The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NTM | 12591 | 2024-01-19 | 2021-03-10 | 2.86 | 3.19 | 2.97 | 2.8 | 0.013 | 1.61 | 7.0 | 0.10 | 15.61 | 0.00 | 1.962 | 17.08 | 1.77 | 6.2 | 93.8 | 0.0 | -3.56 | 0.98 | 0.97 | 4.63 | 2.8 | 0.004 | 0.56 | 0.0 | 0.04 | 15.92 | 0.00 | 2.064 | 3.45 | 0.75 | 2.5 | 97.5 | 0.0 | -0.02 | 0.92 | 0.99 | 0.98 | 5.26 | 10336 | 1388 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7YC8 | 33736 | 2024-01-18 | 2022-07-01 | 4.14 | 7.25 | 4.31 | 4.1 | 0.002 | 0.51 | 0.0 | 0.02 | 23.89 | 0.00 | 2.079 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.96 | 0.87 | — | 4.1 | 0.006 | 0.82 | 0.0 | 0.04 | 26.81 | 0.01 | 1.979 | 69.18 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.26 | 0.97 | 0.89 | — | 8335 | 0 | 1 | 388 | 1 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2024-01-17 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 22.03 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.90 | 0.0 | 0.04 | 27.59 | 0.01 | 1.795 | 82.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.58 | 0.96 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 7NZM | 12665 | 2024-01-18 | 2021-03-24 | 3.96 | 6.56 | 4.22 | 4.2 | 0.007 | 1.12 | 0.0 | 0.06 | 14.32 | 0.01 | 1.774 | 11.10 | 0.00 | 3.8 | 96.2 | 0.0 | -1.56 | 0.77 | 0.51 | -0.04 | 4.3 | 0.005 | 1.03 | 0.0 | 0.04 | 15.04 | 0.00 | 2.012 | 21.70 | 0.52 | 2.9 | 97.1 | 0.0 | 0.39 | 1.50 | 0.95 | 0.84 | 0.23 | 9109 | 1157 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8A1R | 15084 | 2024-01-18 | 2022-06-01 | 3.6 | 5.63 | 3.62 | 3.4 | 0.011 | 0.86 | 0.0 | 0.06 | 16.56 | 0.00 | 2.097 | 11.72 | 0.00 | 5.2 | 94.8 | 0.0 | -0.06 | 0.91 | 0.75 | -0.28 | 3.5 | 0.003 | 0.69 | 0.0 | 0.05 | 16.41 | 0.00 | 2.166 | 19.75 | 1.12 | 6.4 | 93.6 | 0.0 | -0.56 | 0.61 | 0.95 | 0.86 | -0.05 | 9286 | 1186 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7YCi | 33740 | 2024-01-18 | 2022-07-01 | 2.98 | 4.31 | 3.09 | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 23.12 | 0.00 | 1.521 | 15.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.84 | — | 3.3 | 0.005 | 0.62 | 0.0 | 0.03 | 23.51 | 0.00 | 1.865 | 24.04 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.95 | 0.89 | — | 8474 | 0 | 2 | 395 | 4 | 0 | 0 | logfile |
✔ | 7YCG | 33738 | 2024-01-18 | 2022-07-01 | 3.18 | 4.71 | 3.37 | 3.5 | 0.002 | 0.50 | 0.0 | 0.03 | 23.15 | 0.00 | 1.893 | 15.83 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.84 | — | 3.5 | 0.007 | 0.66 | 0.0 | 0.04 | 23.33 | 0.00 | 1.854 | 32.51 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.31 | 0.95 | 0.90 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 8BLQ | 16113 | 2024-01-18 | 2022-11-10 | 3.97 | 5.74 | 4.01 | 3.9 | 0.002 | 0.55 | 0.0 | 0.04 | 12.20 | 0.00 | 2.201 | 11.99 | 0.10 | 4.9 | 95.1 | 0.0 | -3.81 | 0.92 | 0.71 | 1.20 | 3.9 | 0.004 | 0.65 | 0.0 | 0.04 | 13.97 | 0.00 | 2.075 | 24.32 | 1.07 | 6.9 | 93.1 | 0.0 | -1.76 | 1.43 | 0.94 | 0.80 | 1.06 | 9210 | 1220 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TJU | 41311 | 2024-01-18 | 2023-07-24 | 3.46 | 4.75 | 3.48 | 3.4 | 0.006 | 0.67 | 0.0 | 0.04 | 24.42 | 0.01 | 1.874 | 27.33 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.86 | — | 3.4 | 0.008 | 0.70 | 0.0 | 0.04 | 23.90 | 0.01 | 1.792 | 28.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.43 | 0.94 | 0.91 | — | 8771 | 0 | 2 | 409 | 27 | 0 | 0 | logfile |
✔ | 7PMF | 13531 | 2024-01-19 | 2021-09-02 | 3.4 | 4.29 | 3.46 | 3.3 | 0.010 | 1.00 | 1.0 | 0.06 | 15.34 | 0.01 | 1.313 | 3.78 | 0.09 | 0.2 | 99.8 | 0.0 | -1.44 | 0.91 | 0.83 | 3.07 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 15.11 | 0.00 | 1.944 | 7.01 | 0.65 | 1.6 | 98.4 | 0.0 | 1.78 | 1.29 | 0.94 | 0.88 | 2.36 | 10125 | 1256 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7PMG | 13532 | 2024-01-19 | 2021-09-02 | 3.3 | 4.20 | 3.27 | 3.2 | 0.014 | 1.18 | 2.0 | 0.07 | 15.70 | 0.01 | 1.308 | 4.64 | 0.09 | 0.2 | 99.8 | 0.0 | -1.37 | 0.92 | 0.85 | 3.45 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 15.46 | 0.00 | 1.972 | 6.13 | 0.55 | 1.5 | 98.5 | 0.0 | 1.70 | 1.27 | 0.94 | 0.89 | 2.87 | 10189 | 1264 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PEP | 17634 | 2024-01-20 | 2023-06-14 | 3.33 | 4.07 | 3.32 | 3.4 | 0.004 | 0.72 | 0.0 | 0.05 | 28.76 | 0.01 | 2.092 | 9.54 | 0.13 | 1.9 | 98.1 | 0.0 | 0.85 | 0.92 | 0.87 | 1.55 | 3.4 | 0.004 | 0.60 | 0.0 | 0.03 | 27.38 | 0.00 | 2.101 | 9.70 | 1.01 | 2.8 | 97.2 | 0.0 | 1.75 | 2.44 | 0.94 | 0.91 | 1.55 | 13492 | 939 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7PML | 13538 | 2024-01-19 | 2021-09-02 | 3.3 | 4.18 | 3.26 | 3.2 | 0.005 | 0.86 | 1.0 | 0.05 | 15.93 | 0.01 | 1.315 | 3.95 | 0.09 | 0.2 | 99.8 | 0.0 | -1.35 | 0.91 | 0.83 | 2.88 | 3.3 | 0.002 | 0.62 | 0.0 | 0.04 | 15.91 | 0.00 | 2.004 | 5.93 | 0.28 | 1.1 | 98.9 | 0.0 | 1.97 | 0.70 | 0.94 | 0.88 | 2.33 | 10189 | 1264 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7BZW | 30261 | 2024-01-18 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.33 | 0.01 | 2.096 | 25.68 | 0.00 | 15.2 | 84.8 | 0.0 | -3.70 | 1.72 | 0.94 | 0.87 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PMH | 13533 | 2024-01-19 | 2021-09-02 | 3.4 | 4.28 | 3.26 | 3.3 | 0.009 | 1.01 | 2.0 | 0.06 | 15.50 | 0.01 | 1.310 | 4.17 | 0.09 | 0.2 | 99.8 | 0.0 | -1.51 | 0.91 | 0.83 | 3.35 | 3.3 | 0.002 | 0.61 | 0.0 | 0.04 | 15.67 | 0.00 | 2.012 | 6.89 | 0.37 | 1.5 | 98.5 | 0.0 | 1.79 | 0.64 | 0.94 | 0.88 | 2.74 | 10154 | 1259 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PEo | 17633 | 2024-01-19 | 2023-06-14 | 2.69 | 3.21 | 2.84 | 2.7 | 0.005 | 0.77 | 0.0 | 0.05 | 29.82 | 0.01 | 2.201 | 8.09 | 0.14 | 1.9 | 98.1 | 0.0 | 0.99 | 0.92 | 0.88 | 2.79 | 2.8 | 0.004 | 0.63 | 0.0 | 0.04 | 28.15 | 0.00 | 2.126 | 6.84 | 1.40 | 2.4 | 97.6 | 0.0 | 1.81 | 1.39 | 0.94 | 0.92 | 2.91 | 12835 | 853 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7YCH | 33739 | 2024-01-18 | 2022-07-01 | 3.09 | 4.46 | 3.30 | 3.5 | 0.002 | 0.48 | 0.0 | 0.02 | 22.85 | 0.00 | 1.420 | 15.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.84 | — | 3.6 | 0.007 | 0.67 | 0.0 | 0.04 | 23.21 | 0.00 | 1.809 | 31.82 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.46 | 0.94 | 0.88 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 7PMi | 13535 | 2024-01-19 | 2021-09-02 | 3.3 | 4.20 | 3.27 | 3.2 | 0.014 | 1.17 | 2.0 | 0.07 | 15.80 | 0.01 | 1.306 | 5.04 | 0.09 | 0.2 | 99.8 | 0.0 | -1.50 | 0.92 | 0.84 | 2.97 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 15.73 | 0.00 | 2.017 | 7.56 | 0.46 | 1.5 | 98.5 | 0.0 | 1.35 | 0.66 | 0.94 | 0.88 | 2.56 | 10189 | 1264 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 8G12 | 29659 | 2024-01-19 | 2023-02-01 | 2.17 | 3.50 | 2.16 | 2.8 | 0.006 | 0.87 | 0.0 | 0.05 | 14.96 | 0.01 | 2.394 | 5.72 | 0.38 | 4.3 | 95.7 | 0.0 | -1.26 | 0.93 | 0.93 | 4.11 | 2.8 | 0.002 | 0.52 | 0.0 | 0.04 | 15.25 | 0.01 | 2.321 | 2.88 | 0.48 | 3.9 | 96.1 | 0.0 | 0.74 | 0.30 | 0.94 | 0.94 | 4.77 | 9980 | 1336 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZAG | 14579 | 2024-01-19 | 2022-03-22 | 2.77 | 3.44 | 2.77 | 3.0 | 0.017 | 0.71 | 1.0 | 0.04 | 20.43 | 0.06 | 1.409 | 4.02 | 0.74 | 3.3 | 96.7 | 0.0 | 0.45 | 0.93 | 0.91 | 4.29 | 3.0 | 0.005 | 1.19 | 0.0 | 0.04 | 21.46 | 0.01 | 1.848 | 6.98 | 1.42 | 3.3 | 96.7 | 0.0 | 0.56 | 0.94 | 0.93 | 0.94 | 3.86 | 65678 | 3824 | 57 | 1596 | 68 | 379 | 0 | logfile |