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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VUH | 32128 | 2023-12-08 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.68 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.9 | 0.004 | 0.65 | 0.0 | 0.04 | 15.92 | 0.00 | 2.061 | 14.58 | 0.22 | 6.0 | 94.0 | 0.0 | -1.32 | 0.37 | 0.72 | 0.73 | 2.34 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7S8N | 24898 | 2023-12-08 | 2021-09-18 | 2.9 | 2.20 | 2.92 | 2.1 | 0.012 | 0.90 | 0.0 | 0.06 | 13.07 | 0.01 | 2.202 | 4.10 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 0.79 | 0.80 | 3.96 | 2.0 | 0.002 | 0.55 | 0.0 | 0.04 | 15.70 | 0.00 | 2.221 | 3.59 | 0.98 | 2.1 | 97.9 | 0.0 | 0.87 | 1.01 | 0.82 | 0.82 | 2.80 | 8154 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8EL8 | 28224 | 2023-12-07 | 2022-09-23 | 3.2 | 3.53 | 3.33 | 3.5 | 0.007 | 0.70 | 0.0 | 0.04 | 13.20 | 0.00 | 2.403 | 2.38 | 0.00 | 1.7 | 98.3 | 0.0 | 0.75 | 0.66 | 0.85 | 2.31 | 3.5 | 0.003 | 0.45 | 0.0 | 0.04 | 15.16 | 0.00 | 2.353 | 2.27 | 0.00 | 2.4 | 97.6 | 0.0 | 1.11 | 0.26 | 0.67 | 0.85 | 2.07 | 4467 | 597 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UM5 | 26597 | 2023-12-08 | 2022-04-06 | 2.73 | 2.12 | 2.75 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 11.84 | 0.00 | 2.281 | 2.29 | 0.00 | 3.8 | 96.2 | 0.0 | -0.74 | 0.82 | 0.82 | 4.55 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.14 | 0.00 | 2.252 | 3.96 | 1.06 | 4.1 | 95.9 | 0.0 | 0.30 | 0.34 | 0.83 | 0.83 | 3.86 | 8277 | 1104 | 6 | 0 | 1 | 1 | 0 | logfile |
✔ | 8EL7 | 28223 | 2023-12-07 | 2022-09-23 | 2.8 | 3.11 | 2.95 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 13.13 | 0.00 | 2.295 | 2.43 | 0.00 | 1.7 | 98.3 | 0.0 | 0.97 | 0.57 | 0.80 | 2.31 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 14.99 | 0.00 | 2.314 | 1.88 | 1.74 | 2.2 | 97.8 | 0.0 | 0.68 | 0.27 | 0.58 | 0.81 | 2.13 | 4562 | 604 | 2 | 0 | 0 | 5 | 0 | logfile |
✔ | 7WY5 | 32884 | 2023-12-08 | 2022-02-15 | 2.83 | 2.25 | — | 2.0 | 0.005 | 0.75 | 0.0 | 0.05 | 12.83 | 0.00 | 1.986 | 1.32 | 0.00 | 5.4 | 94.6 | 0.0 | -0.28 | 0.77 | 0.76 | 3.50 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.45 | 0.00 | 2.154 | 5.58 | 0.92 | 3.5 | 96.5 | 0.0 | 0.77 | 0.39 | 0.78 | 0.78 | 2.47 | 8009 | 1013 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WXU | 32881 | 2023-12-08 | 2022-02-15 | 2.85 | 2.28 | — | 2.1 | 0.009 | 0.84 | 0.0 | 0.05 | 13.41 | 0.01 | 2.209 | 1.23 | 0.00 | 5.8 | 94.2 | 0.0 | -1.00 | 0.78 | 0.78 | 3.95 | 2.1 | 0.003 | 0.60 | 0.0 | 0.04 | 15.70 | 0.00 | 2.117 | 3.76 | 2.37 | 3.8 | 96.2 | 0.0 | 0.64 | 0.37 | 0.80 | 0.80 | 2.43 | 8116 | 1034 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UWJ | 26833 | 2023-12-07 | 2022-05-03 | 3.2 | 2.38 | 3.23 | 2.0 | 0.004 | 0.79 | 1.0 | 0.05 | 13.20 | 0.01 | 2.189 | 11.24 | 0.00 | 4.1 | 95.9 | 0.0 | -2.14 | 0.66 | 0.61 | 2.04 | 1.9 | 0.003 | 0.66 | 0.0 | 0.04 | 14.67 | 0.01 | 2.215 | 10.96 | 0.50 | 5.3 | 94.7 | 0.0 | -2.02 | 0.42 | 0.68 | 0.65 | 1.80 | 5314 | 664 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 7V69 | 31739 | 2023-12-09 | 2021-08-20 | 3.4 | 2.24 | — | 2.0 | 0.003 | 0.65 | 0.0 | 0.04 | 12.64 | 0.00 | 2.096 | 13.28 | 0.00 | 2.9 | 97.1 | 0.0 | -2.02 | 0.68 | 0.64 | 2.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8539 | 1122 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6A6B | 6988 | 2023-12-07 | 2018-06-27 | 3.07 | 3.41 | 2.07 | 3.4 | 0.006 | 1.07 | 0.0 | 0.07 | 7.61 | 0.00 | 2.263 | 7.15 | 0.00 | 11.3 | 88.7 | 0.0 | -3.85 | 0.53 | 0.71 | 3.91 | 3.4 | 0.006 | 0.78 | 0.0 | 0.05 | 13.53 | 0.00 | 2.139 | 17.09 | 0.37 | 10.4 | 89.6 | 0.0 | -2.88 | 2.17 | 0.52 | 0.71 | 2.87 | 5256 | 756 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GZ1 | 34387 | 2023-12-10 | 2022-09-24 | 3.4 | 3.77 | 3.44 | 3.7 | 0.004 | 0.68 | 0.0 | 0.05 | 14.39 | 0.00 | 1.940 | 11.26 | 0.00 | 5.0 | 95.0 | 0.0 | 0.65 | 0.55 | 0.77 | 2.03 | 3.7 | 0.004 | 0.70 | 0.0 | 0.04 | 15.90 | 0.00 | 2.161 | 10.08 | 0.55 | 5.1 | 94.9 | 0.0 | 0.91 | 0.54 | 0.56 | 0.80 | 1.87 | 11912 | 1445 | 10 | 0 | 19 | 0 | 0 | logfile |
✔ | 8iRU | 35686 | 2023-12-11 | 2023-03-19 | 3.2 | 3.42 | 2.15 | 3.3 | 0.013 | 1.78 | 5.0 | 0.10 | 12.62 | 0.02 | 2.528 | 0.83 | 0.00 | 3.4 | 96.6 | 0.0 | -0.54 | 0.66 | 0.76 | 3.92 | 3.3 | 0.003 | 0.58 | 0.0 | 0.04 | 14.35 | 0.00 | 1.940 | 10.86 | 0.32 | 3.2 | 96.8 | 0.0 | 0.97 | 1.44 | 0.67 | 0.80 | 2.94 | 17655 | 1123 | 5 | 0 | 10 | 0 | 8649 | logfile |
✔ | 7S8L | 24896 | 2023-12-08 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.45 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.52 | 0.00 | 2.231 | 3.14 | 1.70 | 3.2 | 96.8 | 0.0 | 1.39 | 0.34 | 0.84 | 0.84 | 3.79 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WY8 | 32887 | 2023-12-08 | 2022-02-15 | 2.83 | 2.24 | — | 2.0 | 0.007 | 0.81 | 0.0 | 0.05 | 12.03 | 0.01 | 2.220 | 1.00 | 0.00 | 4.1 | 95.9 | 0.0 | -0.39 | 0.76 | 0.76 | 3.57 | 2.0 | 0.003 | 0.57 | 0.0 | 0.04 | 15.15 | 0.00 | 2.173 | 4.56 | 2.07 | 3.2 | 96.8 | 0.0 | 1.11 | 0.42 | 0.77 | 0.78 | 2.72 | 8049 | 1015 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VUG | 32127 | 2023-12-09 | 2021-11-02 | 3.2 | 2.20 | — | 2.0 | 0.004 | 0.61 | 0.0 | 0.04 | 13.56 | 0.00 | 2.099 | 11.94 | 0.00 | 6.3 | 93.7 | 0.0 | -0.75 | 0.73 | 0.72 | 2.48 | 2.0 | 0.004 | 0.64 | 0.0 | 0.04 | 15.80 | 0.00 | 1.995 | 14.19 | 0.10 | 6.0 | 94.0 | 0.0 | -0.69 | 0.35 | 0.73 | 0.74 | 2.26 | 8924 | 1127 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7WY0 | 32883 | 2023-12-08 | 2022-02-15 | 2.83 | 2.21 | — | 2.0 | 0.007 | 0.87 | 0.0 | 0.06 | 11.98 | 0.00 | 1.690 | 7.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.00 | 0.74 | 0.73 | 3.63 | 2.0 | 0.004 | 0.68 | 0.0 | 0.04 | 15.36 | 0.00 | 2.124 | 12.48 | 1.97 | 5.3 | 94.7 | 0.0 | 0.15 | 0.47 | 0.75 | 0.75 | 2.68 | 8723 | 1112 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SP9 | 25369 | 2023-12-08 | 2021-11-02 | 2.9 | 3.20 | — | 3.1 | 0.004 | 0.57 | 0.0 | 0.05 | 12.07 | 0.00 | 2.245 | 5.66 | 0.00 | 1.2 | 98.8 | 0.0 | 1.62 | 0.71 | 0.78 | 2.80 | 3.1 | 0.004 | 0.63 | 0.0 | 0.04 | 15.00 | 0.00 | 2.274 | 10.64 | 2.39 | 2.9 | 97.0 | 0.1 | 1.12 | 1.27 | 0.74 | 0.85 | 3.38 | 5966 | 737 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WXW | 32882 | 2023-12-08 | 2022-02-15 | 2.84 | 2.24 | — | 2.1 | 0.005 | 0.78 | 0.0 | 0.05 | 12.89 | 0.01 | 2.256 | 1.29 | 0.00 | 4.4 | 95.6 | 0.0 | -2.04 | 0.75 | 0.75 | 3.34 | 2.0 | 0.004 | 0.60 | 0.0 | 0.04 | 15.75 | 0.00 | 2.196 | 5.30 | 1.58 | 2.8 | 97.2 | 0.0 | 0.32 | 1.17 | 0.78 | 0.78 | 2.66 | 8121 | 1032 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S8P | 24900 | 2023-12-08 | 2021-09-18 | 2.6 | 2.11 | 2.62 | 1.8 | 0.005 | 0.75 | 0.0 | 0.05 | 12.74 | 0.00 | 2.183 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | -2.01 | 0.73 | 0.75 | 4.73 | 1.9 | 0.003 | 0.62 | 0.0 | 0.04 | 15.34 | 0.00 | 2.120 | 3.18 | 1.62 | 5.1 | 94.9 | 0.0 | 0.50 | 0.37 | 0.84 | 0.84 | 3.79 | 8093 | 1089 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 7SCJ | 25036 | 2023-12-08 | 2021-09-28 | 3.4 | 2.31 | 2.97 | 2.0 | 0.004 | 0.60 | 0.0 | 0.05 | 13.30 | 0.01 | 2.200 | 9.22 | 0.00 | 5.7 | 94.3 | 0.0 | -0.25 | 0.75 | 0.72 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9336 | 1131 | 6 | 2 | 7 | 0 | 0 | logfile |