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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q5A | 13830 | 2024-01-19 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.112 | 1.10 | 0.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 3.99 | 261.0 | 0.21 | 16.66 | 0.02 | 1.938 | 33.58 | 5.04 | 0.0 | 100.0 | 0.0 | 0.94 | 1.64 | 0.67 | 0.85 | 6.32 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 6RVV | 4443 | 2024-01-18 | 2019-06-03 | 3.7 | 3.95 | — | 3.9 | 0.006 | 0.60 | 0.0 | 0.05 | 13.27 | 0.00 | 2.245 | 2.48 | 0.00 | 2.0 | 98.0 | 0.0 | -2.44 | 0.78 | 0.82 | 2.75 | 3.9 | 0.006 | 0.66 | 0.0 | 0.05 | 18.04 | 0.00 | 2.045 | 10.85 | 6.11 | 0.8 | 99.2 | 0.0 | -0.90 | 1.04 | 0.79 | 0.83 | 3.07 | 110208 | 14520 | 384 | 0 | 120 | 0 | 0 | logfile |
✔ | 6RVW | 4444 | 2024-01-18 | 2019-06-03 | 3.7 | 3.98 | — | 3.9 | 0.008 | 0.66 | 0.0 | 0.05 | 14.12 | 0.00 | 2.263 | 1.75 | 0.00 | 2.0 | 98.0 | 0.0 | -2.37 | 0.79 | 0.82 | 2.87 | 3.9 | 0.004 | 0.65 | 0.0 | 0.05 | 18.45 | 0.00 | 2.137 | 10.60 | 8.65 | 1.0 | 99.0 | 0.0 | -1.39 | 3.19 | 0.80 | 0.84 | 3.21 | 110208 | 14520 | 384 | 0 | 120 | 0 | 0 | logfile |
✔ | 7o0V | 12680 | 2024-01-18 | 2021-03-27 | 2.5 | 2.50 | — | 2.4 | 0.018 | 4.38 | 0.0 | 0.06 | 22.57 | 0.01 | 2.117 | 1.81 | 0.31 | 1.2 | 98.8 | 0.0 | 1.63 | 0.82 | 0.86 | 5.41 | 2.4 | 0.005 | 1.79 | 0.0 | 0.04 | 19.69 | 0.00 | 2.046 | 7.76 | 1.79 | 1.0 | 99.0 | 0.0 | 3.63 | 0.49 | 0.84 | 0.89 | 4.35 | 55475 | 4947 | 238 | 0 | 317 | 489 | 0 | logfile |
✔ | 7o0X | 12682 | 2024-01-18 | 2021-03-28 | 2.44 | 2.39 | — | 2.3 | 0.018 | 4.34 | 0.0 | 0.06 | 22.65 | 0.01 | 2.099 | 1.65 | 0.23 | 1.4 | 98.6 | 0.0 | 1.33 | 0.82 | 0.86 | 5.55 | 2.3 | 0.003 | 1.71 | 0.0 | 0.04 | 19.10 | 0.00 | 2.050 | 6.89 | 1.55 | 0.9 | 99.1 | 0.0 | 4.00 | 0.47 | 0.83 | 0.88 | 4.19 | 56446 | 5072 | 237 | 0 | 316 | 521 | 0 | logfile |
✔ | 7o0U | 12679 | 2024-01-18 | 2021-03-27 | 2.35 | 2.42 | — | 2.3 | 0.018 | 4.37 | 0.0 | 0.06 | 22.61 | 0.01 | 2.121 | 1.73 | 0.41 | 1.2 | 98.8 | 0.0 | 1.39 | 0.83 | 0.86 | 5.52 | 2.3 | 0.003 | 1.69 | 0.0 | 0.04 | 19.21 | 0.00 | 1.829 | 7.26 | 1.25 | 0.9 | 99.1 | 0.0 | 4.13 | 0.50 | 0.84 | 0.89 | 4.26 | 55758 | 4972 | 236 | 0 | 320 | 491 | 0 | logfile |
✔ | 7o0W | 12681 | 2024-01-18 | 2021-03-27 | 2.47 | 2.42 | — | 2.3 | 0.018 | 4.34 | 0.0 | 0.06 | 22.62 | 0.01 | 2.010 | 1.98 | 0.28 | 1.4 | 98.6 | 0.0 | 1.25 | 0.82 | 0.86 | 5.37 | 2.3 | 0.003 | 1.66 | 0.0 | 0.03 | 19.01 | 0.00 | 1.960 | 7.48 | 0.98 | 0.9 | 99.1 | 0.0 | 4.01 | 0.49 | 0.83 | 0.88 | 3.93 | 56476 | 5076 | 236 | 0 | 320 | 406 | 0 | logfile |
✔ | 3JAU | 6366 | 2024-01-19 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.71 | 0.0 | 0.04 | 13.37 | 0.00 | 2.144 | 19.50 | 0.00 | 3.7 | 95.9 | 0.4 | -0.66 | 1.39 | 0.24 | 0.60 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CKB | 30384 | 2024-01-19 | 2020-07-16 | 3.24 | 3.29 | — | 3.2 | 0.008 | 0.88 | 0.0 | 0.05 | 16.33 | 0.01 | 2.160 | 6.96 | 1.05 | 4.0 | 96.0 | 0.0 | -0.87 | 0.85 | 0.88 | 2.17 | 3.2 | 0.004 | 0.69 | 0.0 | 0.04 | 17.02 | 0.00 | 1.537 | 7.62 | 3.80 | 2.1 | 97.9 | 0.0 | 0.01 | 0.24 | 0.84 | 0.89 | 2.72 | 114840 | 15840 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VEA | 31944 | 2024-01-18 | 2021-09-08 | 3.7 | 3.55 | — | 3.5 | 0.009 | 1.13 | 0.0 | 0.04 | 13.27 | 0.00 | 2.098 | 6.48 | 0.58 | 1.5 | 98.4 | 0.0 | 2.51 | 0.65 | 0.78 | 1.44 | 3.6 | 0.004 | 0.75 | 0.0 | 0.04 | 16.07 | 0.00 | 2.058 | 14.65 | 3.66 | 2.1 | 97.9 | 0.0 | 2.40 | 1.40 | 0.69 | 0.77 | 1.12 | 111542 | 15594 | 165 | 0 | 84 | 0 | 0 | logfile |
✔ | 7SC9 | 25030 | 2024-01-20 | 2021-09-27 | 2.6 | 3.71 | 2.70 | 3.0 | 0.005 | 0.63 | 0.0 | 0.04 | 13.31 | 0.01 | 2.039 | 38.58 | 0.01 | 2.7 | 97.2 | 0.0 | 2.39 | 0.80 | 0.82 | 1.56 | 3.0 | 0.004 | 0.79 | 0.0 | 0.04 | 15.77 | 0.00 | 2.017 | 19.10 | 2.17 | 2.8 | 97.2 | 0.1 | 1.46 | 0.57 | 0.80 | 0.84 | 1.24 | 117262 | 14948 | 164 | 0 | 76 | 0 | 0 | logfile |
✔ | 7SC7 | 25028 | 2024-01-17 | 2021-09-27 | 2.8 | 3.66 | — | 3.3 | 0.007 | 1.08 | 1.0 | 0.06 | 14.60 | 0.01 | 2.240 | 6.50 | 1.49 | 2.4 | 97.6 | 0.0 | -1.25 | 0.73 | 0.87 | 1.85 | 3.2 | 0.004 | 0.91 | 0.0 | 0.05 | 16.57 | 0.00 | 2.044 | 21.20 | 3.09 | 2.9 | 97.1 | 0.0 | 1.01 | 1.24 | 0.72 | 0.88 | 1.68 | 107930 | 13756 | 156 | 0 | 72 | 0 | 0 | logfile |
✔ | 7LQH | 23486 | 2024-01-19 | 2021-02-13 | 3.4 | 3.12 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.098 | 31.15 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.59 | 0.80 | 5.83 | 3.2 | 0.111 | 4.15 | 178.0 | 0.30 | 24.80 | 0.02 | 1.776 | 108.91 | 21.76 | 35.4 | 64.6 | 0.0 | -7.62 | 3.47 | 0.65 | 0.87 | 3.27 | 12096 | 1152 | 144 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQG | 23485 | 2024-01-19 | 2021-02-13 | 3.4 | 3.13 | — | 3.3 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 1.842 | 31.02 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.61 | 0.81 | 5.57 | 3.2 | 0.110 | 4.32 | 163.0 | 0.30 | 24.12 | 0.02 | 1.769 | 115.03 | 20.14 | 35.2 | 64.8 | 0.0 | -8.00 | 1.14 | 0.67 | 0.87 | 3.69 | 12096 | 1152 | 144 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UH4 | 42246 | 2024-01-18 | 2023-10-06 | 3.72 | 4.54 | 4.34 | 4.4 | 0.008 | 0.78 | 0.0 | 0.05 | 15.20 | 0.01 | 2.146 | 13.85 | 0.00 | 2.4 | 97.2 | 0.5 | -2.44 | 0.80 | 0.84 | 3.98 | 4.4 | 0.005 | 0.92 | 1.0 | 0.04 | 17.87 | 0.00 | 1.719 | 16.02 | 3.97 | 4.2 | 95.8 | 0.0 | -2.00 | 0.64 | 0.76 | 0.79 | 3.44 | 110100 | 12780 | 120 | 540 | 0 | 0 | 0 | logfile |
✔ | 6X66 | 22071 | 2024-01-18 | 2020-05-27 | 4.2 | 6.75 | — | 8.4 | 0.016 | 1.73 | 27.0 | 0.08 | 14.04 | 0.01 | 2.162 | 21.79 | 0.38 | 12.3 | 87.7 | 0.0 | -3.77 | 0.72 | 0.45 | — | 4.2 | 0.005 | 0.90 | 0.0 | 0.05 | 12.91 | 0.01 | 1.987 | 32.05 | 0.00 | 9.4 | 90.6 | 0.1 | -2.61 | 2.77 | 0.77 | 0.73 | — | 109070 | 15548 | 117 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X62 | 22068 | 2024-01-18 | 2020-05-27 | 3.5 | 3.69 | — | 3.7 | 0.014 | 1.87 | 45.0 | 0.09 | 15.63 | 0.01 | 2.185 | 6.98 | 4.90 | 8.5 | 91.5 | 0.0 | -3.87 | 0.65 | 0.64 | 0.52 | 3.6 | 0.004 | 0.85 | 0.0 | 0.05 | 16.49 | 0.00 | 2.004 | 20.31 | 5.40 | 7.1 | 92.9 | 0.0 | -1.67 | 1.28 | 0.74 | 0.83 | 1.45 | 109070 | 15548 | 117 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SC8 | 25029 | 2024-01-18 | 2021-09-27 | 2.1 | 2.19 | 2.13 | 1.9 | 0.008 | 1.12 | 10.0 | 0.07 | 14.65 | 0.01 | 2.102 | 5.20 | 0.38 | 1.0 | 99.0 | 0.0 | 2.13 | 0.82 | 0.79 | 4.35 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.89 | 0.00 | 2.068 | 8.83 | 1.29 | 1.1 | 98.9 | 0.0 | 2.98 | 0.36 | 0.86 | 0.86 | 4.14 | 56784 | 6836 | 116 | 0 | 54 | 2672 | 0 | logfile |
✔ | 7SCA | 25031 | 2024-01-18 | 2021-09-27 | 2.1 | 2.23 | 2.15 | 2.2 | 0.011 | 1.14 | 7.0 | 0.07 | 14.95 | 0.01 | 2.057 | 5.44 | 0.78 | 1.0 | 99.0 | 0.0 | 2.17 | 0.79 | 0.85 | 5.74 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.11 | 0.00 | 2.149 | 8.14 | 1.25 | 1.0 | 99.0 | 0.0 | 2.73 | 1.09 | 0.79 | 0.85 | 5.36 | 55437 | 6836 | 116 | 0 | 54 | 1325 | 0 | logfile |
✔ | 7RCV | 24407 | 2024-01-17 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.38 | 0.0 | 0.11 | 22.23 | 0.01 | 1.915 | 13.94 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.005 | 0.86 | 0.0 | 0.05 | 18.39 | 0.01 | 2.031 | 12.38 | 1.91 | 2.9 | 97.1 | 0.0 | 0.64 | 0.35 | 0.81 | 0.84 | 5.28 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |