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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DTK | 27703 | 2023-12-08 | 2022-07-25 | 3.77 | 3.96 | 3.71 | 4.0 | 0.005 | 0.79 | 0.0 | 0.09 | 16.06 | 0.01 | 2.096 | 4.32 | 0.00 | 4.5 | 95.5 | 0.0 | -2.29 | 0.63 | 0.71 | 2.78 | 4.0 | 0.003 | 0.63 | 0.0 | 0.09 | 15.86 | 0.00 | 1.978 | 11.24 | 0.26 | 7.2 | 92.8 | 0.0 | -2.19 | 0.54 | 0.64 | 0.73 | 2.71 | 6914 | 449 | 4 | 0 | 2 | 0 | 3363 | logfile |
✔ | 8JCY | 36169 | 2023-12-09 | 2023-05-12 | 2.9 | 3.07 | 2.88 | 3.1 | 0.003 | 0.53 | 0.0 | 0.17 | 12.99 | 0.00 | 2.200 | 6.04 | 0.00 | 4.2 | 95.8 | 0.0 | 0.76 | 0.64 | 0.71 | 2.52 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 13.60 | 0.00 | 2.142 | 6.19 | 1.96 | 4.8 | 95.2 | 0.0 | 0.09 | 0.42 | 0.68 | 0.78 | 2.45 | 10874 | 1525 | 4 | 0 | 11 | 0 | 0 | logfile |
✔ | 8JKB | 36367 | 2023-12-11 | 2023-06-01 | 3.27 | 4.57 | 3.29 | 3.9 | 0.004 | 0.67 | 0.0 | 0.05 | 13.37 | 0.00 | 2.142 | 8.50 | 0.16 | 4.0 | 96.0 | 0.0 | -1.95 | 0.84 | 0.71 | 2.10 | 4.0 | 0.004 | 0.81 | 0.0 | 0.04 | 15.44 | 0.00 | 2.132 | 14.34 | 0.37 | 3.9 | 96.1 | 0.0 | -1.64 | 0.93 | 0.90 | 0.85 | 2.01 | 17169 | 2220 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 8i5Y | 35198 | 2023-12-10 | 2023-01-26 | 2.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13617 | 1565 | 9 | 0 | 39 | 6 | 0 | logfile |
✔ | 8JAN | 36130 | 2023-12-13 | 2023-05-06 | 3.3 | 3.48 | 3.09 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 12.83 | 0.00 | 2.199 | 4.25 | 0.00 | 4.2 | 95.8 | 0.0 | -0.26 | 0.72 | 0.89 | 3.06 | 3.4 | 0.004 | 0.54 | 0.0 | 0.04 | 14.21 | 0.00 | 2.170 | 4.42 | 0.12 | 4.8 | 95.2 | 0.0 | -0.47 | 0.21 | 0.73 | 0.91 | 2.83 | 75114 | 9834 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Soi | 40658 | 2023-12-12 | 2023-04-28 | 4.2 | 3.78 | — | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 15.47 | 0.00 | 2.090 | 9.52 | 0.09 | 3.2 | 96.7 | 0.1 | 1.61 | 0.66 | 0.64 | — | 3.6 | 0.004 | 0.56 | 0.0 | 0.04 | 14.28 | 0.00 | 2.032 | 9.47 | 0.09 | 3.9 | 96.0 | 0.2 | 1.86 | 0.54 | 0.66 | 0.63 | — | 20708 | 1276 | 4 | 0 | 0 | 0 | 10465 | logfile |
✔ | 8oUY | 17205 | 2023-12-10 | 2023-04-25 | 3.4 | 2.97 | 3.46 | 3.3 | 0.002 | 0.52 | 0.0 | 0.04 | 17.65 | 0.00 | 1.811 | 4.62 | 0.00 | 4.5 | 95.5 | 0.0 | -0.78 | 0.71 | 0.78 | 2.26 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 17.39 | 0.00 | 1.755 | 5.10 | 0.25 | 5.8 | 94.2 | 0.0 | -0.32 | 0.35 | 0.71 | 0.78 | 2.31 | 14695 | 925 | 7 | 0 | 6 | 0 | 7380 | logfile |
