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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7WFG | 32465 | 2023-12-09 | 2021-12-26 | 4.33 | 4.89 | — | 4.3 | 0.006 | 1.01 | 1.0 | 0.06 | 11.46 | 0.01 | 2.204 | 8.95 | 1.08 | 12.3 | 87.5 | 0.2 | -5.06 | 0.68 | 0.68 | — | 4.3 | 0.003 | 0.79 | 0.0 | 0.05 | 12.88 | 0.00 | 2.119 | 21.43 | 0.36 | 11.3 | 88.6 | 0.1 | -2.50 | 1.58 | 0.71 | 0.75 | — | 9836 | 1246 | 11 | 0 | 125 | 0 | 0 | logfile |
✔ | 7T3N | 25665 | 2023-12-07 | 2021-12-08 | 3.0 | 3.31 | — | 3.3 | 0.009 | 0.73 | 0.0 | 0.05 | 16.81 | 0.01 | 2.131 | 5.13 | 0.00 | 4.7 | 95.3 | 0.0 | -3.24 | 0.51 | 0.85 | 3.81 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 15.49 | 0.01 | 2.284 | 7.33 | 1.16 | 2.9 | 97.1 | 0.0 | 0.04 | 0.39 | 0.49 | 0.84 | 2.69 | 3512 | 452 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WFF | 32464 | 2023-12-15 | 2021-12-26 | 3.59 | 3.67 | — | 3.6 | 0.006 | 0.94 | 1.0 | 0.08 | 14.28 | 0.01 | 2.203 | 4.83 | 0.26 | 9.0 | 90.9 | 0.1 | -4.02 | 0.60 | 0.79 | 2.16 | 3.6 | 0.003 | 0.75 | 0.0 | 0.05 | 16.41 | 0.00 | 2.141 | 17.15 | 0.72 | 8.0 | 92.0 | 0.0 | -1.27 | 1.22 | 0.60 | 0.79 | 1.41 | 32124 | 4065 | 20 | 0 | 4 | 0 | 0 | logfile |
✔ | 7CAK | 30333 | 2023-12-15 | 2020-06-08 | 3.58 | 3.74 | — | 3.5 | 0.027 | 1.67 | 3.0 | 0.09 | 12.23 | 0.01 | 1.082 | 48.79 | 1.80 | 9.4 | 89.8 | 0.8 | -4.79 | 0.72 | 0.69 | 2.67 | 3.5 | 0.004 | 0.71 | 0.0 | 0.05 | 13.04 | 0.00 | 2.026 | 13.29 | 0.15 | 6.1 | 93.7 | 0.1 | -1.32 | 1.24 | 0.78 | 0.78 | 2.09 | 30263 | 3771 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 7KFT | 22855 | 2023-12-09 | 2020-10-14 | 3.4 | 3.68 | — | 3.6 | 0.005 | 0.83 | 0.0 | 0.05 | 14.40 | 0.01 | 2.237 | 5.46 | 0.00 | 4.8 | 95.2 | 0.0 | -0.99 | 0.69 | 0.79 | 2.73 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 16.08 | 0.00 | 2.148 | 7.42 | 0.24 | 4.8 | 95.2 | 0.0 | 0.49 | 0.40 | 0.69 | 0.80 | 2.11 | 11680 | 1427 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q9K | 13872 | 2023-12-14 | 2021-11-12 | 4.5 | 7.17 | — | 4.5 | 0.005 | 0.88 | 1.0 | 0.05 | 11.19 | 0.01 | 1.447 | 5.50 | 0.44 | 3.7 | 95.9 | 0.4 | 0.13 | 0.82 | 0.65 | — | 4.5 | 0.004 | 0.75 | 0.0 | 0.05 | 11.91 | 0.00 | 2.072 | 26.32 | 0.00 | 5.9 | 94.1 | 0.0 | -0.91 | 1.42 | 0.85 | 0.74 | — | 27225 | 3388 | 25 | 0 | 60 | 0 | 0 | logfile |
✘ | 6PLT | 20375 | 2023-12-10 | 2019-07-01 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14445 | 1725 | 15 | 0 | 60 | 0 | 0 | logfile |
✘ | 6BK8 | 7109 | 2023-12-14 | 2017-11-07 | 3.3 | 3.39 | — | 3.3 | 0.009 | 1.23 | 7.0 | 0.10 | 15.23 | 0.01 | 1.020 | 4.68 | 1.27 | 6.3 | 93.2 | 0.5 | -3.63 | 0.65 | 0.75 | 3.14 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 82745 | 9975 | 53 | 433 | 249 | 0 | 0 | logfile |
✘ | 7L20 | 23121 | 2023-12-08 | 2020-12-15 | 3.15 | 3.39 | — | 3.4 | 0.007 | 0.87 | 0.0 | 0.05 | 19.41 | 0.01 | 0.505 | 10.97 | 0.84 | 7.3 | 92.2 | 0.5 | -3.38 | 0.69 | 0.79 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110234 | 9454 | 67 | 1583 | 171 | 0 | 0 | logfile |
✔ | 8C90 | 16497 | 2023-12-09 | 2023-01-21 | 3.15 | 3.51 | 3.31 | 3.1 | 0.002 | 0.38 | 0.0 | 0.03 | 21.87 | 0.00 | 1.866 | 5.45 | 0.00 | 5.1 | 94.8 | 0.0 | 0.48 | 0.79 | 0.79 | 1.77 | 3.2 | 0.005 | 0.63 | 0.0 | 0.04 | 22.31 | 0.00 | 2.032 | 13.25 | 0.45 | 7.5 | 92.5 | 0.0 | -1.01 | 0.52 | 0.81 | 0.85 | 1.91 | 64726 | 2183 | 22 | 2219 | 0 | 0 | 0 | logfile |
✘ | 5TAT | 8384 | 2023-12-10 | 2016-09-10 | 4.8 | 5.01 | 5.79 | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 9.86 | 0.01 | 1.373 | 4.75 | 0.35 | 9.4 | 90.5 | 0.1 | -4.89 | 0.78 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✔ | 5TAZ | 8390 | 2023-12-10 | 2016-09-10 | 4.3 | 4.46 | 4.86 | 4.3 | 0.004 | 0.86 | 4.0 | 0.05 | 9.92 | 0.01 | 1.373 | 4.79 | 0.58 | 10.2 | 89.6 | 0.2 | -5.04 | 0.74 | 0.73 | — | 4.3 | 0.005 | 0.81 | 0.0 | 0.04 | 12.08 | 0.00 | 2.051 | 18.58 | 0.00 | 12.9 | 86.9 | 0.2 | -2.20 | 0.91 | 0.76 | 0.77 | — | 121276 | 13500 | 12 | 0 | 3712 | 0 | 0 | logfile |
✔ | 7T8B | 25743 | 2023-12-15 | 2021-12-16 | 3.8 | 2.77 | 3.90 | 2.3 | 0.002 | 0.47 | 0.0 | 0.04 | 8.77 | 0.00 | 2.205 | 7.91 | 1.40 | 4.3 | 95.6 | 0.2 | -0.32 | 0.73 | 0.72 | 2.28 | 2.3 | 0.004 | 0.79 | 0.0 | 0.04 | 15.34 | 0.00 | 2.042 | 17.37 | 0.48 | 5.2 | 94.8 | 0.0 | -0.13 | 0.84 | 0.73 | 0.73 | 1.33 | 33025 | 4131 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 6Jii | 9834 | 2023-12-09 | 2019-02-21 | 4.2 | 4.38 | — | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 11.51 | 0.01 | 2.208 | 7.63 | 0.57 | 11.2 | 88.4 | 0.4 | -4.07 | 0.78 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 115028 | 15012 | 16 | 0 | 16 | 0 | 0 | logfile |
✘ | 7CWL | 30482 | 2023-12-15 | 2020-08-29 | 3.8 | 4.03 | — | 3.8 | 0.009 | 1.09 | 4.0 | 0.07 | 10.15 | 0.01 | 1.462 | 24.00 | 1.07 | 7.6 | 92.0 | 0.4 | -3.59 | 0.71 | 0.63 | 1.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30638 | 3900 | 12 | 0 | 27 | 0 | 0 | logfile |
✔ | 7SYT | 25540 | 2023-12-14 | 2021-11-25 | 4.4 | 3.44 | 4.34 | 3.4 | 0.004 | 0.85 | 0.0 | 0.04 | 21.34 | 0.01 | 2.271 | 4.86 | 0.07 | 5.0 | 95.0 | 0.0 | -2.59 | 0.59 | 0.63 | — | 3.4 | 0.005 | 0.78 | 0.0 | 0.04 | 21.52 | 0.01 | 1.971 | 17.61 | 0.02 | 7.5 | 92.5 | 0.0 | -1.50 | 1.13 | 0.60 | 0.66 | — | 80962 | 4896 | 38 | 1960 | 1 | 0 | 0 | logfile |
✘ | 7CWM | 30483 | 2023-12-15 | 2020-08-29 | 3.6 | 4.19 | — | 3.6 | 0.008 | 1.06 | 2.0 | 0.07 | 10.26 | 0.01 | 1.512 | 22.14 | 0.54 | 7.7 | 92.3 | 0.1 | -3.56 | 0.73 | 0.65 | 1.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30772 | 3883 | 26 | 0 | 44 | 0 | 0 | logfile |
✘ | 5GM6 | 9524 | 2023-12-08 | 2016-07-12 | 3.5 | 3.61 | — | 3.6 | 0.012 | 1.33 | 11.0 | 0.08 | 14.71 | 0.01 | 1.303 | 18.95 | 3.36 | 6.6 | 92.1 | 1.2 | -3.54 | 0.58 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112064 | 12796 | 55 | 361 | 881 | 0 | 0 | logfile |
✔ | 8FN1 | 29303 | 2023-12-08 | 2022-12-26 | 2.88 | 2.15 | 2.86 | 1.9 | 0.004 | 0.59 | 0.0 | 0.06 | 9.15 | 0.00 | 2.173 | 7.25 | 0.23 | 2.5 | 97.5 | 0.0 | 1.17 | 0.78 | 0.79 | 4.36 | 1.9 | 0.003 | 0.55 | 0.0 | 0.04 | 13.02 | 0.00 | 2.229 | 6.89 | 2.04 | 3.0 | 97.0 | 0.0 | 1.47 | 0.47 | 0.78 | 0.80 | 3.87 | 8444 | 1116 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QWS | 14193 | 2023-12-14 | 2022-01-25 | 3.4 | 3.09 | — | 7.2 | 0.002 | 0.46 | 0.0 | 0.03 | 22.22 | 0.00 | 2.011 | 9.44 | 1.65 | 3.7 | 96.3 | 0.0 | 0.47 | 0.23 | 0.02 | -0.02 | 3.0 | 0.007 | 1.15 | 1.0 | 0.05 | 24.55 | 0.01 | 0.916 | 32.95 | 1.37 | 11.7 | 88.2 | 0.1 | -3.12 | 2.33 | 0.55 | 0.65 | 0.69 | 137913 | 7047 | 55 | 3769 | 126 | 0 | 0 | logfile |