The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o2o | 0610 | 2023-12-12 | 2019-02-24 | 4.53 | 4.47 | — | 4.3 | 0.006 | 1.00 | 1.0 | 0.06 | 14.75 | 0.01 | 2.191 | 7.84 | 0.42 | 11.2 | 88.8 | 0.0 | -4.31 | 0.78 | 0.80 | — | 4.3 | 0.002 | 0.64 | 0.0 | 0.04 | 13.58 | 0.00 | 2.049 | 11.13 | 0.02 | 8.7 | 91.3 | 0.0 | -2.58 | 0.59 | 0.77 | 0.79 | — | 72637 | 9218 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E3Q | 27870 | 2023-12-10 | 2022-08-17 | 2.68 | 2.93 | 2.73 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 13.14 | 0.00 | 2.219 | 8.89 | 0.14 | 4.7 | 95.0 | 0.3 | -0.58 | 0.74 | 0.84 | 4.68 | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 16.17 | 0.00 | 2.166 | 8.77 | 1.65 | 4.7 | 95.1 | 0.2 | -0.53 | 0.37 | 0.74 | 0.85 | 4.06 | 12739 | 1603 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7S9D | 24933 | 2023-12-09 | 2021-09-20 | 4.6 | 4.40 | — | 4.1 | 0.006 | 0.89 | 0.0 | 0.05 | 11.27 | 0.00 | 2.095 | 23.20 | 0.35 | 10.7 | 89.0 | 0.3 | -0.95 | 0.61 | 0.80 | — | 4.1 | 0.002 | 0.63 | 0.0 | 0.04 | 11.92 | 0.00 | 2.234 | 10.40 | 0.00 | 7.4 | 92.3 | 0.3 | -0.77 | 0.46 | 0.59 | 0.77 | — | 10462 | 1354 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ET6 | 28586 | 2023-12-08 | 2022-10-16 | 3.57 | 3.92 | 3.77 | 3.9 | 0.003 | 0.53 | 0.0 | 0.04 | 11.90 | 0.00 | 1.831 | 5.02 | 0.47 | 3.6 | 96.4 | 0.0 | 0.54 | 0.52 | 0.71 | 1.69 | 3.9 | 0.002 | 0.55 | 0.0 | 0.03 | 14.96 | 0.00 | 1.992 | 8.33 | 0.94 | 4.2 | 95.8 | 0.0 | 1.31 | 1.37 | 0.51 | 0.71 | 1.57 | 8092 | 532 | 2 | 0 | 2 | 0 | 4007 | logfile |
✔ | 6PQQ | 20451 | 2023-12-12 | 2019-07-09 | 2.81 | 3.26 | 2.82 | 3.2 | 0.011 | 1.26 | 0.0 | 0.07 | 21.09 | 0.01 | 2.316 | 4.85 | 0.20 | 3.4 | 96.6 | 0.0 | -3.37 | 0.69 | 0.79 | 2.50 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 18.53 | 0.00 | 2.163 | 6.04 | 1.54 | 2.5 | 97.5 | 0.0 | 1.82 | 1.28 | 0.73 | 0.84 | 1.78 | 20016 | 2416 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 7RTT | 24688 | 2023-12-08 | 2021-08-15 | 3.5 | 3.91 | — | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 17.15 | 0.00 | 2.239 | 5.02 | 0.00 | 3.6 | 96.4 | 0.0 | 2.65 | 0.60 | 0.73 | 1.03 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 15.78 | 0.00 | 2.186 | 6.22 | 0.00 | 4.2 | 95.8 | 0.0 | 3.70 | 1.65 | 0.61 | 0.73 | 0.04 | 6268 | 791 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 8DZE | 27795 | 2023-12-11 | 2022-08-07 | 2.99 | 3.47 | 3.03 | 3.4 | 0.008 | 0.83 | 0.0 | 0.05 | 16.65 | 0.01 | 2.289 | 4.10 | 0.64 | 7.0 | 