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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6VDK | 21151 | 2023-08-12 | 2019-12-27 | 4.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12309 | 1274 | 14 | 104 | 6 | 0 | 0 | logfile |
✔ | 7WG7 | 32479 | 2023-08-19 | 2021-12-28 | 4.0 | 4.39 | — | 4.2 | 0.005 | 0.88 | 0.0 | 0.06 | 14.25 | 0.01 | 2.237 | 6.84 | 0.07 | 7.8 | 92.2 | 0.0 | -2.10 | 0.86 | 0.78 | — | 4.2 | 0.002 | 0.64 | 0.0 | 0.05 | 15.70 | 0.00 | 2.121 | 12.40 | 0.14 | 7.6 | 92.4 | 0.0 | -1.24 | 1.13 | 0.87 | 0.78 | — | 27041 | 3313 | 25 | 0 | 73 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-08-09 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CKQ | 30390 | 2023-08-19 | 2020-07-18 | 4.4 | 4.50 | — | 4.4 | 0.003 | 0.69 | 0.0 | 0.05 | 15.78 | 0.01 | 2.153 | 5.20 | 0.30 | 5.6 | 94.4 | 0.0 | -4.73 | 0.76 | 0.63 | — | 4.4 | 0.003 | 0.70 | 0.0 | 0.04 | 15.81 | 0.00 | 1.934 | 16.24 | 0.08 | 6.2 | 93.7 | 0.0 | -1.70 | 0.95 | 0.81 | 0.73 | — | 27484 | 3588 | 14 | 87 | 5 | 0 | 0 | logfile |
✔ | 8A64 | 15205 | 2023-08-10 | 2022-06-16 | 4.6 | 7.63 | 4.66 | 4.6 | 0.008 | 0.86 | 0.0 | 0.06 | 5.84 | 0.01 | 2.112 | 20.40 | 0.00 | 5.8 | 94.2 | 0.0 | -1.55 | 0.91 | 0.78 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 4.67 | 0.00 | 2.031 | 18.34 | 0.00 | 9.2 | 90.8 | 0.0 | -1.08 | 1.83 | 0.91 | 0.78 | — | 6737 | 1354 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 5JUY | 8178 | 2023-08-18 | 2016-05-10 | 4.1 | 4.28 | — | 4.1 | 0.009 | 1.23 | 0.0 | 0.05 | 10.72 | 0.00 | 1.447 | 16.11 | 0.71 | 6.6 | 93.0 | 0.4 | -3.18 | 0.76 | 0.55 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 12.04 | 0.00 | 2.092 | 12.45 | 0.00 | 5.3 | 94.6 | 0.1 | -0.61 | 1.62 | 0.84 | 0.69 | — | 76058 | 9461 | 32 | 0 | 14 | 0 | 0 | logfile |
✘ | 6QEL | 4537 | 2023-08-12 | 2019-01-08 | 3.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64816 | 4092 | 24 | 0 | 24 | 0 | 32302 | logfile |
✔ | 7DTU | 30854 | 2023-08-12 | 2021-01-06 | 4.4 | 4.54 | — | 3.7 | 0.006 | 0.90 | 0.0 | 0.06 | 14.57 | 0.01 | 2.277 | 6.85 | 0.00 | 9.4 | 90.6 | 0.0 | -3.95 | 0.68 | 0.79 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.14 | 0.00 | 2.169 | 11.99 | 0.00 | 6.5 | 93.5 | 0.0 | -0.70 | 1.10 | 0.68 | 0.80 | — | 10846 | 1558 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 7SZ4 | 25560 | 2023-08-26 | 2021-11-25 | 4.8 | 7.97 | 4.67 | 3.9 | 0.003 | 0.79 | 0.0 | 0.05 | 14.41 | 0.01 | 2.097 | 25.58 | 0.02 | 18.8 | 80.5 | 0.7 | -3.20 | 0.89 | 0.78 | — | 3.9 | 0.009 | 0.82 | 0.0 | 0.05 | 14.68 | 0.01 | 1.934 | 31.94 | 0.00 | 20.0 | 79.3 | 0.7 | -3.11 | 0.49 | 0.88 | 0.76 | — | 48242 | 5973 | 12 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZUB | 14971 | 2023-08-19 | 2022-05-12 | 2.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 28082 | 1722 | 7 | 0 | 7 | 0 | 14035 | logfile |
✔ | 7KY9 | 23072 | 2023-08-11 | 2020-12-07 | 4.05 | 4.67 | — | 4.5 | 0.004 | 1.14 | 0.0 | 0.05 | 13.33 | 0.00 | 2.206 | 15.79 | 0.00 | 8.3 | 91.7 | 0.0 | -1.25 | 0.67 | 0.71 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.04 | 13.56 | 0.00 | 2.097 | 20.12 | 0.00 | 9.3 | 90.7 | 0.0 | -1.08 | 0.49 | 0.68 | 0.74 | — | 10354 | 1275 | 7 | 0 | 14 | 0 | 0 | logfile |