✘ | 7YVL | 34131 | 2023-12-07 | 2022-08-19 | 3.3 | 3.44 | 3.21 | 3.4 | 0.011 | 1.16 | 5.0 | 0.07 | 12.98 | 0.01 | 2.155 | 18.66 | 1.42 | 9.0 | 90.6 | 0.5 | -4.93 | 0.57 | 0.77 | 1.24 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3224 | 419 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y68 | 33637 | 2023-12-09 | 2022-06-18 | 2.87 | 3.37 | 3.03 | 3.3 | 0.005 | 0.70 | 0.0 | 0.05 | 22.41 | 0.01 | 2.213 | 11.36 | 0.09 | 5.3 | 94.7 | 0.0 | -1.61 | 0.68 | 0.82 | 3.50 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 15.98 | 0.00 | 2.159 | 9.47 | 1.14 | 4.8 | 95.2 | 0.0 | 0.12 | 1.60 | 0.62 | 0.78 | 2.97 | 10264 | 1300 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 8EPQ | 28533 | 2023-12-13 | 2022-10-06 | 3.3 | 3.96 | 3.41 | 3.0 | 0.004 | 0.68 | 0.0 | 0.05 | 13.11 | 0.00 | 2.117 | 7.20 | 0.12 | 3.2 | 96.8 | 0.0 | 0.04 | 0.85 | 0.83 | 2.38 | 3.0 | 0.006 | 0.68 | 0.0 | 0.05 | 13.61 | 0.00 | 2.119 | 9.87 | 0.15 | 5.2 | 94.8 | 0.0 | 0.04 | 2.04 | 0.86 | 0.84 | 2.21 | 24287 | 2984 | 21 | 0 | 66 | 0 | 0 | logfile |
✘ | 8DFC | 27404 | 2023-12-12 | 2022-06-21 | 2.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20713 | 2548 | 18 | 0 | 15 | 483 | 0 | logfile |
✔ | 7YVi | 34128 | 2023-12-14 | 2022-08-19 | 3.7 | 4.10 | 3.74 | 4.0 | 0.026 | 1.68 | 2.0 | 0.10 | 13.43 | 0.01 | 2.028 | 19.40 | 1.33 | 5.3 | 94.1 | 0.6 | -2.56 | 0.74 | 0.82 | 2.51 | 4.0 | 0.004 | 0.68 | 0.0 | 0.04 | 14.45 | 0.00 | 2.121 | 8.02 | 0.20 | 5.5 | 94.4 | 0.1 | -0.31 | 0.55 | 0.76 | 0.84 | 1.90 | 28961 | 3777 | 12 | 0 | 37 | 0 | 0 | logfile |
✔ | 8GTQ | 34263 | 2023-12-15 | 2022-09-08 | 3.1 | 3.59 | 3.36 | 3.5 | 0.009 | 1.05 | 5.0 | 0.08 | 13.56 | 0.01 | 1.900 | 14.36 | 3.06 | 7.3 | 90.8 | 1.9 | -3.05 | 0.70 | 0.69 | 1.82 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 14.84 | 0.00 | 2.115 | 8.12 | 0.25 | 5.8 | 94.0 | 0.1 | -0.81 | 0.90 | 0.69 | 0.75 | 2.30 | 30519 | 3759 | 33 | 0 | 75 | 0 | 0 | logfile |