92.7 | 0.2 | -0.16 | 0.70 | 0.79 | 2.13 | 3.4 | 0.002 | 0.53 | 0.0 | 0.04 | 16.54 | 0.00 | 2.230 | 5.58 | 2.88 | 8.2 | 91.6 | 0.2 | 0.56 | 1.14 | 0.69 | 0.82 | 2.54 | 19308 | 2478 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7UPi | 26667 | 2023-12-08 | 2022-04-15 | 2.89 | 3.71 | 2.90 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 9.09 | 0.00 | 1.843 | 2.56 | 0.00 | 1.9 | 98.1 | 0.0 | -0.12 | 0.91 | 0.87 | 3.97 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.006 | 4.22 | 0.11 | 2.1 | 97.9 | 0.0 | -0.22 | 2.21 | 0.90 | 0.89 | 3.98 | 7775 | 972 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 5A6F | 3063 | 2023-12-08 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.7 | 0.002 | 0.57 | 0.0 | 0.04 | 11.01 | 0.00 | 1.975 | 11.65 | 0.00 | 5.8 | 94.2 | 0.0 | -0.93 | 1.02 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 7M42 | 23662 | 2023-12-08 | 2021-03-19 | 3.3 | 3.66 | — | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 12.88 | 0.00 | 2.128 | 6.83 | 1.22 | 3.5 | 96.4 | 0.1 | -2.65 | 0.63 | 0.65 | 3.52 | 3.6 | 0.002 | 0.60 | 0.0 | 0.04 | 14.59 | 0.00 | 2.139 | 7.34 | 0.33 | 4.2 | 95.7 | 0.1 | -0.74 | 0.95 | 0.68 | 0.84 | 3.57 | 8115 | 1070 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6oKT | 20104 | 2023-12-14 | 2019-04-15 | 4.2 | 4.31 | — | 4.2 | 0.007 | 0.96 | 0.0 | 0.06 | 15.35 | 0.01 | 2.188 | 7.94 | 1.60 | 11.9 | 88.1 | 0.0 | -4.31 | 0.73 | 0.81 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 13.62 | 0.00 | 2.123 | 10.59 | 0.00 | 7.9 | 92.1 | 0.0 | -2.29 | 0.58 | 0.73 | 0.80 | — | 27048 | 3451 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6o0Z | 0585 | 2023-12-09 | 2019-02-17 | 3.3 | 3.94 | — | 3.6 | 0.006 | 0.72 | 0.0 | 0.04 | 18.49 | 0.00 | 2.302 | 2.58 | 0.27 | 6.3 | 93.7 | 0.0 | -4.11 | 0.86 | 0.88 | 3.46 | 3.6 | 0.002 | 0.52 | 0.0 | 0.03 | 18.64 | 0.00 | 2.161 | 4.96 | 0.27 | 5.5 | 94.5 | 0.0 | 0.22 | 0.31 | 0.85 | 0.88 | 3.22 | 11912 | 1288 | 4 | 135 | 0 | 0 | 0 | logfile |
✔ | 8EL7 | 28223 | 2023-12-07 | 2022-09-23 | 2.8 | 3.11 | 2.95 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 13.13 | 0.00 | 2.295 | 2.43 | 0.00 | 1.7 | 98.3 | 0.0 | 0.97 | 0.57 | 0.80 | 2.31 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 14.99 | 0.00 | 2.314 | 1.88 | 1.74 | 2.2 | 97.8 | 0.0 | 0.68 | 0.27 | 0.58 | 0.81 | 2.13 | 4562 | 604 | 2 | 0 | 0 | 5 | 0 | logfile |
