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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6WUA | 21908 | 2023-11-16 | 2020-05-04 | 3.2 | 2.89 | — | 2.7 | 0.007 | 0.81 | 0.0 | 0.05 | 16.54 | 0.01 | 1.992 | 9.24 | 14.80 | 15.4 | 84.5 | 0.1 | -4.41 | 0.72 | 0.80 | 2.77 | 2.7 | 0.005 | 0.72 | 0.0 | 0.04 | 16.13 | 0.01 | 1.980 | 8.75 | 0.43 | 12.5 | 87.5 | 0.0 | -1.48 | 1.66 | 0.75 | 0.84 | 2.16 | 15195 | 833 | 9 | 402 | 1 | 0 | 0 | logfile |
✔ | 8ESR | 24422 | 2023-11-15 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.69 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.005 | 0.59 | 0.0 | 0.04 | 15.78 | 0.00 | 2.094 | 10.59 | 0.34 | 4.2 | 95.8 | 0.1 | 0.99 | 1.11 | 0.78 | 0.77 | 2.13 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |
✔ | 7UDT | 26459 | 2023-11-16 | 2022-03-20 | 3.17 | 3.35 | 3.18 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.89 | 0.00 | 2.197 | 7.48 | 0.24 | 3.3 | 96.7 | 0.0 | 0.38 | 0.55 | 0.69 | 1.91 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.68 | 0.00 | 2.039 | 8.65 | 0.35 | 3.2 | 96.8 | 0.0 | 0.62 | 0.75 | 0.63 | 0.80 | 1.67 | 15806 | 1966 | 8 | 0 | 6 | 0 | 0 | logfile |
✘ | 7AMY | 11827 | 2023-11-19 | 2020-10-09 | 3.75 | 3.87 | 3.71 | 3.8 | 0.010 | 0.89 | 0.0 | 0.05 | 14.93 | 0.00 | 2.177 | 20.18 | 0.66 | 13.8 | 85.9 | 0.3 | -5.40 | 0.82 | 0.86 | 1.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24849 | 3177 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UDU | 26460 | 2023-11-16 | 2022-03-20 | 4.15 | 4.18 | 4.07 | 4.1 | 0.004 | 0.67 | 0.0 | 0.05 | 14.26 | 0.00 | 2.186 | 10.92 | 0.06 | 6.0 | 94.0 | 0.0 | -0.29 | 0.55 | 0.65 | — | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.65 | 0.00 | 1.892 | 13.07 | 0.18 | 5.3 | 94.7 | 0.0 | -0.38 | 1.44 | 0.65 | 0.80 | — | 15711 | 1966 | 9 | 0 | 8 | 0 | 0 | logfile |
✘ | 7M6F | 23694 | 2023-11-18 | 2021-03-25 | 3.9 | 4.35 | — | 4.1 | 0.006 | 1.00 | 4.0 | 0.07 | 10.47 | 0.01 | 1.869 | 10.66 | 0.00 | 3.9 | 96.1 | 0.0 | 0.42 | 0.78 | 0.76 | 2.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24304 | 3446 | 25 | 0 | 63 | 0 | 0 | logfile |
✔ | 6QX9 | 4665 | 2023-11-20 | 2019-03-07 | 3.28 | 3.33 | — | 3.3 | 0.011 | 1.31 | 35.0 | 0.08 | 16.06 | 0.01 | 0.530 | 12.89 | 2.29 | 5.5 | 94.1 | 0.3 | -3.26 | 0.46 | 0.51 | 1.65 | 3.3 | 0.004 | 0.69 | 0.0 | 0.04 | 16.70 | 0.00 | 1.873 | 15.06 | 0.35 | 4.8 | 95.1 | 0.1 | -0.28 | 0.86 | 0.50 | 0.60 | 1.59 | 137494 | 15560 | 77 | 565 | 36 | 0 | 0 | logfile |
✔ | 7YQ4 | 34019 | 2023-11-15 | 2022-08-05 | 3.95 | 4.36 | 4.08 | 4.3 | 0.016 | 1.30 | 0.0 | 0.07 | 18.74 | 0.02 | 2.256 | 4.50 | 0.53 | 9.0 | 91.0 | 0.0 | -4.40 | 0.72 | 0.74 | 1.65 | 4.3 | 0.003 | 0.94 | 0.0 | 0.05 | 19.66 | 0.01 | 2.142 | 10.60 | 0.62 | 7.1 | 92.9 | 0.0 | -2.81 | 1.12 | 0.73 | 0.79 | 1.55 | 10618 | 1243 | 5 | 24 | 0 | 0 | 0 | logfile |
✔ | 7ZDT | 14669 | 2023-11-14 | 2022-03-29 | 2.71 | 2.89 | 2.68 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 13.49 | 0.00 | 1.945 | 6.38 | 0.00 | 1.3 | 98.7 | 0.0 | -0.81 | 0.76 | 0.90 | 3.85 | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 15.76 | 0.00 | 1.944 | 5.22 | 1.28 | 1.7 | 98.3 | 0.0 | 2.14 | 0.34 | 0.74 | 0.91 | 3.63 | 9003 | 1155 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XG0 | 33181 | 2023-11-17 | 2022-04-02 | 2.6 | 2.53 | 2.55 | 2.7 | 0.007 | 0.98 | 0.0 | 0.06 | 19.59 | 0.01 | 1.817 | 12.89 | 2.76 | 3.9 | 96.1 | 0.0 | -2.06 | 0.76 | 0.82 | 2.99 | 2.7 | 0.003 | 0.63 | 0.0 | 0.04 | 19.20 | 0.00 | 2.054 | 13.59 | 3.09 | 3.5 | 96.5 | 0.0 | -0.14 | 1.17 | 0.75 | 0.85 | 3.01 | 19893 | 2280 | 12 | 118 | 1 | 0 | 0 | logfile |
✔ | 7TZ5 | 26202 | 2023-11-16 | 2022-02-15 | 3.41 | 3.66 | — | 3.6 | 0.009 | 1.18 | 9.0 | 0.07 | 13.20 | 0.00 | 2.067 | 15.18 | 0.30 | 10.6 | 89.0 | 0.4 | -2.38 | 0.70 | 0.83 | 3.89 | 3.6 | 0.006 | 0.73 | 0.0 | 0.05 | 15.03 | 0.00 | 2.156 | 10.83 | 0.79 | 10.4 | 89.6 | 0.0 | -1.61 | 0.46 | 0.67 | 0.82 | 3.70 | 16023 | 2142 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EGB | 31111 | 2023-11-14 | 2021-03-24 | 3.3 | 3.51 | — | 34.0 | 0.008 | 1.11 | 62.0 | 0.07 | 15.43 | 0.01 | 1.322 | 21.13 | 3.22 | 7.3 | 91.9 | 0.8 | -3.64 | 0.32 | 0.02 | 0.13 | 3.0 | 0.006 | 0.97 | 0.0 | 0.05 | 16.75 | 0.01 | 1.840 | 21.35 | 0.38 | 8.6 | 91.2 | 0.2 | -1.17 | 1.17 | 0.43 | 0.22 | 0.25 | 113098 | 13887 | 63 | 138 | 18 | 0 | 0 | logfile |
✔ | 7SBB | 24976 | 2023-11-20 | 2021-09-24 | 3.1 | 2.42 | — | 2.1 | 0.013 | 2.09 | 97.0 | 0.14 | 17.08 | 0.02 | 2.030 | 4.28 | 3.53 | 4.6 | 95.2 | 0.1 | -2.12 | 0.75 | 0.77 | 3.72 | 2.9 | 0.004 | 0.78 | 0.0 | 0.04 | 18.54 | 0.00 | 2.071 | 12.48 | 0.71 | 3.4 | 96.6 | 0.0 | 0.06 | 0.74 | 0.77 | 0.81 | 2.62 | 28938 | 3435 | 13 | 76 | 0 | 0 | 0 | logfile |
✔ | 8EUP | 24410 | 2023-11-19 | 2022-10-19 | 3.1 | 3.34 | — | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 17.14 | 0.00 | 2.108 | 12.23 | 0.40 | 5.3 | 94.6 | 0.1 | -0.11 | 0.72 | 0.69 | 1.81 | 3.2 | 0.002 | 0.55 | 0.0 | 0.03 | 17.04 | 0.00 | 1.998 | 13.54 | 0.32 | 4.2 | 95.7 | 0.1 | 0.46 | 0.40 | 0.74 | 0.72 | 1.63 | 78722 | 6156 | 41 | 1623 | 1 | 0 | 0 | logfile |
✔ | 8DG7 | 27417 | 2023-11-16 | 2022-06-23 | 3.32 | 3.61 | 3.39 | 3.5 | 0.007 | 1.11 | 1.0 | 0.06 | 17.48 | 0.01 | 1.980 | 8.83 | 1.24 | 8.7 | 91.2 | 0.1 | -2.75 | 0.70 | 0.70 | 0.47 | 3.5 | 0.003 | 0.68 | 0.0 | 0.04 | 17.33 | 0.00 | 1.901 | 15.83 | 0.37 | 7.8 | 92.1 | 0.2 | -0.81 | 0.94 | 0.71 | 0.71 | 0.52 | 15609 | 1816 | 7 | 47 | 9 | 0 | 0 | logfile |
✔ | 8D48 | 27177 | 2023-11-13 | 2022-06-01 | 3.7 | 3.91 | 3.59 | 3.9 | 0.005 | 0.81 | 1.0 | 0.05 | 15.51 | 0.01 | 1.565 | 11.86 | 0.00 | 7.2 | 92.8 | 0.0 | -1.11 | 0.72 | 0.79 | 2.07 | 3.9 | 0.003 | 0.69 | 0.0 | 0.05 | 15.92 | 0.00 | 2.223 | 8.73 | 0.16 | 5.9 | 94.1 | 0.0 | -0.65 | 0.98 | 0.72 | 0.80 | 1.97 | 5545 | 714 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6ZFP | 11185 | 2023-11-20 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.71 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.64 | 0.00 | 2.202 | 7.49 | 0.22 | 5.8 | 94.1 | 0.1 | 0.31 | 0.76 | 0.80 | 0.77 | 1.22 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 7T3A | 25652 | 2023-11-18 | 2021-12-07 | 4.0 | 4.44 | — | 4.2 | 0.006 | 1.20 | 1.0 | 0.07 | 15.37 | 0.01 | 2.234 | 7.29 | 0.04 | 9.3 | 90.7 | 0.0 | -3.22 | 0.81 | 0.81 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 16.76 | 0.00 | 2.134 | 16.10 | 0.23 | 7.8 | 92.2 | 0.0 | -1.31 | 0.81 | 0.81 | 0.81 | — | 23310 | 2897 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KC0 | 22803 | 2023-11-17 | 2020-10-04 | 3.2 | 3.58 | — | 3.3 | 0.005 | 0.66 | 0.0 | 0.05 | 15.94 | 0.00 | 2.210 | 11.20 | 2.90 | 6.0 | 94.0 | 0.0 | -3.23 | 0.84 | 0.79 | 1.65 | 3.3 | 0.006 | 0.69 | 0.0 | 0.05 | 17.25 | 0.00 | 1.931 | 14.48 | 0.48 | 7.3 | 92.7 | 0.0 | -1.33 | 0.53 | 0.85 | 0.82 | 1.79 | 19553 | 2334 | 10 | 47 | 4 | 0 | 0 | logfile |
✔ | 8HSJ | 34999 | 2023-11-17 | 2022-12-19 | 3.6 | 4.38 | 3.44 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 14.73 | 0.01 | 1.788 | 16.52 | 4.93 | 3.7 | 96.0 | 0.3 | -0.81 | 0.82 | 0.68 | 0.35 | 3.9 | 0.004 | 0.81 | 0.0 | 0.04 | 16.44 | 0.01 | 1.074 | 23.89 | 0.99 | 3.5 | 96.2 | 0.3 | -0.24 | 1.32 | 0.85 | 0.73 | 0.36 | 17244 | 2166 | 12 | 0 | 18 | 0 | 0 | logfile |