✔ | 8J1A | 35915 | 2023-12-08 | 2023-04-12 | 3.24 | 3.58 | 3.34 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.32 | 0.00 | 1.976 | 5.61 | 0.63 | 3.8 | 96.2 | 0.0 | 0.36 | 0.61 | 0.82 | 2.87 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 15.71 | 0.00 | 2.064 | 6.35 | 0.10 | 3.6 | 96.4 | 0.0 | 0.51 | 0.39 | 0.57 | 0.82 | 2.94 | 8845 | 1137 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EPP | 28532 | 2023-12-13 | 2022-10-06 | 3.1 | 3.64 | 3.26 | 2.9 | 0.004 | 0.59 | 0.0 | 0.05 | 14.62 | 0.00 | 2.217 | 7.58 | 0.35 | 3.6 | 96.2 | 0.1 | 0.11 | 0.84 | 0.84 | 2.03 | 2.9 | 0.003 | 0.58 | 0.0 | 0.05 | 14.84 | 0.00 | 2.141 | 8.68 | 0.23 | 4.9 | 95.1 | 0.1 | 0.03 | 0.39 | 0.84 | 0.84 | 1.97 | 23913 | 2939 | 21 | 0 | 66 | 0 | 0 | logfile |
✔ | 8oi8 | 16888 | 2023-12-10 | 2023-03-22 | 2.28 | 2.38 | 2.21 | 2.3 | 0.004 | 0.58 | 0.0 | 0.04 | 12.07 | 0.00 | 1.798 | 3.42 | 0.65 | 1.4 | 98.6 | 0.0 | -1.50 | 0.72 | 0.87 | 5.56 | 2.3 | 0.005 | 0.66 | 0.0 | 0.05 | 15.05 | 0.00 | 1.739 | 4.06 | 1.05 | 0.7 | 99.3 | 0.0 | 1.29 | 2.13 | 0.74 | 0.91 | 5.56 | 14895 | 1815 | 15 | 0 | 10 | 585 | 0 | logfile |
✔ | 8BoN | 16144 | 2023-12-13 | 2022-11-15 | 3.2 | 3.14 | 3.12 | 3.1 | 0.012 | 0.57 | 0.0 | 0.04 | 13.29 | 0.00 | 2.145 | 5.32 | 0.00 | 3.0 | 97.0 | 0.0 | 0.15 | 0.76 | 0.79 | 2.78 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 13.70 | 0.00 | 2.205 | 6.00 | 0.07 | 3.1 | 96.9 | 0.0 | 0.38 | 0.26 | 0.76 | 0.78 | 2.41 | 25930 | 3246 | 22 | 0 | 52 | 0 | 0 | logfile |
✘ | 8FCL | 28982 | 2023-12-16 | 2022-12-01 | 3.51 | 3.89 | 3.72 | 3.9 | 0.011 | 0.87 | 0.0 | 0.06 | 12.28 | 0.00 | 2.300 | 0.67 | 0.10 | 1.8 | 98.2 | 0.0 | 0.35 | 0.67 | 0.63 | 1.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36904 | 4667 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 8UXG | 42763 | 2023-12-15 | 2023-11-09 | 3.08 | 3.56 | — | 2.1 | 0.003 | 0.74 | 0.0 | 0.04 | 15.50 | 0.01 | 2.011 | 10.23 | 1.27 | 2.3 | 97.7 | 0.0 | 1.03 | 0.84 | 0.82 | 2.79 | 1.9 | 0.005 | 0.65 | 0.0 | 0.04 | 15.57 | 0.00 | 2.149 | 9.04 | 0.06 | 2.9 | 97.1 | 0.0 | 1.44 | 0.40 | 0.86 | 0.87 | 3.04 | 138712 | 17324 | 12 | 0 | 16 | 0 | 0 | logfile |
✔ | 8JCW | 36167 | 2023-12-09 | 2023-05-12 | 3.0 | 3.17 | 2.95 | 3.1 | 0.003 | 0.61 | 0.0 | 0.17 | 13.68 | 0.00 | 2.218 | 5.90 | 0.22 | 5.5 | 94.5 | 0.0 | 0.47 | 0.69 | 0.77 | 1.98 | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.27 | 0.00 | 2.160 | 7.29 | 3.59 | 6.2 | 93.8 | 0.0 | 0.09 | 1.15 | 0.71 | 0.83 | 2.47 | 10760 | 1527 | 4 | 0 | 6 | 0 | 0 | logfile |