The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6BHU | 7099 | 2023-11-15 | 2017-10-31 | 3.14 | 3.58 | 3.62 | 3.7 | 0.008 | 1.22 | 0.0 | 0.06 | 12.26 | 0.00 | 1.915 | 0.69 | 0.00 | 3.7 | 96.3 | 0.0 | -1.76 | 0.48 | 0.69 | 2.60 | 3.7 | 0.003 | 0.57 | 0.0 | 0.04 | 15.20 | 0.00 | 1.978 | 5.37 | 0.47 | 2.0 | 98.0 | 0.0 | 1.92 | 0.71 | 0.58 | 0.83 | 1.65 | 10273 | 1208 | 1 | 0 | 127 | 0 | 0 | logfile |
✔ | 5U4J | 8506 | 2023-11-15 | 2016-12-04 | 3.7 | 3.88 | 3.59 | 3.9 | 0.009 | 1.21 | 2.0 | 0.10 | 17.29 | 0.02 | 1.797 | 3.02 | 2.82 | 5.7 | 93.9 | 0.4 | -2.95 | 0.42 | 0.80 | 2.24 | 3.8 | 0.005 | 0.81 | 0.0 | 0.04 | 16.87 | 0.01 | 2.112 | 17.70 | 0.94 | 5.5 | 94.3 | 0.2 | -2.18 | 0.68 | 0.44 | 0.79 | 1.82 | 11360 | 524 | 10 | 339 | 0 | 0 | 0 | logfile |
✔ | 7CAF | 30329 | 2023-11-15 | 2020-06-08 | 3.3 | 3.62 | — | 3.5 | 0.006 | 0.77 | 0.0 | 0.11 | 14.63 | 0.01 | 1.987 | 11.97 | 0.43 | 9.0 | 90.7 | 0.3 | -4.70 | 0.72 | 0.83 | 1.89 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 16.11 | 0.00 | 2.128 | 10.04 | 0.29 | 6.8 | 93.1 | 0.1 | -1.25 | 0.47 | 0.65 | 0.83 | 1.22 | 13414 | 1767 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XL5 | 22234 | 2023-11-21 | 2020-06-28 | 2.5 | 3.07 | — | 3.0 | 0.010 | 0.93 | 0.0 | 0.06 | 16.90 | 0.01 | 2.093 | 7.55 | 0.00 | 0.8 | 99.2 | 0.0 | -2.54 | 0.74 | 0.86 | 3.74 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 18.51 | 0.00 | 2.015 | 9.07 | 1.54 | 2.4 | 97.6 | 0.0 | 0.40 | 1.03 | 0.70 | 0.85 | 3.15 | 35828 | 4220 | 20 | 108 | 10 | 42 | 0 | logfile |
✔ | 7KJV | 22899 | 2023-11-14 | 2020-10-26 | 2.8 | 3.04 | — | 3.0 | 0.005 | 0.58 | 0.0 | 0.04 | 14.14 | 0.01 | 2.227 | 6.27 | 0.26 | 3.3 | 96.7 | 0.0 | 0.67 | 0.71 | 0.82 | 3.76 | 3.0 | 0.004 | 0.55 | 0.0 | 0.04 | 15.70 | 0.00 | 2.249 | 6.64 | 1.18 | 3.9 | 96.1 | 0.0 | 0.59 | 0.46 | 0.71 | 0.84 | 3.85 | 8361 | 941 | 5 | 44 | 2 | 0 | 0 | logfile |
✔ | 7ZWC | 14996 | 2023-11-16 | 2022-05-19 | 3.2 | 3.57 | 3.12 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 18.39 | 0.00 | 2.067 | 7.82 | 0.00 | 3.7 | 96.3 | 0.0 | 1.08 | 0.74 | 0.80 | 2.49 | 3.4 | 0.003 | 0.70 | 0.0 | 0.04 | 20.00 | 0.00 | 2.144 | 11.55 | 0.15 | 4.3 | 95.7 | 0.0 | 0.52 | 0.51 | 0.77 | 0.85 | 2.65 | 13944 | 1500 | 11 | 83 | 2 | 0 | 0 | logfile |
✔ | 6VQV | 21358 | 2023-11-18 | 2020-02-06 | 2.57 | 2.88 | 2.74 | 2.8 | 0.010 | 1.12 | 3.0 | 0.06 | 12.89 | 0.01 | 2.253 | 5.11 | 1.16 | 8.6 | 91.3 | 0.1 | -3.98 | 0.68 | 0.80 | 3.74 | 2.9 | 0.007 | 0.81 | 0.0 | 0.05 | 15.90 | 0.01 | 2.097 | 10.67 | 2.31 | 10.0 | 90.0 | 0.0 | -1.93 | 1.08 | 0.69 | 0.82 | 2.90 | 24676 | 2990 | 12 | 60 | 0 | 0 | 0 | logfile |
✔ | 7K0i | 22598 | 2023-11-16 | 2020-09-04 | 3.3 | 3.75 | — | 3.7 | 0.005 | 0.64 | 0.0 | 0.05 | 12.84 | 0.00 | 2.222 | 6.32 | 0.25 | 4.0 | 96.0 | 0.0 | 0.10 | 0.72 | 0.81 | 2.93 | 3.7 | 0.002 | 0.49 | 0.0 | 0.04 | 14.17 | 0.00 | 2.038 | 6.09 | 0.37 | 2.2 | 97.8 | 0.0 | 0.83 | 0.30 | 0.76 | 0.83 | 2.45 | 15366 | 1954 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 6C4H | 7340 | 2023-11-16 | 2018-01-12 | 3.1 | 3.33 | — | 3.3 | 0.011 | 1.20 | 1.0 | 0.11 | 16.66 | 0.05 | 1.913 | 7.67 | 6.80 | 5.3 | 94.7 | 0.0 | -2.61 | 0.43 | 0.85 | 3.61 | 3.3 | 0.007 | 0.88 | 0.0 | 0.04 | 15.54 | 0.01 | 1.820 | 7.63 | 0.68 | 6.4 | 93.6 | 0.0 | -2.13 | 0.38 | 0.39 | 0.85 | 4.83 | 15326 | 184 | 8 | 648 | 34 | 0 | 0 | logfile |
✔ | 6CDE | 7459 | 2023-11-21 | 2018-02-08 | 3.8 | 4.08 | — | 3.9 | 0.008 | 1.11 | 0.0 | 0.10 | 9.89 | 0.01 | 1.655 | 8.88 | 0.21 | 6.0 | 94.0 | 0.0 | -3.29 | 0.77 | 0.84 | 3.13 | 3.9 | 0.006 | 0.77 | 0.0 | 0.05 | 14.19 | 0.00 | 2.161 | 11.31 | 0.78 | 6.2 | 93.8 | 0.0 | -1.26 | 0.68 | 0.78 | 0.86 | 2.92 | 32973 | 3846 | 81 | 0 | 222 | 0 | 0 | logfile |
✔ | 7o24 | 12698 | 2023-11-14 | 2021-03-30 | 4.8 | 4.54 | 4.80 | 4.4 | 0.003 | 0.62 | 0.0 | 0.04 | 17.15 | 0.00 | 2.084 | 14.17 | 1.38 | 3.2 | 96.6 | 0.2 | 0.00 | 0.76 | 0.80 | — | 4.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.63 | 0.00 | 2.167 | 12.16 | 0.23 | 3.9 | 95.9 | 0.2 | -0.05 | 0.98 | 0.76 | 0.80 | — | 9318 | 1090 | 5 | 46 | 0 | 0 | 0 | logfile |
✔ | 7EDG | 31070 | 2023-11-19 | 2021-03-16 | 3.2 | 3.75 | — | 3.7 | 0.004 | 0.68 | 0.0 | 0.05 | 13.81 | 0.00 | 1.362 | 6.89 | 0.45 | 6.7 | 92.9 | 0.4 | -1.02 | 0.79 | 0.80 | 2.17 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 15.16 | 0.00 | 2.145 | 6.54 | 0.27 | 6.6 | 93.3 | 0.1 | -0.69 | 0.30 | 0.80 | 0.82 | 1.88 | 24715 | 3023 | 36 | 0 | 79 | 0 | 0 | logfile |
✔ | 6AZ1 | 7024 | 2023-11-19 | 2017-09-09 | 2.7 | 3.09 | — | 3.1 | 0.012 | 1.24 | 0.0 | 0.06 | 18.05 | 0.04 | 1.149 | 5.30 | 1.36 | 6.0 | 93.9 | 0.1 | -3.90 | 0.53 | 0.81 | 4.56 | 3.1 | 0.005 | 0.92 | 0.0 | 0.04 | 18.87 | 0.01 | 2.032 | 10.17 | 3.57 | 6.8 | 93.2 | 0.0 | -1.32 | 0.41 | 0.50 | 0.79 | 3.33 | 80594 | 4810 | 66 | 2001 | 30 | 262 | 0 | logfile |
