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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KUY | 23041 | 2023-11-16 | 2020-11-25 | 3.6 | 3.77 | — | 3.8 | 0.006 | 0.91 | 0.0 | 0.06 | 13.89 | 0.01 | 2.208 | 7.93 | 0.14 | 6.3 | 93.7 | 0.0 | -4.24 | 0.70 | 0.86 | 3.06 | 3.8 | 0.004 | 0.68 | 0.0 | 0.05 | 15.61 | 0.00 | 2.111 | 11.42 | 0.49 | 4.5 | 95.5 | 0.0 | -1.25 | 0.46 | 0.70 | 0.86 | 2.46 | 13633 | 1694 | 10 | 0 | 14 | 0 | 0 | logfile |
✔ | 8GVH | 34293 | 2023-11-15 | 2022-09-15 | 3.32 | 3.55 | 3.33 | 3.6 | 0.003 | 0.66 | 0.0 | 0.12 | 15.02 | 0.00 | 2.235 | 6.44 | 0.07 | 5.6 | 94.3 | 0.1 | -0.39 | 0.63 | 0.80 | 1.54 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 16.91 | 0.00 | 2.157 | 5.82 | 0.15 | 6.0 | 93.9 | 0.1 | 0.51 | 0.36 | 0.57 | 0.78 | 1.63 | 12602 | 1576 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8GV9 | 34288 | 2023-11-15 | 2022-09-14 | 3.06 | 3.27 | 3.06 | 3.3 | 0.004 | 0.69 | 0.0 | 0.05 | 16.24 | 0.01 | 2.028 | 6.06 | 0.23 | 5.0 | 94.8 | 0.2 | -0.09 | 0.65 | 0.82 | 1.61 | 3.3 | 0.004 | 0.60 | 0.0 | 0.04 | 17.10 | 0.00 | 2.049 | 5.37 | 0.30 | 5.5 | 94.3 | 0.2 | 0.22 | 0.29 | 0.62 | 0.82 | 1.48 | 12170 | 1532 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7BTR | 30183 | 2023-11-16 | 2020-04-02 | 4.54 | 4.80 | — | 4.5 | 0.007 | 1.23 | 0.0 | 0.06 | 12.09 | 0.01 | 2.037 | 10.84 | 0.99 | 14.4 | 85.6 | 0.0 | -4.59 | 0.88 | 0.78 | — | 4.5 | 0.003 | 0.80 | 0.0 | 0.05 | 12.38 | 0.01 | 2.116 | 18.29 | 0.00 | 11.9 | 88.1 | 0.0 | -2.23 | 1.69 | 0.88 | 0.80 | — | 16737 | 2087 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EJC | 28177 | 2023-11-14 | 2022-09-16 | 3.0 | 3.01 | 3.04 | 3.1 | 0.006 | 0.64 | 0.0 | 0.04 | 13.25 | 0.00 | 2.199 | 9.48 | 0.00 | 3.6 | 96.4 | 0.0 | 1.20 | 0.69 | 0.84 | 3.08 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 16.03 | 0.00 | 2.174 | 9.36 | 1.66 | 3.7 | 96.3 | 0.0 | 1.07 | 0.36 | 0.69 | 0.85 | 2.25 | 8659 | 1132 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N0C | 24103 | 2023-11-13 | 2021-05-25 | 3.4 | 3.71 | — | 3.7 | 0.009 | 1.00 | 0.0 | 0.05 | 13.78 | 0.01 | 2.180 | 6.79 | 0.00 | 1.3 | 98.7 | 0.0 | -3.80 | 0.72 | 0.80 | 2.48 | 3.7 | 0.002 | 0.57 | 0.0 | 0.04 | 14.64 | 0.00 | 1.187 | 9.74 | 0.18 | 4.9 | 95.1 | 0.0 | -1.13 | 0.49 | 0.72 | 0.81 | 1.59 | 6088 | 644 | 6 | 49 | 7 | 1 | 0 | logfile |
✔ | 7L2P | 23136 | 2023-11-17 | 2020-12-17 | 2.6 | 2.86 | 2.54 | 2.9 | 0.006 | 0.97 | 0.0 | 0.27 | 12.51 | 0.00 | 2.080 | 1.42 | 0.76 | 6.5 | 93.4 | 0.1 | 0.13 | 0.60 | 0.79 | 3.53 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 16.02 | 0.00 | 2.188 | 7.76 | 1.21 | 6.7 | 93.3 | 0.0 | 0.97 | 3.17 | 0.60 | 0.84 | 3.63 | 18448 | 2234 | 8 | 0 | 9 | 0 | 0 | logfile |
