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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 1oED | 1044 | 2024-01-17 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 224.94 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.005 | 1.06 | 0.0 | 0.05 | 16.10 | 0.01 | 2.206 | 23.77 | 2.08 | 2.6 | 97.4 | 0.0 | 1.81 | 2.72 | 0.59 | 0.38 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TA3 | 10421 | 2024-01-18 | 2019-10-29 | 3.8 | 4.18 | — | 3.9 | 0.024 | 2.45 | 4.0 | 0.08 | 18.96 | 0.01 | 0.317 | 210.72 | 16.02 | 0.8 | 99.2 | 0.0 | 1.86 | 0.67 | 0.49 | 0.26 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 18.35 | 0.01 | 1.266 | 30.60 | 4.47 | 4.1 | 95.9 | 0.0 | -0.17 | 2.46 | 0.78 | 0.74 | 0.37 | 9491 | 1201 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2024-01-17 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 179.94 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.1 | 0.005 | 1.19 | 0.0 | 0.06 | 17.22 | 0.01 | 2.007 | 33.74 | 4.89 | 10.6 | 88.3 | 1.2 | -2.44 | 1.71 | 0.31 | 0.42 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2024-01-19 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.91 | 0.0 | 0.04 | 18.23 | 0.00 | 1.845 | 75.77 | 12.68 | 22.2 | 74.0 | 3.8 | -4.55 | 0.83 | 0.39 | 0.73 | 1.17 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 7CR4 | 30447 | 2024-01-20 | 2020-08-12 | 3.9 | 4.24 | — | 3.9 | 0.008 | 0.65 | 0.0 | 0.04 | 13.14 | 0.00 | 1.833 | 102.74 | 0.00 | 4.6 | 95.4 | 0.0 | -2.89 | 0.59 | 0.76 | 0.53 | 3.9 | 0.004 | 0.86 | 0.0 | 0.04 | 16.40 | 0.00 | 2.121 | 23.63 | 2.86 | 2.6 | 97.4 | 0.0 | 0.74 | 1.40 | 0.56 | 0.72 | 0.34 | 15988 | 1968 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 5ND1 | 3619 | 2024-01-20 | 2017-03-07 | 3.7 | 3.86 | — | 3.9 | 0.017 | 2.27 | 54.0 | 0.15 | 22.44 | 0.01 | 0.204 | 100.40 | 32.66 | 7.8 | 89.7 | 2.5 | -2.95 | 0.47 | 0.82 | 1.08 | 3.9 | 0.005 | 0.84 | 0.0 | 0.05 | 18.47 | 0.00 | 2.069 | 15.66 | 9.47 | 10.2 | 89.3 | 0.5 | -2.20 | 0.81 | 0.49 | 0.84 | 0.92 | 14963 | 1977 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LY6 | 4118 | 2024-01-17 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.004 | 0.81 | 0.0 | 0.04 | 13.90 | 0.00 | 2.192 | 16.63 | 0.00 | 10.2 | 89.3 | 0.4 | -2.86 | 2.17 | 0.40 | 0.77 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3LoS | 5137 | 2024-01-19 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 87.93 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.005 | 1.29 | 0.0 | 0.06 | 15.90 | 0.01 | 2.091 | 33.18 | 0.00 | 21.9 | 74.2 | 3.9 | -4.38 | 1.32 | 0.63 | 0.56 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9L | 2871 | 2024-01-18 | 2015-02-04 | 4.0 | 4.10 | — | 4.0 | 0.022 | 1.96 | 105.0 | 0.12 | 19.79 | 0.01 | 1.058 | 81.48 | 27.30 | 10.5 | 88.6 | 0.9 | -4.09 | 0.66 | 0.68 | — | 4.0 | 0.045 | 3.09 | 64.0 | 0.12 | 21.30 | 0.02 | 1.887 | 101.09 | 29.26 | 40.4 | 58.0 | 1.7 | -7.66 | 2.88 | 0.73 | 0.82 | — | 112951 | 8688 | 31 | 0 | 8320 | 0 | 0 | logfile |
