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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6T90 | 10406 | 2024-01-19 | 2019-10-25 | 3.05 | 3.74 | — | 3.3 | 0.022 | 1.52 | 0.0 | 0.09 | 24.66 | 0.01 | 2.459 | 0.40 | 0.00 | 0.3 | 99.7 | 0.0 | 1.02 | 0.84 | 0.81 | 4.34 | 3.3 | 0.004 | 0.62 | 0.0 | 0.03 | 26.38 | 0.00 | 2.116 | 6.65 | 1.59 | 1.2 | 98.8 | 0.0 | 2.67 | 2.80 | 0.86 | 0.87 | 2.61 | 13031 | 903 | 19 | 282 | 9 | 0 | 0 | logfile |
✔ | 7WQX | 32715 | 2024-01-17 | 2022-01-26 | 2.7 | 2.26 | — | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 11.77 | 0.00 | 2.181 | 9.03 | 2.56 | 6.0 | 94.0 | 0.0 | -3.61 | 0.73 | 0.65 | 2.93 | 3.2 | 0.003 | 0.71 | 0.0 | 0.05 | 14.33 | 0.00 | 2.191 | 14.76 | 2.33 | 7.2 | 92.8 | 0.0 | -1.64 | 0.83 | 0.76 | 0.69 | 2.01 | 4022 | 501 | 1 | 0 | 9 | 0 | 0 | logfile |
✔ | 6KKR | 0701 | 2024-01-18 | 2019-07-27 | 2.9 | 3.08 | — | 3.1 | 0.008 | 1.11 | 0.0 | 0.06 | 12.22 | 0.01 | 2.348 | 3.23 | 0.23 | 3.9 | 96.1 | 0.0 | -3.53 | 0.61 | 0.83 | 3.04 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 14.44 | 0.00 | 2.136 | 5.82 | 3.29 | 3.7 | 96.3 | 0.0 | 1.40 | 1.21 | 0.60 | 0.85 | 2.35 | 8416 | 1074 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7F5B | 31464 | 2024-01-20 | 2021-06-21 | 3.9 | 4.19 | — | 4.1 | 0.004 | 0.82 | 1.0 | 0.05 | 16.74 | 0.00 | 2.110 | 14.96 | 0.18 | 8.7 | 91.2 | 0.1 | -1.83 | 0.69 | 0.79 | 1.36 | 4.1 | 0.004 | 0.70 | 0.0 | 0.04 | 16.32 | 0.00 | 2.155 | 12.64 | 2.42 | 9.2 | 90.8 | 0.0 | -1.32 | 0.42 | 0.68 | 0.79 | 1.11 | 15328 | 1921 | 11 | 0 | 14 | 0 | 0 | logfile |
✔ | 7V8i | 31802 | 2024-01-18 | 2021-08-23 | 3.6 | 3.75 | — | 3.7 | 0.005 | 0.87 | 0.0 | 0.05 | 15.81 | 0.01 | 2.007 | 11.55 | 1.36 | 3.9 | 95.8 | 0.3 | -0.76 | 0.59 | 0.61 | 1.25 | 3.7 | 0.004 | 0.69 | 0.0 | 0.04 | 17.06 | 0.00 | 1.930 | 12.41 | 2.51 | 4.4 | 95.5 | 0.1 | -0.72 | 1.14 | 0.66 | 0.71 | 1.13 | 9388 | 1261 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7FiN | 31604 | 2024-01-18 | 2021-07-31 | 3.1 | 3.73 | — | 3.6 | 0.004 | 0.81 | 0.0 | 0.06 | 8.43 | 0.01 | 2.249 | 4.31 | 0.00 | 2.5 | 97.5 | 0.0 | -1.11 | 0.64 | 0.77 | 2.24 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 13.86 | 0.00 | 2.071 | 9.10 | 2.42 | 2.3 | 97.7 | 0.0 | 1.21 | 2.33 | 0.66 | 0.80 | 1.84 | 9524 | 1169 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6KKT | 0702 | 2024-01-18 | 2019-07-27 | 2.9 | 3.10 | — | 3.1 | 0.011 | 1.17 | 0.0 | 0.07 | 12.16 | 0.01 | 2.343 | 4.35 | 0.34 | 3.6 | 96.4 | 0.0 | -3.62 | 0.67 | 0.85 | 2.65 | 3.1 | 0.004 | 1.24 | 0.0 | 0.05 | 14.52 | 0.00 | 2.080 | 5.82 | 2.83 | 3.1 | 96.9 | 0.0 | 1.35 | 2.23 | 0.66 | 0.86 | 1.90 | 8416 | 1074 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7EVM | 31329 | 2024-01-18 | 2021-05-21 | 2.5 | 3.26 | — | 3.1 | 0.005 | 0.89 | 1.0 | 0.06 | 15.27 | 0.00 | 2.175 | 11.52 | 3.36 | 3.8 | 96.2 | 0.0 | -2.23 | 0.59 | 0.70 | 2.20 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 16.59 | 0.00 | 2.181 | 11.28 | 3.25 | 2.9 | 97.1 | 0.0 | 0.45 | 1.41 | 0.62 | 0.77 | 2.49 | 8462 | 1037 | 5 | 0 | 7 | 0 | 0 | logfile |
✔ | 7DNJ | 30785 | 2024-01-19 | 2020-12-09 | 3.3 | 3.62 | — | 3.5 | 0.008 | 0.78 | 0.0 | 0.05 | 15.34 | 0.00 | 2.199 | 16.53 | 0.33 | 3.9 | 96.0 | 0.1 | -1.61 | 0.80 | 0.84 | 2.71 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 17.52 | 0.00 | 2.150 | 15.57 | 2.71 | 2.2 | 97.8 | 0.0 | 0.41 | 1.18 | 0.81 | 0.85 | 1.75 | 10926 | 1369 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oGE | 20055 | 2024-01-19 | 2019-04-02 | 4.36 | 4.64 | — | 4.4 | 0.008 | 1.16 | 0.0 | 0.06 | 13.42 | 0.01 | 2.203 | 12.45 | 0.16 | 13.5 | 86.4 | 0.1 | -4.34 | 0.80 | 0.81 | — | 4.4 | 0.004 | 0.80 | 0.0 | 0.05 | 12.49 | 0.00 | 2.079 | 22.69 | 0.00 | 11.0 | 88.9 | 0.1 | -2.88 | 0.88 | 0.80 | 0.80 | — | 11494 | 1489 | 7 | 0 | 9 | 0 | 0 | logfile |
✔ | 7NGH | 12314 | 2024-01-19 | 2021-02-09 | 3.5 | 4.33 | — | 4.0 | 0.005 | 0.64 | 0.0 | 0.04 | 12.54 | 0.00 | 2.169 | 18.02 | 0.00 | 4.9 | 95.1 | 0.0 | -2.00 | 0.74 | 0.86 | 1.13 | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 14.21 | 0.00 | 2.090 | 15.52 | 1.57 | 3.8 | 96.2 | 0.0 | 1.14 | 1.12 | 0.73 | 0.84 | 0.53 | 10315 | 1374 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NT5 | 0502 | 2024-01-17 | 2019-01-28 | 4.1 | 4.28 | — | 4.1 | 0.006 | 0.93 | 0.0 | 0.05 | 10.32 | 0.01 | 2.300 | 3.59 | 0.41 | 4.7 | 95.3 | 0.0 | -2.40 | 0.73 | 0.82 | — | 4.1 | 0.005 | 0.71 | 0.0 | 0.04 | 12.53 | 0.00 | 2.201 | 9.04 | 0.00 | 3.6 | 96.4 | 0.0 | 1.46 | 1.15 | 0.74 | 0.83 | — | 4586 | 584 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZXA | 11516 | 2024-01-18 | 2020-07-29 | 2.38 | 2.34 | — | 2.3 | 0.019 | 3.61 | 0.0 | 0.07 | 21.62 | 0.01 | 2.324 | 10.63 | 5.21 | 12.8 | 87.2 | 0.0 | -1.00 | 0.75 | 0.90 | 5.13 | 2.3 | 0.004 | 1.87 | 0.0 | 0.05 | 21.18 | 0.01 | 2.269 | 11.37 | 3.87 | 11.9 | 88.1 | 0.0 | 0.95 | 0.74 | 0.75 | 0.88 | 3.87 | 8442 | 791 | 28 | 0 | 35 | 0 | 0 | logfile |