✔ | 7S8N | 24898 | 2023-12-08 | 2021-09-18 | 2.9 | 2.20 | 2.92 | 2.1 | 0.012 | 0.90 | 0.0 | 0.06 | 13.07 | 0.01 | 2.202 | 4.10 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 0.79 | 0.80 | 3.96 | 2.0 | 0.002 | 0.55 | 0.0 | 0.04 | 15.70 | 0.00 | 2.221 | 3.59 | 0.98 | 2.1 | 97.9 | 0.0 | 0.87 | 1.01 | 0.82 | 0.82 | 2.80 | 8154 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6SXo | 10344 | 2023-12-10 | 2019-09-26 | 3.3 | 3.36 | — | 3.3 | 0.009 | 1.35 | 0.0 | 0.07 | 22.05 | 0.01 | 2.142 | 5.99 | 1.16 | 4.7 | 95.3 | 0.0 | -4.39 | 0.26 | 0.72 | 2.92 | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 21.74 | 0.00 | 2.118 | 10.12 | 0.12 | 2.7 | 97.3 | 0.0 | -0.83 | 0.70 | 0.26 | 0.76 | 2.05 | 14894 | 973 | 8 | 326 | 0 | 0 | 0 | logfile |
✔ | 7N76 | 24221 | 2023-12-08 | 2021-06-09 | 2.9 | 3.57 | 2.96 | 3.3 | 0.005 | 0.64 | 0.0 | 0.07 | 12.16 | 0.00 | 2.074 | 5.80 | 0.00 | 3.3 | 96.7 | 0.0 | 0.22 | 0.70 | 0.83 | 3.50 | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 13.90 | 0.00 | 2.215 | 5.87 | 0.84 | 1.6 | 98.4 | 0.0 | 2.30 | 1.13 | 0.68 | 0.84 | 2.18 | 7399 | 1036 | 1 | 0 | 0 | 3 | 0 | logfile |
✔ | 7T2E | 25611 | 2023-12-07 | 2021-12-03 | 2.7 | 3.14 | — | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.11 | 0.00 | 2.242 | 1.92 | 1.18 | 0.3 | 99.7 | 0.0 | 0.14 | 0.34 | 0.84 | 5.04 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 16.21 | 0.00 | 2.222 | 2.35 | 1.18 | 0.3 | 99.7 | 0.0 | 0.45 | 0.13 | 0.36 | 0.86 | 4.79 | 2390 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N77 | 24222 | 2023-12-08 | 2021-06-09 | 3.2 | 4.05 | 3.31 | 3.7 | 0.006 | 1.31 | 0.0 | 0.06 | 13.19 | 0.01 | 1.692 | 9.63 | 0.14 | 3.5 | 96.5 | 0.0 | -1.56 | 0.64 | 0.74 | 1.92 | 3.7 | 0.002 | 0.89 | 0.0 | 0.04 | 13.61 | 0.00 | 2.060 | 5.67 | 0.28 | 2.0 | 98.0 | 0.0 | 2.14 | 1.63 | 0.68 | 0.82 | 1.06 | 7470 | 1036 | 1 | 0 | 4 | 2 | 0 | logfile |
✔ | 6UVR | 20914 | 2023-12-12 | 2019-11-04 | 4.0 | 3.50 | — | 3.4 | 0.011 | 1.12 | 0.0 | 0.06 | 8.48 | 0.01 | 2.237 | 10.49 | 0.00 | 10.4 | 89.6 | 0.0 | -5.14 | 0.62 | 0.76 | — | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 12.92 | 0.00 | 2.129 | 5.68 | 0.00 | 4.6 | 95.4 | 0.0 | 2.76 | 1.43 | 0.65 | 0.80 | — | 22692 | 1920 | 12 | 0 | 0 | 0 | 9696 | logfile |
✔ | 7QB9 | 13882 | 2023-12-07 | 2021-11-18 | 3.1 | 3.36 | 3.16 | 3.4 | 0.008 | 1.01 | 0.0 | 0.06 | 12.61 | 0.01 | 2.291 | 2.92 | 0.00 | 3.5 | 96.5 | 0.0 | -2.92 | 0.56 | 0.81 | 2.83 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 12.34 | 0.00 | 2.213 | 3.98 | 0.19 | 2.2 | 97.8 | 0.0 | 2.48 | 0.38 | 0.54 | 0.82 | 2.18 | 5419 | 598 | 4 | 0 | 26 | 0 | 0 | logfile |