✔ | 6NUE | 0519 | 2023-11-17 | 2019-01-31 | 3.3 | 3.58 | — | 3.6 | 0.002 | 0.47 | 0.0 | 0.04 | 11.15 | 0.00 | 2.214 | 5.49 | 0.34 | 15.3 | 82.3 | 2.4 | -5.57 | 0.58 | 0.57 | 0.80 | 3.6 | 0.005 | 0.83 | 0.0 | 0.05 | 16.24 | 0.00 | 2.069 | 12.28 | 0.48 | 8.7 | 91.1 | 0.1 | -2.72 | 1.22 | 0.70 | 0.79 | 2.03 | 20175 | 2412 | 12 | 40 | 1 | 0 | 0 | logfile |
✔ | 7V88 | 31793 | 2023-11-21 | 2021-08-22 | 3.3 | 4.01 | — | 3.6 | 0.005 | 0.63 | 0.0 | 0.05 | 14.17 | 0.00 | 2.106 | 12.04 | 0.00 | 5.7 | 94.3 | 0.1 | -0.29 | 0.86 | 0.84 | 1.72 | 3.7 | 0.004 | 0.61 | 0.0 | 0.04 | 15.63 | 0.00 | 2.105 | 10.53 | 0.21 | 6.1 | 93.8 | 0.0 | -0.14 | 0.31 | 0.86 | 0.86 | 1.46 | 35098 | 4281 | 47 | 0 | 89 | 0 | 0 | logfile |
✔ | 7K0Q | 22608 | 2023-11-14 | 2020-09-04 | 3.3 | 3.61 | — | 3.5 | 0.006 | 0.70 | 0.0 | 0.05 | 12.64 | 0.00 | 2.116 | 5.18 | 0.00 | 3.3 | 96.7 | 0.0 | 0.45 | 0.70 | 0.85 | 3.35 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 14.21 | 0.00 | 2.189 | 4.84 | 0.11 | 2.5 | 97.5 | 0.0 | 1.24 | 1.46 | 0.73 | 0.87 | 2.87 | 8778 | 1107 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PUT | 20481 | 2023-11-15 | 2019-07-18 | 2.9 | 3.22 | 2.96 | 3.2 | 0.007 | 0.82 | 0.0 | 0.05 | 19.07 | 0.01 | 0.000 | 5.13 | 0.20 | 2.5 | 97.5 | 0.0 | -3.43 | 0.73 | 0.90 | 4.56 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 20.66 | 0.00 | 0.000 | 8.82 | 1.11 | 2.0 | 98.0 | 0.0 | 0.82 | 0.88 | 0.65 | 0.89 | 4.06 | 10976 | 1170 | 28 | 68 | 8 | 308 | 0 | logfile |
✔ | 8DTH | 27698 | 2023-11-15 | 2022-07-25 | 3.6 | 3.70 | 3.53 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 12.28 | 0.01 | 2.196 | 3.90 | 0.00 | 5.5 | 94.5 | 0.0 | -0.11 | 0.84 | 0.83 | 2.66 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.04 | 0.00 | 2.153 | 7.57 | 0.25 | 2.4 | 97.6 | 0.0 | 2.63 | 0.41 | 0.85 | 0.84 | 2.31 | 11153 | 1437 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DTG | 27697 | 2023-11-15 | 2022-07-25 | 3.9 | 3.99 | 3.88 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 12.36 | 0.01 | 2.136 | 8.01 | 0.00 | 5.6 | 94.4 | 0.0 | 0.05 | 0.81 | 0.80 | 2.03 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 14.59 | 0.00 | 2.137 | 9.99 | 0.18 | 2.2 | 97.8 | 0.0 | 2.05 | 0.49 | 0.81 | 0.83 | 1.20 | 11451 | 1539 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N8o | 0374 | 2023-11-18 | 2018-11-29 | 3.5 | 3.74 | — | 3.6 | 0.007 | 0.89 | 2.0 | 0.05 | 14.62 | 0.01 | 1.297 | 2.91 | 0.56 | 7.2 | 92.4 | 0.4 | -4.60 | 0.82 | 0.89 | 3.44 | 3.6 | 0.005 | 0.63 | 0.0 | 0.04 | 15.58 | 0.00 | 2.067 | 7.84 | 0.69 | 8.0 | 91.9 | 0.2 | -1.12 | 1.99 | 0.81 | 0.88 | 2.40 | 133453 | 7292 | 49 | 3480 | 302 | 0 | 0 | logfile |