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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8T2V | 40989 | 2023-08-13 | 2023-06-06 | 3.4 | 4.28 | 3.49 | 3.7 | 0.016 | 1.93 | 1.0 | 0.10 | 17.05 | 0.01 | 1.751 | 11.21 | 5.50 | 9.1 | 90.0 | 1.0 | -1.99 | 0.91 | 0.84 | 2.12 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 16.81 | 0.00 | 1.979 | 10.43 | 0.00 | 6.3 | 93.5 | 0.1 | -0.63 | 1.15 | 0.91 | 0.84 | 2.10 | 13134 | 1664 | 10 | 0 | 34 | 6 | 0 | logfile |
✔ | 8T2U | 40988 | 2023-08-10 | 2023-06-06 | 3.1 | 3.94 | 3.08 | 3.5 | 0.014 | 1.65 | 0.0 | 0.08 | 17.06 | 0.01 | 1.807 | 30.14 | 4.62 | 8.1 | 91.6 | 0.2 | -2.18 | 0.85 | 0.77 | 1.42 | 3.6 | 0.004 | 0.74 | 0.0 | 0.05 | 16.84 | 0.00 | 1.871 | 22.60 | 0.29 | 7.6 | 92.3 | 0.1 | -1.59 | 0.54 | 0.83 | 0.72 | 1.25 | 6552 | 822 | 8 | 0 | 21 | 2 | 0 | logfile |
✔ | 8T1o | 40973 | 2023-08-13 | 2023-06-02 | 3.3 | 3.56 | 3.30 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 14.79 | 0.00 | 2.146 | 8.73 | 0.00 | 3.0 | 96.9 | 0.1 | 0.93 | 0.60 | 0.69 | 1.99 | 3.5 | 0.004 | 0.58 | 0.0 | 0.04 | 16.24 | 0.00 | 2.146 | 9.05 | 0.20 | 3.3 | 96.7 | 0.1 | 0.77 | 0.96 | 0.70 | 0.84 | 1.91 | 13800 | 1727 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8T1F | 40962 | 2023-08-16 | 2023-06-02 | 3.49 | 3.75 | 3.60 | 3.7 | 0.007 | 1.37 | 0.0 | 0.06 | 14.05 | 0.01 | 2.171 | 4.71 | 0.85 | 11.6 | 87.7 | 0.6 | -5.59 | 0.62 | 0.82 | 3.07 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 15.92 | 0.00 | 2.125 | 10.83 | 0.31 | 9.5 | 90.2 | 0.2 | -1.34 | 1.17 | 0.68 | 0.85 | 2.23 | 20790 | 2542 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 8T1E | 40961 | 2023-08-17 | 2023-06-02 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22115 | 2516 | 12 | 0 | 43 | 36 | 0 | logfile |
✔ | 8T1D | 40960 | 2023-08-16 | 2023-06-02 | 3.35 | 3.74 | 3.50 | 3.7 | 0.027 | 1.47 | 0.0 | 0.21 | 12.15 | 0.01 | 2.170 | 6.09 | 0.72 | 12.2 | 87.1 | 0.6 | -5.63 | 0.57 | 0.77 | 2.57 | 3.7 | 0.004 | 1.07 | 0.0 | 0.09 | 15.79 | 0.00 | 1.971 | 16.99 | 0.54 | 11.6 | 87.9 | 0.6 | -2.21 | 0.76 | 0.57 | 0.80 | 1.98 | 20338 | 2502 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 8T1B | 40958 | 2023-08-17 | 2023-06-02 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23180 | 2576 | 12 | 0 | 52 | 72 | 0 | logfile |