✔ | 6XWN | 10632 | 2024-01-18 | 2020-01-24 | 3.47 | 4.19 | — | 3.9 | 0.004 | 0.61 | 0.0 | 0.04 | 15.89 | 0.00 | 2.121 | 11.01 | 8.00 | 3.3 | 96.7 | 0.0 | -2.83 | 0.70 | 0.77 | 1.38 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.08 | 0.00 | 2.172 | 10.86 | 2.00 | 2.3 | 97.7 | 0.0 | 1.66 | 0.55 | 0.72 | 0.85 | 0.64 | 9547 | 1276 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 7M4U | 23666 | 2024-01-17 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 21.77 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.006 | 0.81 | 0.0 | 0.04 | 22.11 | 0.01 | 1.685 | 5.90 | 3.48 | 3.7 | 96.2 | 0.2 | 0.43 | 1.73 | 0.82 | 0.81 | 3.49 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 7KH0 | 22872 | 2024-01-19 | 2020-10-19 | 2.8 | 3.67 | — | 3.3 | 0.011 | 0.76 | 2.0 | 0.05 | 13.35 | 0.00 | 2.171 | 6.31 | 0.57 | 3.1 | 96.9 | 0.0 | 0.17 | 0.76 | 0.88 | 4.01 | 3.3 | 0.005 | 0.68 | 0.0 | 0.04 | 15.89 | 0.00 | 2.155 | 7.79 | 1.70 | 2.2 | 97.8 | 0.0 | 0.82 | 0.46 | 0.74 | 0.86 | 3.41 | 9898 | 1273 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 7EMF | 31191 | 2024-01-19 | 2021-04-13 | 3.5 | 3.62 | — | 3.5 | 0.011 | 1.17 | 16.0 | 0.07 | 15.26 | 0.01 | 2.207 | 7.30 | 1.08 | 5.6 | 93.8 | 0.6 | -2.65 | 0.74 | 0.71 | 1.83 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 16.95 | 0.00 | 2.151 | 10.69 | 3.08 | 5.5 | 94.4 | 0.1 | 1.19 | 1.33 | 0.79 | 0.79 | 1.57 | 62334 | 7916 | 29 | 0 | 2 | 0 | 0 | logfile |
✔ | 7CKY | 30394 | 2024-01-20 | 2020-07-20 | 3.2 | 3.28 | — | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 14.49 | 0.00 | 2.154 | 17.29 | 1.51 | 4.3 | 95.7 | 0.0 | -2.84 | 0.46 | 0.50 | 0.39 | 3.3 | 0.004 | 0.95 | 1.0 | 0.04 | 16.22 | 0.00 | 2.111 | 19.41 | 2.56 | 5.3 | 94.7 | 0.0 | -0.96 | 1.68 | 0.59 | 0.74 | 1.89 | 8128 | 1038 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 5V4S | 8633 | 2024-01-19 | 2017-03-10 | 4.2 | 7.95 | — | 4.2 | 0.012 | 1.56 | 20.0 | 0.14 | 8.80 | 0.01 | 2.352 | 3.29 | 0.00 | 6.6 | 93.1 | 0.3 | -1.95 | 0.55 | 0.60 | — | 4.2 | 0.003 | 0.61 | 0.0 | 0.04 | 10.17 | 0.00 | 2.195 | 12.66 | 0.00 | 2.5 | 97.5 | 0.0 | 2.96 | 0.84 | 0.62 | 0.70 | — | 10756 | 1548 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7D99 | 30617 | 2024-01-20 | 2020-10-12 | 2.9 | 3.02 | — | 3.1 | 0.009 | 1.09 | 0.0 | 0.06 | 9.92 | 0.01 | 2.187 | 2.92 | 0.41 | 4.7 | 95.1 | 0.1 | -5.36 | 0.71 | 0.85 | 3.24 | 3.1 | 0.003 | 0.68 | 0.0 | 0.04 | 14.90 | 0.00 | 2.172 | 6.26 | 2.32 | 3.6 | 96.4 | 0.0 | 0.57 | 0.64 | 0.65 | 0.86 | 2.62 | 13800 | 1782 | 8 | 0 | 14 | 0 | 0 | logfile |