✔ | 6XDC | 22136 | 2023-11-13 | 2020-06-10 | 2.9 | 3.80 | — | 3.7 | 0.006 | 0.79 | 0.0 | 0.06 | 13.65 | 0.01 | 2.279 | 4.95 | 1.15 | 4.0 | 96.0 | 0.0 | -2.72 | 0.47 | 0.71 | 3.58 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 15.30 | 0.00 | 2.197 | 9.57 | 2.59 | 3.7 | 96.3 | 0.0 | 0.98 | 1.70 | 0.45 | 0.69 | 3.50 | 3150 | 386 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AJQ | 11806 | 2023-11-14 | 2020-09-29 | 4.0 | 3.67 | 4.30 | 4.2 | 0.002 | 0.55 | 0.0 | 0.03 | 13.10 | 0.00 | 2.208 | 12.84 | 0.00 | 3.5 | 96.5 | 0.0 | -0.98 | 0.76 | 0.76 | — | 4.2 | 0.003 | 0.92 | 0.0 | 0.05 | 15.83 | 0.00 | 2.139 | 20.36 | 0.21 | 3.6 | 96.4 | 0.0 | 0.85 | 0.86 | 0.77 | 0.77 | — | 9210 | 1222 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y9V | 33693 | 2023-11-14 | 2022-06-26 | 3.2 | 3.43 | 3.15 | 3.4 | 0.013 | 1.21 | 6.0 | 0.06 | 10.86 | 0.01 | 2.057 | 4.79 | 0.48 | 5.1 | 94.9 | 0.0 | -5.91 | 0.62 | 0.83 | 3.18 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 13.79 | 0.00 | 2.177 | 7.54 | 0.00 | 4.0 | 96.0 | 0.0 | -0.32 | 1.22 | 0.64 | 0.86 | 2.32 | 7734 | 988 | 8 | 0 | 2 | 4 | 0 | logfile |
✔ | 6V11 | 21009 | 2023-11-18 | 2019-11-19 | 3.8 | 4.18 | 3.97 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 11.18 | 0.01 | 2.243 | 6.55 | 0.90 | 8.1 | 91.9 | 0.0 | -4.51 | 0.79 | 0.81 | 1.63 | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.42 | 0.00 | 2.134 | 11.45 | 0.33 | 5.1 | 94.9 | 0.0 | -0.85 | 2.18 | 0.80 | 0.82 | 1.07 | 22626 | 2915 | 11 | 0 | 5 | 0 | 0 | logfile |
✔ | 7EW7 | 31349 | 2023-11-15 | 2021-05-24 | 3.27 | 3.91 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 13.52 | 0.00 | 2.016 | 6.73 | 0.71 | 3.6 | 96.4 | 0.0 | -2.17 | 0.56 | 0.74 | 2.49 | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 15.58 | 0.00 | 2.134 | 6.73 | 0.20 | 3.8 | 96.2 | 0.0 | -0.29 | 0.95 | 0.60 | 0.78 | 1.96 | 9004 | 1144 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6oRo | 20176 | 2023-11-17 | 2019-04-30 | 3.9 | 4.21 | 3.87 | 4.2 | 0.009 | 1.32 | 3.0 | 0.09 | 11.96 | 0.01 | 2.048 | 4.78 | 2.93 | 13.1 | 86.4 | 0.6 | -5.30 | 0.62 | 0.84 | 2.16 | 4.2 | 0.005 | 0.88 | 0.0 | 0.05 | 15.52 | 0.00 | 2.194 | 11.28 | 1.15 | 14.6 | 85.3 | 0.2 | -3.65 | 0.63 | 0.62 | 0.85 | 2.09 | 20085 | 2415 | 45 | 0 | 96 | 0 | 0 | logfile |