✔ | 8SZB | 40907 | 2023-08-09 | 2023-05-29 | 3.07 | 3.36 | 3.01 | 3.5 | 0.003 | 0.51 | 0.0 | 0.03 | 16.92 | 0.00 | 2.154 | 9.22 | 0.37 | 1.5 | 98.5 | 0.0 | 2.06 | 0.49 | 0.73 | 0.50 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 17.63 | 0.00 | 2.065 | 8.54 | 0.00 | 1.8 | 98.2 | 0.0 | 4.01 | 0.70 | 0.51 | 0.79 | 1.65 | 4962 | 612 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 8SZA | 40905 | 2023-08-09 | 2023-05-29 | 2.75 | 3.32 | 2.81 | 3.4 | 0.003 | 0.65 | 0.0 | 0.03 | 14.83 | 0.00 | 2.185 | 8.19 | 0.98 | 0.3 | 99.7 | 0.0 | 2.12 | 0.50 | 0.78 | 1.28 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.68 | 0.00 | 2.280 | 8.99 | 2.16 | 0.7 | 99.3 | 0.0 | 2.68 | 0.49 | 0.50 | 0.78 | 1.33 | 4800 | 606 | 11 | 0 | 6 | 0 | 0 | logfile |
✔ | 8SYi | 40874 | 2023-08-20 | 2023-05-25 | 2.94 | 3.75 | 3.00 | 3.4 | 0.004 | 0.64 | 0.0 | 0.04 | 20.53 | 0.01 | 2.138 | 6.87 | 6.06 | 7.7 | 91.9 | 0.3 | -1.52 | 0.89 | 0.87 | 2.21 | 3.5 | 0.005 | 0.67 | 0.0 | 0.04 | 19.90 | 0.01 | 2.096 | 8.77 | 5.49 | 7.9 | 91.9 | 0.3 | -0.82 | 0.59 | 0.87 | 0.89 | 2.03 | 29500 | 3537 | 12 | 91 | 3 | 0 | 0 | logfile |
✔ | 8SW7 | 40810 | 2023-08-13 | 2023-05-17 | 3.37 | 3.85 | 3.96 | 3.9 | 0.022 | 1.72 | 0.0 | 0.13 | 10.03 | 0.01 | 2.188 | 1.14 | 0.14 | 2.2 | 97.8 | 0.1 | 0.77 | 0.58 | 0.77 | 2.95 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 15.86 | 0.00 | 2.179 | 9.70 | 0.34 | 3.5 | 96.5 | 0.0 | -0.76 | 1.33 | 0.52 | 0.78 | 1.98 | 15133 | 1664 | 17 | 0 | 289 | 0 | 0 | logfile |
✔ | 8SUG | 40765 | 2023-08-11 | 2023-05-12 | 4.2 | 4.70 | 4.24 | 4.6 | 0.002 | 0.73 | 0.0 | 0.04 | 13.57 | 0.00 | 2.137 | 16.90 | 0.13 | 8.4 | 91.3 | 0.3 | -2.39 | 0.51 | 0.77 | — | 4.6 | 0.003 | 0.79 | 0.0 | 0.04 | 13.58 | 0.00 | 1.962 | 22.68 | 0.26 | 9.9 | 89.9 | 0.2 | -0.75 | 0.89 | 0.51 | 0.78 | — | 113355 | 15972 | 33 | 0 | 0 | 0 | 0 | logfile |
✔ | 8STE | 40759 | 2023-08-09 | 2023-05-10 | 3.34 | 3.55 | 3.29 | 3.5 | 0.005 | 0.69 | 0.0 | 0.04 | 14.38 | 0.00 | 1.979 | 10.65 | 0.00 | 6.2 | 93.8 | 0.0 | -0.32 | 0.57 | 0.80 | 2.57 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 16.32 | 0.00 | 2.278 | 8.95 | 0.16 | 6.0 | 94.0 | 0.0 | 0.02 | 1.20 | 0.57 | 0.83 | 2.10 | 5816 | 712 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8SRM | 40735 | 2023-08-09 | 2023-05-05 | 4.46 | 5.07 | 4.47 | 4.4 | 0.003 | 0.51 | 0.0 | 0.03 | 4.38 | 0.00 | 2.233 | 4.32 | 0.00 | 4.0 | 96.0 | 0.0 | 2.57 | 0.82 | 0.84 | — | 4.3 | 0.006 | 0.64 | 0.0 | 0.04 | 5.47 | 0.00 | 2.070 | 5.40 | 0.00 | 7.2 | 92.8 | 0.0 | -0.25 | 1.59 | 0.83 | 0.86 | — | 5773 | 1163 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SPS | 40683 | 2023-08-14 | 2023-05-03 | 3.0 | 3.64 | 3.06 | 3.4 | 0.008 | 0.88 | 3.0 | 0.05 | 27.06 | 0.01 | 0.574 | 10.67 | 0.53 | 4.6 | 95.3 | 0.1 | -0.87 | 0.84 | 0.82 | 2.70 | 3.4 | 0.005 | 0.73 | 0.0 | 0.04 | 27.24 | 0.00 | 2.090 | 11.75 | 2.67 | 5.1 | 94.9 | 0.0 | 1.36 | 1.26 | 0.85 | 0.87 | 2.62 | 16515 | 1334 | 14 | 294 | 0 | 0 | 0 | logfile |
✔ | 8SoY | 40671 | 2023-08-11 | 2023-04-30 | 2.85 | 2.95 | 2.81 | 3.0 | 0.005 | 0.73 | 0.0 | 0.05 | 12.14 | 0.01 | 2.374 | 1.86 | 0.00 | 2.3 | 97.7 | 0.0 | -0.69 | 0.70 | 0.82 | 2.95 | 3.0 | 0.004 | 0.60 | 0.0 | 0.05 | 15.57 | 0.01 | 2.316 | 3.01 | 3.62 | 2.5 | 97.5 | 0.0 | -0.03 | 0.27 | 0.70 | 0.83 | 1.52 | 10074 | 1422 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SoR | 40669 | 2023-08-21 | 2023-04-29 | 3.96 | 3.57 | — | 3.5 | 0.004 | 0.61 | 1.0 | 0.04 | 14.39 | 0.00 | 1.903 | 7.61 | 0.11 | 4.7 | 95.2 | 0.1 | -0.05 | 0.75 | 0.73 | 2.16 | 3.5 | 0.003 | 0.55 | 0.0 | 0.04 | 15.00 | 0.00 | 1.882 | 8.07 | 0.11 | 5.7 | 94.3 | 0.1 | 0.47 | 0.31 | 0.75 | 0.73 | 2.07 | 32094 | 1986 | 4 | 0 | 1 | 0 | 16046 | logfile |
✔ | 8SoK | 40660 | 2023-08-24 | 2023-04-28 | 4.1 | 4.25 | 4.03 | 4.0 | 0.005 | 0.76 | 0.0 | 0.09 | 13.67 | 0.01 | 2.084 | 5.31 | 1.02 | 9.8 | 89.7 | 0.6 | -3.40 | 0.77 | 0.67 | — | 4.0 | 0.003 | 0.62 | 0.0 | 0.09 | 13.62 | 0.00 | 1.923 | 8.62 | 0.00 | 7.2 | 92.7 | 0.1 | -1.48 | 0.65 | 0.75 | 0.61 | — | 37162 | 2335 | 8 | 10 | 2 | 0 | 18588 | logfile |
✔ | 8SoJ | 40659 | 2023-08-22 | 2023-04-28 | 3.8 | 3.95 | 3.72 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 12.26 | 0.01 | 2.280 | 1.74 | 0.52 | 5.0 | 94.7 | 0.2 | -2.25 | 0.78 | 0.77 | 2.05 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 14.01 | 0.00 | 2.018 | 6.41 | 0.10 | 4.2 | 95.8 | 0.0 | -0.89 | 0.81 | 0.78 | 0.76 | 2.00 | 34490 | 2195 | 6 | 0 | 2 | 0 | 17267 | logfile |
✔ | 8Soi | 40658 | 2023-08-16 | 2023-04-28 | 4.2 | 3.78 | — | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 15.47 | 0.00 | 2.090 | 9.52 | 0.09 | 3.2 | 96.7 | 0.1 | 1.61 | 0.66 | 0.64 | — | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 14.25 | 0.00 | 2.009 | 9.08 | 0.00 | 3.7 | 96.1 | 0.2 | 1.92 | 0.53 | 0.66 | 0.63 | — | 20708 | 1276 | 4 | 0 | 0 | 0 | 10465 | logfile |