✔ | 7DTW | 30856 | 2023-08-11 | 2021-01-06 | 4.5 | 4.74 | — | 3.6 | 0.008 | 1.01 | 0.0 | 0.06 | 13.74 | 0.01 | 2.267 | 9.20 | 0.00 | 10.3 | 89.7 | 0.0 | -4.26 | 0.71 | 0.78 | — | 3.7 | 0.002 | 0.59 | 0.0 | 0.05 | 12.54 | 0.00 | 2.233 | 7.27 | 0.00 | 8.1 | 91.9 | 0.0 | -1.09 | 0.58 | 0.71 | 0.79 | — | 10250 | 1556 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 7EU8 | 31309 | 2023-08-15 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.42 | 0.0 | 0.10 | 7.80 | 0.00 | 2.206 | 3.16 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.002 | 0.62 | 0.0 | 0.06 | 8.46 | 0.00 | 2.129 | 7.57 | 0.00 | 3.8 | 96.0 | 0.2 | 0.14 | 1.37 | 0.79 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8SAX | 40283 | 2023-08-16 | 2023-04-02 | 4.0 | 4.49 | 4.01 | 4.3 | 0.004 | 0.65 | 0.0 | 0.06 | 10.03 | 0.00 | 2.035 | 2.64 | 2.12 | 2.7 | 97.0 | 0.4 | -0.49 | 0.77 | 0.75 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.54 | 0.00 | 2.116 | 7.17 | 0.33 | 4.0 | 95.6 | 0.4 | -0.72 | 2.66 | 0.79 | 0.81 | — | 19860 | 2496 | 24 | 0 | 51 | 0 | 0 | logfile |
✔ | 6Fo0 | 4286 | 2023-08-11 | 2018-02-05 | 4.1 | 4.16 | 2.43 | 4.1 | 0.012 | 0.96 | 0.0 | 0.05 | 8.97 | 0.01 | 2.040 | 5.54 | 0.00 | 10.2 | 89.8 | 0.1 | -4.55 | 0.72 | 0.79 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 12.56 | 0.00 | 1.904 | 10.30 | 0.00 | 5.8 | 94.2 | 0.0 | -1.21 | 2.42 | 0.74 | 0.81 | — | 61356 | 3910 | 24 | 0 | 8 | 0 | 30362 | logfile |
✘ | 6Y5A | 10692 | 2023-08-22 | 2020-02-25 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 32403 | 1940 | 10 | 0 | 5 | 0 | 16272 | logfile |
✔ | 5WEo | 8823 | 2023-08-21 | 2017-07-10 | 4.2 | 4.35 | — | 4.2 | 0.009 | 1.05 | 0.0 | 0.06 | 9.88 | 0.01 | 2.188 | 8.90 | 0.24 | 7.3 | 92.7 | 0.1 | -3.69 | 0.80 | 0.72 | — | 4.2 | 0.003 | 0.62 | 0.0 | 0.04 | 11.58 | 0.00 | 2.070 | 9.25 | 0.00 | 5.8 | 94.2 | 0.0 | -0.10 | 1.02 | 0.87 | 0.84 | — | 31168 | 3954 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7A96 | 11686 | 2023-08-20 | 2020-09-01 | 4.8 | 5.70 | 4.94 | 4.9 | 0.003 | 0.49 | 1.0 | 0.04 | 5.85 | 0.00 | 2.236 | 3.91 | 0.82 | 10.8 | 89.2 | 0.0 | -4.46 | 0.88 | 0.77 | — | 4.9 | 0.002 | 0.63 | 0.0 | 0.04 | 9.04 | 0.00 | 2.114 | 10.16 | 0.00 | 3.3 | 96.6 | 0.0 | -0.85 | 0.87 | 0.89 | 0.82 | — | 29811 | 3783 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PD4 | 13330 | 2023-08-10 | 2021-08-04 | 4.9 | 4.13 | — | 7.8 | 0.005 | 0.87 | 0.0 | 0.05 | 14.59 | 0.00 | 2.035 | 38.59 | 0.00 | 11.7 | 88.3 | 0.0 | -4.80 | 0.73 | 0.72 | — | 7.8 | 0.003 | 0.78 | 0.0 | 0.04 | 13.56 | 0.00 | 2.126 | 18.85 | 0.00 | 5.8 | 94.2 | 0.0 | -0.39 | 1.28 | 0.73 | 0.73 | — | 6676 | 842 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V27 | 31638 | 2023-08-09 | 2021-08-07 | 4.18 | 4.43 | — | 4.2 | 0.002 | 0.54 | 0.0 | 0.04 | 11.66 | 0.00 | 2.229 | 9.54 | 0.00 | 9.2 | 90.8 | 0.0 | -4.40 | 0.85 | 0.80 | — | 4.2 | 0.004 | 0.76 | 0.0 | 0.05 | 12.07 | 0.01 | 2.188 | 19.72 | 0.28 | 11.6 | 88.4 | 0.0 | -2.83 | 0.81 | 0.86 | 0.82 | — | 3252 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |