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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZC6 | 14622 | 2024-01-19 | 2022-03-25 | 4.27 | 4.35 | 4.17 | 4.3 | 0.014 | 1.95 | 12.0 | 2.55 | 19.30 | 0.01 | 2.098 | 12.11 | 10.79 | 6.1 | 93.1 | 0.8 | -1.59 | 0.66 | 0.74 | — | 4.3 | 0.020 | 3.91 | 0.0 | 0.76 | 14.88 | 0.00 | 1.106 | 12.74 | 0.08 | 4.9 | 95.1 | 0.0 | -1.15 | 0.73 | 0.68 | 0.78 | — | 11428 | 1513 | 11 | 0 | 12 | 0 | 0 | logfile |
✔ | 8oKR | 16930 | 2024-01-17 | 2023-03-29 | 2.86 | 3.36 | 2.66 | 3.4 | 0.007 | 1.56 | 0.0 | 0.09 | 22.91 | 0.01 | 1.489 | 4.96 | 0.00 | 0.0 | 100.0 | 0.0 | -4.51 | 0.55 | 0.67 | 7.31 | 3.4 | 0.190 | 6.52 | 60.0 | 0.43 | 29.21 | 0.04 | 1.639 | 169.69 | 15.48 | 50.0 | 38.3 | 11.7 | -7.72 | 2.21 | 0.63 | 0.89 | 1.62 | 1608 | 168 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8B3A | 15824 | 2024-01-17 | 2022-09-16 | 3.8 | 3.66 | 2.91 | 4.1 | 0.122 | 1.89 | 0.0 | 0.10 | 27.06 | 0.09 | 2.613 | 1.89 | 0.00 | 0.0 | 100.0 | 0.0 | -4.71 | 0.55 | 0.64 | 5.18 | 4.1 | 0.079 | 6.01 | 25.0 | 0.42 | 24.42 | 0.05 | 1.656 | 304.50 | 59.05 | 52.0 | 4.7 | 43.3 | -10.74 | 2.55 | 0.44 | 0.59 | 3.08 | 2010 | 210 | 30 | 0 | 60 | 0 | 0 | logfile |
✔ | 7LQF | 23484 | 2024-01-17 | 2021-02-13 | 3.8 | 3.13 | — | 4.0 | 0.016 | 1.46 | 0.0 | 0.03 | 18.37 | 0.00 | 2.258 | 22.81 | 2.08 | 0.0 | 100.0 | 0.0 | -4.77 | 0.59 | 0.78 | 4.63 | 3.2 | 0.155 | 6.28 | 251.0 | 0.42 | 27.36 | 0.03 | 1.648 | 200.72 | 26.56 | 66.8 | 29.3 | 3.9 | -9.78 | 2.03 | 0.69 | 0.87 | 2.76 | 5376 | 512 | 64 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQE | 23483 | 2024-01-17 | 2021-02-13 | 3.4 | 3.06 | — | 3.4 | 0.016 | 1.42 | 0.0 | 0.04 | 20.72 | 0.00 | 2.423 | 23.27 | 14.58 | 0.0 | 100.0 | 0.0 | -5.94 | 0.57 | 0.80 | 5.06 | 3.2 | 0.151 | 5.08 | 246.0 | 0.39 | 26.91 | 0.02 | 1.698 | 131.43 | 25.00 | 60.8 | 38.5 | 0.7 | -8.74 | 1.57 | 0.65 | 0.90 | 1.60 | 6048 | 576 | 72 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKZ | 14058 | 2024-01-17 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 2.7 | 0.011 | 3.64 | 0.0 | 0.38 | 18.80 | 0.01 | 2.113 | 13.00 | 1.01 | 2.5 | 97.5 | 0.0 | -1.04 | 5.47 | 0.34 | 0.64 | 6.35 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 7T6E | 25714 | 2024-01-17 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 125.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 134.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2024-01-17 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 6ZKV | 11263 | 2024-01-19 | 2020-06-30 | 2.9 | 2.66 | — | 2.9 | 0.007 | 0.97 | 0.0 | 1.04 | 12.09 | 0.01 | 2.225 | 4.97 | 0.06 | 3.6 | 96.4 | 0.0 | -2.96 | 0.59 | 0.80 | 3.53 | 2.9 | 0.008 | 1.62 | 0.0 | 0.32 | 16.57 | 0.00 | 2.095 | 12.29 | 2.62 | 3.6 | 96.4 | 0.0 | 0.36 | 1.62 | 0.61 | 0.83 | 2.72 | 65224 | 7932 | 66 | 0 | 36 | 0 | 0 | logfile |
✔ | 6ZKM | 11254 | 2024-01-20 | 2020-06-30 | 2.8 | 2.40 | — | 2.6 | 0.008 | 1.03 | 0.0 | 1.04 | 12.63 | 0.01 | 2.229 | 5.03 | 0.10 | 3.5 | 96.5 | 0.0 | -2.74 | 0.65 | 0.82 | 4.06 | 2.7 | 0.009 | 1.63 | 0.0 | 0.32 | 16.82 | 0.01 | 2.041 | 12.41 | 2.98 | 3.6 | 96.4 | 0.0 | 0.37 | 1.24 | 0.66 | 0.84 | 3.38 | 65955 | 8002 | 67 | 0 | 41 | 0 | 0 | logfile |
✔ | 8C2S | 16398 | 2024-01-19 | 2022-12-22 | 3.9 | 3.23 | 3.56 | 3.4 | 0.008 | 0.85 | 0.0 | 1.05 | 18.04 | 0.01 | 1.838 | 10.41 | 0.18 | 6.1 | 93.8 | 0.1 | 0.35 | 0.63 | 0.81 | 2.15 | 3.4 | 0.009 | 1.64 | 0.0 | 0.32 | 17.68 | 0.00 | 1.903 | 10.44 | 2.76 | 3.7 | 96.3 | 0.0 | 0.89 | 0.48 | 0.64 | 0.82 | 1.82 | 63667 | 7799 | 62 | 0 | 31 | 0 | 0 | logfile |
✔ | 8CA5 | 16518 | 2024-01-19 | 2023-01-24 | 3.9 | 3.32 | 3.60 | 3.3 | 0.006 | 0.82 | 0.0 | 1.05 | 17.46 | 0.00 | 1.966 | 10.20 | 0.29 | 5.3 | 94.5 | 0.1 | 0.84 | 0.68 | 0.81 | 2.15 | 3.4 | 0.009 | 1.67 | 2.0 | 0.32 | 17.47 | 0.01 | 2.056 | 12.00 | 2.86 | 4.1 | 95.8 | 0.0 | 0.83 | 0.45 | 0.69 | 0.82 | 1.88 | 64198 | 7851 | 62 | 0 | 31 | 0 | 0 | logfile |
✔ | 8CA3 | 16516 | 2024-01-19 | 2023-01-24 | 3.9 | 2.99 | 3.05 | 3.1 | 0.006 | 0.75 | 0.0 | 1.06 | 15.81 | 0.00 | 1.812 | 6.28 | 0.06 | 4.8 | 95.1 | 0.0 | 0.98 | 0.66 | 0.80 | 3.03 | 3.0 | 0.008 | 1.60 | 0.0 | 0.32 | 15.93 | 0.00 | 2.048 | 7.17 | 1.78 | 2.7 | 97.3 | 0.0 | 1.35 | 0.35 | 0.68 | 0.81 | 2.52 | 63712 | 7799 | 63 | 0 | 32 | 0 | 0 | logfile |
✔ | 6ZKN | 11255 | 2024-01-20 | 2020-06-30 | 2.9 | 2.40 | — | 2.6 | 0.008 | 1.03 | 0.0 | 1.04 | 12.63 | 0.01 | 2.229 | 5.03 | 0.10 | 3.5 | 96.5 | 0.0 | -2.74 | 0.65 | 0.82 | 4.06 | 2.7 | 0.008 | 1.61 | 0.0 | 0.31 | 16.68 | 0.00 | 2.071 | 11.71 | 2.77 | 3.2 | 96.8 | 0.0 | 0.57 | 1.24 | 0.66 | 0.84 | 3.23 | 65955 | 8002 | 67 | 0 | 41 | 0 | 0 | logfile |