✔ | 7TTi | 26116 | 2023-11-14 | 2022-02-01 | 3.5 | 3.76 | — | 3.8 | 0.008 | 0.63 | 0.0 | 0.04 | 13.93 | 0.01 | 1.990 | 50.92 | 0.28 | 7.7 | 92.3 | 0.0 | 1.88 | 0.46 | 0.65 | 2.20 | 3.8 | 0.005 | 0.78 | 0.0 | 0.05 | 14.84 | 0.01 | 2.236 | 9.77 | 1.40 | 6.7 | 93.3 | 0.0 | 0.66 | 0.61 | 0.62 | 0.78 | 2.22 | 7670 | 1084 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 8CTH | 26990 | 2023-11-13 | 2022-05-14 | 3.3 | 3.53 | 3.29 | 3.5 | 0.014 | 1.05 | 0.0 | 0.04 | 15.98 | 0.07 | 2.257 | 12.01 | 0.00 | 3.3 | 96.7 | 0.0 | -1.68 | 0.64 | 0.67 | 1.91 | 3.5 | 0.003 | 1.29 | 0.0 | 0.04 | 18.02 | 0.01 | 2.071 | 13.69 | 0.00 | 5.8 | 94.2 | 0.0 | -0.90 | 1.22 | 0.66 | 0.69 | 2.25 | 5544 | 495 | 4 | 74 | 0 | 0 | 0 | logfile |
✔ | 7N0L | 24108 | 2023-11-13 | 2021-05-25 | 2.8 | 2.17 | — | 3.1 | 0.065 | 1.95 | 0.0 | 0.04 | 21.58 | 0.00 | 1.675 | 18.13 | 9.23 | 2.0 | 98.0 | 0.0 | -6.10 | 0.56 | 0.80 | 3.16 | 3.1 | 0.002 | 0.66 | 0.0 | 0.04 | 19.76 | 0.00 | 2.190 | 15.04 | 5.90 | 0.3 | 99.7 | 0.0 | 1.88 | 1.26 | 0.56 | 0.81 | 2.04 | 5270 | 626 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XL6 | 22235 | 2023-11-13 | 2020-06-28 | 3.0 | 3.41 | — | 3.3 | 0.005 | 0.68 | 0.0 | 0.05 | 20.19 | 0.00 | 2.257 | 5.23 | 0.00 | 0.0 | 100.0 | 0.0 | -1.93 | 0.76 | 0.83 | 2.94 | 3.3 | 0.004 | 0.55 | 0.0 | 0.04 | 21.29 | 0.00 | 2.243 | 6.76 | 2.45 | 1.7 | 98.3 | 0.0 | 0.41 | 1.38 | 0.75 | 0.83 | 2.63 | 5456 | 536 | 6 | 46 | 4 | 0 | 0 | logfile |
✔ | 6UW9 | 20920 | 2023-11-17 | 2019-11-04 | 4.33 | 4.42 | — | 4.3 | 0.005 | 1.14 | 0.0 | 0.06 | 15.43 | 0.01 | 1.932 | 8.33 | 0.20 | 7.3 | 92.7 | 0.0 | -4.94 | 0.67 | 0.79 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.04 | 14.75 | 0.00 | 2.092 | 10.75 | 0.00 | 6.7 | 93.3 | 0.0 | -0.53 | 0.75 | 0.67 | 0.79 | — | 18924 | 2328 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B5C | 12025 | 2023-11-15 | 2020-12-03 | 3.7 | 3.81 | 3.61 | 3.8 | 0.005 | 0.86 | 0.0 | 0.05 | 15.21 | 0.01 | 2.239 | 7.43 | 0.78 | 5.9 | 94.1 | 0.0 | -3.64 | 0.62 | 0.77 | 1.51 | 3.8 | 0.004 | 0.72 | 0.0 | 0.04 | 16.46 | 0.01 | 2.097 | 11.63 | 0.55 | 6.2 | 93.8 | 0.0 | -0.41 | 0.66 | 0.62 | 0.77 | 1.34 | 11770 | 1436 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7VAB | 31836 | 2023-11-14 | 2021-08-28 | 3.2 | 3.44 | — | 3.4 | 0.004 | 0.80 | 0.0 | 0.06 | 8.78 | 0.01 | 2.270 | 4.38 | 0.00 | 1.9 | 98.1 | 0.0 | -2.44 | 0.55 | 0.70 | 2.90 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 14.70 | 0.00 | 2.120 | 6.94 | 0.65 | 2.7 | 97.3 | 0.0 | 0.78 | 0.82 | 0.68 | 0.82 | 2.68 | 8772 | 1077 | 7 | 0 | 6 | 0 | 0 | logfile |