The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MHY | 23836 | 2024-01-18 | 2021-04-16 | 2.7 | 2.86 | — | 2.8 | 0.012 | 1.07 | 1.0 | 1.79 | 53.38 | 0.01 | 2.160 | 6.30 | 0.54 | 3.3 | 96.7 | 0.0 | 1.01 | 0.65 | 0.88 | 3.72 | 2.8 | 0.003 | 2.70 | 0.0 | 0.26 | 35.45 | 0.00 | 2.166 | 6.70 | 2.83 | 3.2 | 96.8 | 0.0 | 1.42 | 0.38 | 0.61 | 0.88 | 2.96 | 7904 | 912 | 6 | 0 | 18 | 15 | 0 | logfile |
✔ | 7MHZ | 23837 | 2024-01-17 | 2021-04-16 | 3.2 | 3.82 | — | 3.7 | 0.005 | 0.77 | 0.0 | 1.63 | 49.49 | 0.00 | 2.210 | 7.55 | 0.00 | 3.4 | 96.6 | 0.0 | 1.45 | 0.61 | 0.79 | 2.94 | 3.7 | 0.002 | 2.50 | 0.0 | 0.25 | 33.72 | 0.00 | 2.166 | 6.11 | 1.56 | 2.7 | 97.3 | 0.0 | 1.84 | 0.35 | 0.60 | 0.79 | 2.65 | 6189 | 723 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7URF | 26711 | 2024-01-17 | 2022-04-21 | 2.8 | 2.78 | 2.80 | 2.9 | 0.009 | 0.78 | 0.0 | 1.24 | 38.42 | 0.00 | 2.148 | 5.35 | 0.00 | 3.1 | 96.9 | 0.0 | -0.96 | 0.62 | 0.88 | 3.48 | 2.9 | 0.003 | 1.89 | 0.0 | 0.19 | 28.73 | 0.00 | 2.173 | 5.68 | 2.73 | 3.4 | 96.6 | 0.0 | 1.90 | 1.74 | 0.63 | 0.89 | 2.97 | 6133 | 722 | 5 | 0 | 8 | 0 | 0 | logfile |
✔ | 6T7D | 10394 | 2024-01-18 | 2019-10-21 | 4.4 | 4.45 | 4.29 | 4.1 | 0.005 | 0.86 | 0.0 | 0.05 | 32.58 | 0.01 | 2.107 | 2.55 | 0.00 | 2.0 | 98.0 | 0.0 | -2.34 | 0.86 | 0.77 | — | 4.1 | 0.004 | 0.68 | 0.0 | 0.03 | 32.05 | 0.00 | 2.158 | 13.41 | 0.00 | 5.0 | 95.0 | 0.0 | 2.76 | 0.73 | 0.87 | 0.83 | — | 8209 | 853 | 11 | 234 | 0 | 0 | 0 | logfile |
✔ | 6M4D | 30076 | 2024-01-19 | 2020-03-06 | 4.4 | 4.58 | — | 4.3 | 0.007 | 0.84 | 0.0 | 0.05 | 31.37 | 0.01 | 2.074 | 25.84 | 0.71 | 6.6 | 92.8 | 0.6 | -2.81 | 0.88 | 0.82 | — | 4.3 | 0.004 | 0.70 | 0.0 | 0.04 | 30.27 | 0.01 | 2.169 | 20.29 | 0.00 | 2.4 | 97.0 | 0.6 | 0.68 | 1.44 | 0.88 | 0.82 | — | 10497 | 682 | 10 | 250 | 0 | 0 | 0 | logfile |
✔ | 7Uo5 | 26640 | 2024-01-20 | 2022-04-12 | 3.1 | 3.62 | 3.02 | 3.0 | 0.015 | 2.22 | 0.0 | 0.12 | 31.27 | 0.06 | 2.328 | 2.33 | 1.02 | 6.4 | 92.7 | 0.9 | -2.73 | 0.80 | 0.60 | 3.19 | 3.0 | 0.005 | 0.83 | 0.0 | 0.05 | 30.11 | 0.01 | 1.789 | 34.52 | 3.06 | 16.4 | 82.7 | 0.9 | -3.65 | 1.53 | 0.81 | 0.66 | 1.42 | 13979 | 112 | 2 | 373 | 7 | 0 | 5024 | logfile |
✔ | 8EUE | 28612 | 2024-01-19 | 2022-10-18 | 3.48 | 4.06 | 3.85 | 3.7 | 0.007 | 1.33 | 0.0 | 0.06 | 31.23 | 0.01 | 2.242 | 6.41 | 0.00 | 3.8 | 96.2 | 0.0 | -2.48 | 0.78 | 0.80 | 0.90 | 3.7 | 0.004 | 0.94 | 0.0 | 0.04 | 30.09 | 0.00 | 2.066 | 19.79 | 5.39 | 4.1 | 95.9 | 0.0 | 0.81 | 0.44 | 0.78 | 0.80 | 0.44 | 11926 | 751 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 7BY0 | 30239 | 2024-01-19 | 2020-04-21 | 4.5 | 5.50 | — | 4.5 | 0.008 | 0.97 | 0.0 | 0.05 | 31.23 | 0.01 | 1.950 | 11.25 | 0.15 | 3.1 | 96.9 | 0.0 | -3.59 | 0.92 | 0.87 | — | 4.5 | 0.005 | 0.70 | 0.0 | 0.04 | 30.63 | 0.00 | 2.096 | 22.45 | 0.00 | 5.3 | 94.7 | 0.0 | 0.01 | 1.28 | 0.92 | 0.86 | — | 12693 | 868 | 12 | 286 | 0 | 0 | 0 | logfile |
✔ | 8EUJ | 28614 | 2024-01-19 | 2022-10-18 | 3.36 | 4.07 | 3.84 | 3.7 | 0.006 | 1.22 | 0.0 | 0.06 | 30.77 | 0.01 | 2.233 | 5.43 | 0.00 | 2.6 | 97.4 | 0.0 | -2.60 | 0.71 | 0.76 | 0.82 | 3.7 | 0.005 | 1.12 | 2.0 | 0.05 | 29.87 | 0.01 | 2.047 | 22.47 | 6.51 | 4.0 | 96.0 | 0.0 | 0.40 | 0.98 | 0.71 | 0.78 | 0.62 | 11913 | 747 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 8D2X | 27153 | 2024-01-18 | 2022-05-30 | 3.4 | 3.58 | 3.42 | 3.5 | 0.012 | 1.29 | 0.0 | 0.06 | 30.61 | 0.01 | 2.260 | 6.47 | 0.34 | 6.7 | 93.2 | 0.1 | -1.77 | 0.70 | 0.78 | 3.65 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 13.76 | 0.00 | 2.222 | 9.52 | 2.87 | 6.2 | 93.8 | 0.0 | -0.51 | 0.60 | 0.72 | 0.80 | 3.15 | 6813 | 864 | 4 | 0 | 14 | 4 | 0 | logfile |
✔ | 7PFV | 13381 | 2024-01-20 | 2021-08-12 | 4.4 | 7.43 | — | 4.1 | 0.006 | 0.86 | 0.0 | 0.05 | 30.43 | 0.01 | 2.249 | 7.20 | 0.00 | 1.2 | 98.8 | 0.0 | 0.36 | 0.91 | 0.85 | — | 4.1 | 0.005 | 0.64 | 0.0 | 0.04 | 29.81 | 0.00 | 2.172 | 22.11 | 0.00 | 2.3 | 97.7 | 0.0 | 2.09 | 0.62 | 0.91 | 0.86 | — | 13880 | 843 | 11 | 354 | 0 | 0 | 0 | logfile |
✔ | 7PFF | 13374 | 2024-01-20 | 2021-08-11 | 4.3 | 7.61 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 30.35 | 0.01 | 2.286 | 8.26 | 0.00 | 1.6 | 98.4 | 0.0 | -0.07 | 0.90 | 0.79 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.04 | 30.99 | 0.00 | 2.198 | 27.46 | 0.00 | 3.7 | 96.3 | 0.0 | 0.66 | 1.83 | 0.89 | 0.81 | — | 12935 | 768 | 10 | 334 | 0 | 0 | 0 | logfile |
✔ | 7PFX | 13383 | 2024-01-20 | 2021-08-12 | 4.3 | 7.46 | — | 4.0 | 0.006 | 0.88 | 0.0 | 0.05 | 30.29 | 0.01 | 2.234 | 6.11 | 0.00 | 1.3 | 98.7 | 0.0 | 0.30 | 0.91 | 0.85 | — | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 30.16 | 0.00 | 2.097 | 20.30 | 0.00 | 2.5 | 97.5 | 0.0 | 1.99 | 1.56 | 0.91 | 0.86 | — | 13880 | 843 | 11 | 354 | 0 | 0 | 0 | logfile |
✔ | 7PEW | 13359 | 2024-01-20 | 2021-08-11 | 4.6 | 5.68 | — | 4.1 | 0.006 | 0.91 | 0.0 | 0.05 | 30.19 | 0.01 | 2.249 | 5.53 | 0.00 | 1.1 | 98.9 | 0.0 | -0.20 | 0.89 | 0.85 | — | 4.0 | 0.005 | 0.66 | 0.0 | 0.04 | 29.58 | 0.00 | 2.170 | 19.67 | 0.00 | 2.4 | 97.6 | 0.0 | 1.56 | 1.21 | 0.89 | 0.86 | — | 13304 | 768 | 10 | 352 | 0 | 0 | 0 | logfile |
✔ | 7K7G | 22698 | 2024-01-19 | 2020-09-22 | 4.2 | 4.83 | — | 4.1 | 0.008 | 1.03 | 0.0 | 0.06 | 29.99 | 0.01 | 2.251 | 7.76 | 0.00 | 4.1 | 95.9 | 0.0 | -1.83 | 0.87 | 0.81 | — | 4.1 | 0.005 | 0.68 | 0.0 | 0.04 | 28.44 | 0.00 | 2.108 | 18.60 | 0.00 | 4.8 | 95.2 | 0.0 | 0.31 | 1.74 | 0.87 | 0.81 | — | 11098 | 766 | 11 | 246 | 2 | 0 | 0 | logfile |
✔ | 7PFD | 13372 | 2024-01-20 | 2021-08-11 | 4.4 | 7.91 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 29.94 | 0.01 | 2.245 | 6.72 | 0.00 | 2.1 | 97.9 | 0.0 | -0.57 | 0.89 | 0.77 | — | 3.8 | 0.005 | 0.71 | 0.0 | 0.04 | 30.70 | 0.01 | 2.088 | 26.67 | 0.00 | 3.6 | 96.4 | 0.0 | 0.24 | 1.42 | 0.89 | 0.80 | — | 13675 | 843 | 11 | 344 | 0 | 0 | 0 | logfile |
✔ | 6X5i | 22051 | 2024-01-18 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.060 | 2.79 | 0.0 | 0.16 | 29.93 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.011 | 1.53 | 0.0 | 0.13 | 24.62 | 0.00 | 1.571 | 57.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.30 | 0.69 | 0.74 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 8JLB | 36391 | 2024-01-19 | 2023-06-02 | 2.36 | 2.12 | 2.25 | 2.5 | 0.004 | 0.69 | 0.0 | 0.04 | 29.91 | 0.01 | 1.988 | 3.26 | 0.16 | 1.5 | 98.5 | 0.0 | 0.69 | 0.76 | 0.85 | 3.59 | 1.7 | 0.005 | 0.61 | 0.0 | 0.04 | 28.22 | 0.00 | 2.112 | 4.02 | 1.95 | 1.4 | 98.6 | 0.0 | 2.73 | 1.53 | 0.77 | 0.86 | 3.39 | 11844 | 746 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 8GUK | 34275 | 2024-01-19 | 2022-09-12 | 2.51 | 3.12 | 2.54 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 29.88 | 0.00 | 2.202 | 10.18 | 3.15 | 1.7 | 98.3 | 0.0 | 2.28 | 0.85 | 0.85 | 3.27 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 29.74 | 0.00 | 2.216 | 9.44 | 4.73 | 2.1 | 97.9 | 0.0 | 2.52 | 0.21 | 0.83 | 0.86 | 2.96 | 12098 | 765 | 10 | 294 | 0 | 0 | 0 | logfile |
✔ | 8D2W | 27152 | 2024-01-18 | 2022-05-30 | 3.4 | 3.58 | 3.39 | 3.5 | 0.012 | 1.27 | 0.0 | 0.05 | 29.86 | 0.01 | 2.277 | 6.85 | 0.84 | 6.5 | 93.3 | 0.1 | -1.42 | 0.66 | 0.78 | 3.81 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 13.30 | 0.00 | 2.211 | 9.87 | 1.17 | 5.7 | 94.2 | 0.1 | -0.13 | 1.77 | 0.70 | 0.80 | 3.53 | 6858 | 864 | 6 | 0 | 16 | 5 | 0 | logfile |