The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8BA9 | 15942 | 2024-01-20 | 2022-10-11 | 3.7 | 3.96 | 3.79 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 15.68 | 0.01 | 1.191 | 9.39 | 0.10 | 3.9 | 96.1 | 0.0 | -0.84 | 0.83 | 0.84 | 1.69 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 15.36 | 0.00 | 1.171 | 9.01 | 1.08 | 2.9 | 97.0 | 0.0 | 1.41 | 0.98 | 0.84 | 0.85 | 1.27 | 120442 | 8008 | 35 | 0 | 42 | 0 | 60991 | logfile |
✔ | 7K5B | 22679 | 2024-01-20 | 2020-09-16 | 4.5 | 4.62 | — | 3.9 | 0.018 | 1.93 | 50.0 | 0.10 | 12.82 | 0.01 | 0.384 | 37.45 | 2.43 | 4.6 | 94.6 | 0.8 | -0.04 | 0.66 | 0.56 | — | 4.0 | 0.007 | 0.60 | 0.0 | 0.04 | 12.51 | 0.00 | 1.795 | 63.05 | 0.01 | 4.3 | 95.4 | 0.3 | 1.54 | 2.19 | 0.74 | 0.79 | — | 119573 | 15602 | 21 | 0 | 18 | 0 | 156 | logfile |
✔ | 7SN9 | 25215 | 2024-01-20 | 2021-10-27 | 3.5 | 4.01 | — | 3.8 | 0.002 | 0.52 | 0.0 | 0.04 | 13.55 | 0.00 | 2.135 | 9.66 | 0.20 | 5.5 | 94.5 | 0.0 | 2.56 | 0.59 | 0.85 | 2.04 | 3.8 | 0.004 | 0.57 | 0.0 | 0.04 | 15.06 | 0.00 | 2.137 | 10.29 | 2.10 | 7.1 | 92.9 | 0.0 | 2.21 | 0.38 | 0.59 | 0.87 | 1.92 | 119154 | 16548 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YLX | 10841 | 2024-01-20 | 2020-04-07 | 3.9 | 3.78 | 3.86 | 3.8 | 0.019 | 1.57 | 1.0 | 0.08 | 22.23 | 0.01 | 1.989 | 6.50 | 0.65 | 3.4 | 96.6 | 0.0 | -3.91 | 0.81 | 0.81 | 1.40 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 21.89 | 0.00 | 2.067 | 16.81 | 3.87 | 7.7 | 92.2 | 0.1 | -1.38 | 0.66 | 0.81 | 0.82 | 1.13 | 118882 | 7493 | 47 | 2757 | 0 | 0 | 0 | logfile |
✔ | 6YAM | 10761 | 2024-01-20 | 2020-03-12 | 3.6 | 3.47 | — | 3.5 | 0.021 | 2.06 | 55.0 | 0.12 | 19.49 | 0.02 | 0.634 | 17.64 | 3.01 | 10.8 | 85.2 | 4.0 | -4.49 | 0.39 | 0.52 | 0.80 | 3.4 | 0.005 | 0.91 | 3.0 | 0.04 | 20.67 | 0.01 | 1.764 | 14.75 | 4.61 | 11.2 | 88.4 | 0.4 | -2.38 | 1.56 | 0.46 | 0.65 | 1.11 | 118536 | 9811 | 51 | 1863 | 5 | 0 | 0 | logfile |
✔ | 6Q16 | 20556 | 2024-01-20 | 2019-08-02 | 4.1 | 4.11 | — | 4.1 | 0.007 | 1.05 | 0.0 | 0.06 | 14.24 | 0.01 | 2.214 | 3.99 | 0.67 | 3.6 | 96.4 | 0.0 | -5.13 | 0.85 | 0.83 | — | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 13.92 | 0.00 | 2.062 | 8.57 | 0.02 | 3.1 | 96.9 | 0.0 | 0.06 | 0.75 | 0.85 | 0.84 | — | 118198 | 14787 | 93 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZMW | 11302 | 2024-01-20 | 2020-07-04 | 3.7 | 3.79 | 3.57 | 3.7 | 0.008 | 1.25 | 0.0 | 0.06 | 20.52 | 0.02 | 1.291 | 7.20 | 2.46 | 6.4 | 93.3 | 0.2 | -2.63 | 0.70 | 0.65 | 1.27 | 3.7 | 0.006 | 0.83 | 0.0 | 0.04 | 20.95 | 0.01 | 1.015 | 17.43 | 3.46 | 7.1 | 92.9 | 0.0 | -1.57 | 1.37 | 0.74 | 0.74 | 1.45 | 118155 | 11116 | 62 | 1822 | 91 | 0 | 0 | logfile |
✔ | 8B9C | 15924 | 2024-01-20 | 2022-10-05 | 4.6 | 5.42 | 4.24 | 4.9 | 0.006 | 0.80 | 0.0 | 0.05 | 13.70 | 0.01 | 1.941 | 0.64 | 0.51 | 2.1 | 97.9 | 0.0 | 0.52 | 0.78 | 0.63 | — | 4.9 | 0.002 | 0.54 | 0.0 | 0.04 | 13.26 | 0.00 | 1.764 | 8.61 | 0.00 | 2.8 | 97.2 | 0.0 | 1.15 | 2.52 | 0.82 | 0.76 | — | 117985 | 7179 | 26 | 56 | 12 | 0 | 59018 | logfile |
✔ | 6ZP4 | 11335 | 2024-01-20 | 2020-07-08 | 2.9 | 2.98 | — | 2.6 | 0.007 | 0.92 | 0.0 | 0.05 | 20.11 | 0.01 | 2.079 | 4.90 | 0.33 | 5.3 | 94.7 | 0.1 | -3.82 | 0.84 | 0.81 | 2.89 | 2.7 | 0.007 | 0.75 | 0.0 | 0.04 | 20.43 | 0.00 | 1.862 | 10.94 | 2.43 | 5.6 | 94.4 | 0.0 | -0.48 | 0.45 | 0.89 | 0.89 | 2.57 | 117784 | 10408 | 59 | 1796 | 6 | 0 | 0 | logfile |
✔ | 8i9R | 35281 | 2024-01-19 | 2023-02-07 | 3.1 | 3.01 | 3.08 | 3.0 | 0.005 | 0.86 | 1.0 | 0.05 | 21.72 | 0.01 | 2.123 | 6.28 | 1.07 | 4.1 | 95.8 | 0.1 | -2.59 | 0.70 | 0.74 | 2.37 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 21.44 | 0.01 | 2.058 | 9.86 | 3.52 | 3.8 | 96.1 | 0.1 | 0.55 | 1.20 | 0.78 | 0.81 | 2.39 | 117417 | 8820 | 52 | 2395 | 3 | 0 | 0 | logfile |
✔ | 7SC9 | 25030 | 2024-01-20 | 2021-09-27 | 2.6 | 3.71 | 2.70 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 13.31 | 0.01 | 2.039 | 38.58 | 0.01 | 2.7 | 97.2 | 0.0 | 2.39 | 0.80 | 0.82 | 1.56 | 3.0 | 0.004 | 0.79 | 0.0 | 0.04 | 15.77 | 0.00 | 2.017 | 19.10 | 2.17 | 2.8 | 97.2 | 0.1 | 1.46 | 0.57 | 0.80 | 0.84 | 1.24 | 117262 | 14948 | 164 | 0 | 76 | 0 | 0 | logfile |
✔ | 3JCS | 6583 | 2024-01-19 | 2016-01-21 | 2.8 | 3.07 | — | 3.0 | 0.009 | 0.98 | 1.0 | 0.05 | 24.41 | 0.03 | 1.093 | 24.89 | 1.41 | 11.8 | 88.0 | 0.2 | -5.35 | 0.72 | 0.78 | 3.98 | 3.0 | 0.004 | 0.82 | 1.0 | 0.04 | 24.19 | 0.01 | 1.803 | 17.66 | 3.06 | 9.0 | 91.0 | 0.1 | -2.35 | 0.54 | 0.69 | 0.78 | 2.59 | 117257 | 5847 | 74 | 3420 | 109 | 144 | 0 | logfile |
✔ | 8ESR | 24422 | 2024-01-19 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 20.73 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 20.45 | 0.00 | 2.096 | 10.13 | 2.63 | 3.8 | 96.1 | 0.1 | 1.10 | 0.34 | 0.78 | 0.77 | 2.12 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |
✔ | 8FKR | 29254 | 2024-01-19 | 2022-12-21 | 2.89 | 3.25 | 3.05 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 19.58 | 0.00 | 1.940 | 2.04 | 0.01 | 1.2 | 98.8 | 0.0 | 1.71 | 0.75 | 0.81 | 3.01 | 3.1 | 0.005 | 0.60 | 0.0 | 0.04 | 20.02 | 0.00 | 1.920 | 6.31 | 1.63 | 2.4 | 97.6 | 0.0 | 1.31 | 0.45 | 0.77 | 0.85 | 2.89 | 116287 | 9101 | 63 | 1991 | 58 | 0 | 0 | logfile |
✔ | 7FiK | 31600 | 2024-01-19 | 2021-07-31 | 3.7 | 3.41 | — | 2.2 | 0.007 | 0.98 | 1.0 | 0.05 | 9.93 | 0.00 | 1.868 | 3.44 | 3.73 | 6.0 | 93.8 | 0.2 | -2.13 | 0.50 | 0.52 | 1.35 | 2.2 | 0.004 | 0.63 | 0.0 | 0.04 | 11.28 | 0.00 | 1.938 | 6.39 | 2.55 | 5.4 | 94.6 | 0.0 | 1.43 | 0.64 | 0.60 | 0.68 | 1.69 | 116163 | 19039 | 32 | 0 | 722 | 0 | 0 | logfile |
✔ | 7CF9 | 30343 | 2024-01-19 | 2020-06-24 | 4.7 | 4.24 | 5.21 | 4.0 | 0.006 | 1.24 | 0.0 | 0.06 | 16.01 | 0.01 | 1.538 | 5.47 | 1.67 | 6.2 | 93.7 | 0.1 | -4.86 | 0.79 | 0.68 | — | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 13.80 | 0.00 | 2.087 | 12.22 | 0.00 | 4.2 | 95.8 | 0.0 | -1.69 | 1.76 | 0.81 | 0.73 | — | 116104 | 14416 | 12 | 0 | 1820 | 0 | 0 | logfile |
✔ | 8E48 | 27883 | 2024-01-19 | 2022-08-17 | 2.27 | 2.95 | 2.47 | 2.8 | 0.005 | 0.52 | 0.0 | 0.03 | 21.95 | 0.02 | 1.808 | 1.21 | 0.53 | 4.6 | 95.4 | 0.0 | 0.36 | 0.69 | 0.84 | 3.07 | 2.7 | 0.004 | 0.71 | 0.0 | 0.04 | 21.84 | 0.01 | 1.778 | 1.79 | 1.91 | 6.5 | 93.4 | 0.1 | -0.57 | 0.71 | 0.71 | 0.90 | 5.13 | 115959 | 1179 | 11 | 3016 | 1 | 0 | 41918 | logfile |
✔ | 7K0S | 22615 | 2024-01-19 | 2020-09-05 | 4.5 | 4.73 | 4.68 | 4.6 | 0.003 | 0.64 | 2.0 | 0.04 | 14.04 | 0.00 | 2.069 | 9.69 | 0.95 | 7.8 | 92.0 | 0.2 | -0.12 | 0.80 | 0.73 | — | 4.6 | 0.043 | 3.17 | 236.0 | 0.13 | 17.13 | 0.02 | 1.379 | 136.31 | 0.01 | 44.3 | 52.3 | 3.4 | -7.53 | 2.27 | 0.84 | 0.82 | — | 115935 | 12896 | 8 | 0 | 3557 | 0 | 0 | logfile |
✔ | 8E47 | 27882 | 2024-01-19 | 2022-08-17 | 2.32 | 2.95 | 2.51 | 2.8 | 0.005 | 0.42 | 0.0 | 0.09 | 21.98 | 0.02 | 1.901 | 1.08 | 0.96 | 3.9 | 96.1 | 0.0 | 0.60 | 0.74 | 0.91 | 4.96 | 2.8 | 0.004 | 0.64 | 0.0 | 0.05 | 21.87 | 0.01 | 1.885 | 1.94 | 2.02 | 5.2 | 94.7 | 0.1 | -0.63 | 0.34 | 0.70 | 0.89 | 5.37 | 115917 | 1179 | 11 | 3016 | 1 | 0 | 41886 | logfile |
✔ | 7K0T | 22616 | 2024-01-19 | 2020-09-05 | 4.3 | 4.52 | 4.29 | 4.2 | 0.003 | 0.65 | 1.0 | 0.04 | 13.88 | 0.00 | 1.909 | 7.65 | 0.63 | 7.5 | 92.4 | 0.2 | -0.19 | 0.84 | 0.76 | — | 4.2 | 0.036 | 2.69 | 57.0 | 0.11 | 15.92 | 0.02 | 0.366 | 109.75 | 0.00 | 43.4 | 55.0 | 1.6 | -7.46 | 2.20 | 0.86 | 0.83 | — | 115905 | 12820 | 8 | 0 | 3608 | 0 | 0 | logfile |