✔ | 6BZE | 7314 | 2024-01-20 | 2017-12-23 | 4.0 | 4.03 | — | 4.0 | 0.009 | 1.42 | 0.0 | 0.08 | 17.34 | 0.01 | 1.648 | 79.81 | 9.00 | 13.2 | 86.4 | 0.4 | -5.34 | 0.37 | 0.48 | — | 4.0 | 0.004 | 1.05 | 0.0 | 0.05 | 19.17 | 0.00 | 2.002 | 31.09 | 5.25 | 12.5 | 87.5 | 0.0 | -1.78 | 2.76 | 0.51 | 0.73 | — | 7072 | 848 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DA4 | 30622 | 2024-01-17 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.98 | 0.0 | 0.04 | 11.88 | 0.00 | 2.201 | 17.17 | 0.00 | 25.0 | 75.0 | 0.0 | -5.95 | 3.06 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J06 | 5185 | 2024-01-19 | 2011-04-26 | 3.3 | 2.88 | — | 3.5 | 0.011 | 2.34 | 441.0 | 0.15 | 21.41 | 0.01 | 1.607 | 79.64 | 14.71 | 21.1 | 65.4 | 13.5 | -7.24 | 0.56 | 0.80 | 1.90 | 3.3 | 0.004 | 0.98 | 3.0 | 0.05 | 20.97 | 0.01 | 1.647 | 17.79 | 5.42 | 7.3 | 90.8 | 1.9 | -2.16 | 1.24 | 0.55 | 0.78 | 1.94 | 62916 | 7595 | 98 | 147 | 0 | 0 | 0 | logfile |
✔ | 5Y4o | 6805 | 2024-01-19 | 2017-08-04 | 3.8 | 3.55 | — | 3.6 | 0.022 | 2.44 | 28.0 | 0.12 | 19.88 | 0.02 | 0.471 | 78.50 | 20.31 | 7.8 | 87.8 | 4.5 | -2.08 | 0.55 | 0.62 | 0.20 | 3.6 | 0.003 | 0.76 | 0.0 | 0.04 | 17.30 | 0.00 | 2.069 | 13.36 | 5.80 | 7.8 | 91.5 | 0.6 | -0.34 | 1.75 | 0.59 | 0.73 | 1.09 | 12341 | 1561 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JD8 | 6640 | 2024-01-19 | 2016-05-01 | 4.43 | 4.58 | — | 4.4 | 0.015 | 1.56 | 5.0 | 0.13 | 17.70 | 0.02 | 1.335 | 78.13 | 11.82 | 11.9 | 79.7 | 8.4 | -3.27 | 0.54 | 0.62 | — | 4.4 | 0.004 | 0.92 | 0.0 | 0.05 | 12.44 | 0.00 | 2.031 | 20.25 | 0.00 | 7.9 | 91.3 | 0.8 | -0.89 | 1.21 | 0.57 | 0.73 | — | 8050 | 1133 | 7 | 0 | 25 | 0 | 0 | logfile |
✔ | 7AKV | 11814 | 2024-01-17 | 2020-10-02 | 3.6 | 3.04 | 3.41 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 2.005 | 76.42 | 0.16 | 17.7 | 82.2 | 0.1 | -4.19 | 0.81 | 0.82 | 2.44 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 16.02 | 0.00 | 2.039 | 71.21 | 3.41 | 13.5 | 86.4 | 0.1 | -3.06 | 0.85 | 0.81 | 0.82 | 1.88 | 6201 | 799 | 2 | 0 | 0 | 0 | 245 | logfile |
✔ | 6i1Y | 0327 | 2024-01-18 | 2018-10-30 | 3.4 | 3.52 | — | 3.4 | 0.015 | 2.01 | 16.0 | 0.10 | 13.31 | 0.02 | 1.301 | 75.63 | 0.72 | 10.9 | 85.8 | 3.3 | -5.20 | 0.79 | 0.83 | 1.55 | 3.4 | 0.003 | 0.70 | 0.0 | 0.05 | 16.14 | 0.01 | 2.114 | 15.64 | 2.22 | 5.3 | 94.5 | 0.2 | -1.67 | 1.45 | 0.78 | 0.80 | 1.66 | 56520 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J8i | 9782 | 2024-01-19 | 2019-01-19 | 3.2 | 3.36 | — | 3.3 | 0.010 | 1.51 | 0.0 | 0.16 | 21.89 | 0.01 | 1.829 | 71.34 | 28.73 | 2.5 | 96.2 | 1.3 | 2.78 | 0.59 | 0.76 | 1.66 | 3.4 | 0.003 | 0.75 | 0.0 | 0.06 | 18.18 | 0.00 | 2.151 | 9.17 | 5.05 | 4.0 | 95.8 | 0.2 | 0.85 | 1.41 | 0.59 | 0.82 | 1.74 | 11764 | 1433 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6J8J | 9782 | 2024-01-19 | 2019-01-19 | 3.2 | 3.36 | — | 3.3 | 0.010 | 1.51 | 0.0 | 0.16 | 21.90 | 0.01 | 1.829 | 71.00 | 28.80 | 2.5 | 96.2 | 1.3 | 2.79 | 0.59 | 0.76 | 1.66 | 3.4 | 0.005 | 0.82 | 0.0 | 0.07 | 18.15 | 0.00 | 2.100 | 10.52 | 5.05 | 3.9 | 95.8 | 0.3 | 0.43 | 1.41 | 0.59 | 0.83 | 1.79 | 11764 | 1433 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6LBA | 0868 | 2024-01-20 | 2019-11-13 | 4.1 | 4.19 | — | 4.1 | 0.005 | 1.04 | 8.0 | 0.06 | 14.23 | 0.01 | 1.605 | 70.19 | 3.56 | 10.9 | 88.6 | 0.5 | -2.46 | 0.76 | 0.78 | — | 4.1 | 0.003 | 0.71 | 0.0 | 0.04 | 14.57 | 0.00 | 2.113 | 15.47 | 0.00 | 7.1 | 92.9 | 0.0 | 0.37 | 1.64 | 0.77 | 0.79 | — | 14992 | 1864 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NXD | 12637 | 2024-01-19 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 14.20 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.003 | 0.78 | 0.0 | 0.05 | 11.16 | 0.00 | 1.951 | 22.24 | 0.00 | 5.7 | 94.3 | 0.0 | -1.10 | 1.48 | 0.89 | 0.72 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |