 9.48 | 2.78 | 2.1 | 97.9 | 0.0 | 2.23 | 0.49 | 0.74 | 0.80 | 2.21 | 7305 | 911 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7RYR | 24746 | 2024-03-17 | 2021-08-26 | 3.6 | 3.52 | — | 3.6 | 0.007 | 1.12 | 4.0 | 0.06 | 19.14 | 0.01 | 2.197 | 7.18 | 0.60 | 7.0 | 93.0 | 0.0 | -1.65 | 0.76 | 0.81 | 1.67 | 3.6 | 0.002 | 0.66 | 0.0 | 0.04 | 16.71 | 0.00 | 2.230 | 5.72 | 3.83 | 4.5 | 95.5 | 0.0 | 0.39 | 0.54 | 0.76 | 0.82 | 1.41 | 13024 | 1556 | 8 | 0 | 32 | 0 | 0 | logfile |
✔ | 7Y5N | 33621 | 2024-03-15 | 2022-06-17 | 3.45 | 3.26 | 3.40 | 3.3 | 0.005 | 0.69 | 0.0 | 0.05 | 14.10 | 0.01 | 2.249 | 4.70 | 5.43 | 5.5 | 94.5 | 0.0 | -1.51 | 0.77 | 0.79 | 2.83 | 3.3 | 0.004 | 0.61 | 0.0 | 0.05 | 14.80 | 0.00 | 2.119 | 7.46 | 4.52 | 5.9 | 94.1 | 0.0 | -0.70 | 0.56 | 0.78 | 0.83 | 2.44 | 13034 | 1639 | 6 | 0 | 20 | 0 | 0 | logfile |
✔ | 5BKi | 9405 | 2024-03-17 | 2021-03-19 | 3.1 | 3.21 | — | 3.2 | 0.010 | 1.04 | 0.0 | 0.06 | 15.84 | 0.01 | 2.252 | 4.46 | 0.44 | 5.4 | 94.6 | 0.0 | -5.10 | 0.70 | 0.85 | 3.65 | 3.2 | 0.003 | 0.53 | 0.0 | 0.05 | 16.15 | 0.00 | 2.133 | 5.79 | 0.93 | 3.3 | 96.7 | 0.0 | 0.10 | 1.60 | 0.65 | 0.85 | 2.69 | 16933 | 2156 | 20 | 0 | 21 | 4 | 0 | logfile |
✔ | 7RU0 | 24692 | 2024-03-17 | 2021-08-16 | 4.3 | 3.77 | — | 4.2 | 0.005 | 1.12 | 0.0 | 0.06 | 14.47 | 0.01 | 2.146 | 8.30 | 0.00 | 6.9 | 93.1 | 0.0 | -3.06 | 0.48 | 0.48 | — | 4.2 | 0.004 | 0.89 | 0.0 | 0.05 | 14.43 | 0.01 | 2.123 | 12.33 | 0.00 | 6.5 | 93.5 | 0.0 | -1.22 | 1.50 | 0.62 | 0.63 | — | 12284 | 1536 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 6Qi8 | 4552 | 2024-03-16 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.27 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6W8N | 21575 | 2024-03-10 | 2020-03-20 | 3.2 | 3.39 | — | 3.3 | 0.007 | 0.77 | 0.0 | 0.05 | 16.69 | 0.00 | 2.244 | 12.74 | 8.14 | 7.1 | 92.9 | 0.0 | -2.74 | 0.61 | 0.85 | 1.84 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.90 | 0.00 | 2.262 | 8.81 | 7.09 | 5.2 | 94.8 | 0.0 | 0.60 | 0.90 | 0.60 | 0.86 | 2.27 | 6160 | 804 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oPA | 17046 | 2024-03-23 | 2023-04-07 | 3.34 | 3.71 | 3.54 | 3.7 | 0.006 | 0.86 | 0.0 | 0.05 | 16.75 | 0.00 | 2.391 | 7.55 | 0.00 | 5.0 | 95.0 | 0.0 | -2.04 | 0.66 | 0.84 | 2.44 | 3.7 | 0.003 | 0.70 | 0.0 | 0.04 | 18.16 | 0.00 | 2.124 | 7.24 | 2.48 | 4.6 | 95.4 | 0.0 | -0.63 | 0.57 | 0.66 | 0.83 | 2.10 | 34992 | 4344 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PKo | 13474 | 2024-03-18 | 2021-08-26 | 3.9 | 4.01 | — | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 14.59 | 0.00 | 2.205 | 10.80 | 0.00 | 7.5 | 92.5 | 0.0 | -4.16 | 0.76 | 0.82 | 2.59 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.19 | 0.00 | 2.162 | 10.87 | 3.74 | 4.8 | 95.2 | 0.0 | -0.51 | 0.58 | 0.75 | 0.81 | 2.25 | 20368 | 2504 | 8 | 0 | 0 | 0 | 0 | logfile |