✔ | 6G72 | 4356 | 2024-01-19 | 2018-04-04 | 3.9 | 4.03 | 4.01 | 4.0 | 0.011 | 1.10 | 0.0 | 1.03 | 11.76 | 0.01 | 1.475 | 9.32 | 0.23 | 16.8 | 82.7 | 0.4 | -5.65 | 0.65 | 0.78 | 1.98 | 4.0 | 0.009 | 1.73 | 0.0 | 0.31 | 16.27 | 0.01 | 1.952 | 19.26 | 3.38 | 12.4 | 87.5 | 0.1 | -2.38 | 1.63 | 0.66 | 0.81 | 1.44 | 64924 | 8071 | 55 | 0 | 14 | 0 | 0 | logfile |
✔ | 6QC5 | 4497 | 2024-01-19 | 2018-12-26 | 4.3 | 4.44 | 4.37 | 4.3 | 0.009 | 1.29 | 0.0 | 1.03 | 11.86 | 0.01 | 2.162 | 8.03 | 0.72 | 12.3 | 87.5 | 0.2 | -4.12 | 0.64 | 0.77 | — | 4.3 | 0.008 | 1.70 | 0.0 | 0.31 | 13.57 | 0.01 | 1.244 | 18.02 | 0.07 | 10.0 | 90.0 | 0.0 | -1.31 | 1.02 | 0.65 | 0.77 | — | 65691 | 8136 | 57 | 0 | 16 | 0 | 0 | logfile |
✔ | 6QC6 | 4498 | 2024-01-19 | 2018-12-27 | 4.1 | 4.24 | 4.40 | 4.2 | 0.006 | 1.19 | 0.0 | 1.03 | 11.59 | 0.01 | 2.082 | 6.24 | 0.55 | 10.3 | 89.6 | 0.1 | -4.07 | 0.65 | 0.77 | — | 4.1 | 0.009 | 1.71 | 0.0 | 0.31 | 13.65 | 0.01 | 2.081 | 17.59 | 0.01 | 10.2 | 89.8 | 0.0 | -1.35 | 1.04 | 0.66 | 0.80 | — | 65344 | 8085 | 58 | 0 | 18 | 0 | 0 | logfile |
✔ | 6QC8 | 4500 | 2024-01-19 | 2018-12-27 | 4.2 | 4.28 | 4.19 | 4.2 | 0.008 | 1.26 | 0.0 | 1.03 | 11.93 | 0.01 | 2.069 | 7.62 | 0.57 | 11.9 | 88.0 | 0.1 | -4.06 | 0.63 | 0.76 | — | 4.2 | 0.009 | 1.71 | 0.0 | 0.31 | 13.70 | 0.01 | 2.031 | 18.22 | 0.01 | 10.7 | 89.3 | 0.0 | -1.41 | 1.73 | 0.64 | 0.78 | — | 65394 | 8092 | 58 | 0 | 18 | 0 | 0 | logfile |
✔ | 7QJX | 14025 | 2024-01-20 | 2021-12-17 | 2.99 | 3.05 | 3.00 | 2.8 | 0.014 | 2.56 | 5.0 | 0.24 | 13.83 | 0.02 | 2.532 | 0.29 | 0.00 | 1.7 | 98.2 | 0.1 | -2.52 | 0.35 | 0.70 | 3.48 | 2.8 | 0.005 | 1.22 | 0.0 | 0.31 | 16.29 | 0.01 | 2.142 | 3.76 | 1.92 | 6.7 | 93.3 | 0.0 | -3.71 | 2.46 | 0.36 | 0.78 | 3.40 | 13860 | 900 | 12 | 0 | 0 | 0 | 7056 | logfile |
✔ | 5LNK | 4093 | 2024-01-19 | 2016-08-04 | 3.9 | 3.95 | — | 3.9 | 0.007 | 1.05 | 0.0 | 1.04 | 11.21 | 0.01 | 2.038 | 25.44 | 0.32 | 12.6 | 86.9 | 0.5 | -4.85 | 0.76 | 0.79 | 1.96 | 3.9 | 0.009 | 1.78 | 0.0 | 0.31 | 16.89 | 0.01 | 2.030 | 22.77 | 5.30 | 11.5 | 88.2 | 0.3 | -1.57 | 0.89 | 0.77 | 0.80 | 0.92 | 63760 | 7918 | 61 | 0 | 144 | 0 | 0 | logfile |