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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8YBE | 39117 | 2024-04-05 | 2024-02-13 | 2.3 | 2.50 | 2.34 | 2.5 | 0.006 | 0.89 | 0.0 | 0.05 | 15.84 | 0.01 | 2.236 | 18.77 | 2.34 | 0.0 | 100.0 | 0.0 | 1.36 | 0.67 | 0.82 | 5.54 | 2.5 | 0.004 | 0.63 | 0.0 | 0.04 | 16.54 | 0.00 | 2.202 | 12.22 | 2.01 | 2.4 | 97.6 | 0.0 | 1.42 | 0.30 | 0.67 | 0.83 | 5.63 | 3110 | 370 | 3 | 0 | 2 | 197 | 0 | logfile |
✔ | 8Y7E | 39013 | 2024-04-12 | 2024-02-04 | 4.66 | 8.34 | 13.59 | 40.0 | 0.023 | 1.39 | 0.0 | 0.09 | 15.11 | 0.01 | 2.073 | 10.06 | 3.83 | 3.1 | 96.9 | 0.0 | -1.68 | 0.32 | 0.10 | — | 10.0 | 0.003 | 0.62 | 0.0 | 0.04 | 13.94 | 0.00 | 2.050 | 14.14 | 0.00 | 2.6 | 97.4 | 0.0 | 0.30 | 2.12 | 0.41 | 0.29 | — | 26949 | 3426 | 19 | 80 | 4 | 0 | 0 | logfile |
✔ | 8Y6o | 38993 | 2024-04-15 | 2024-02-02 | 3.38 | 3.70 | 3.44 | 3.4 | 0.006 | 0.85 | 0.0 | 0.08 | 17.26 | 0.01 | 1.966 | 23.96 | 0.57 | 3.6 | 96.2 | 0.1 | -0.16 | 0.72 | 0.73 | 1.84 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 17.72 | 0.00 | 1.979 | 13.46 | 1.75 | 3.6 | 96.4 | 0.0 | 0.36 | 1.27 | 0.74 | 0.76 | 1.66 | 101492 | 11518 | 53 | 398 | 11 | 0 | 0 | logfile |
✔ | 8XZJ | 38798 | 2024-04-06 | 2024-01-21 | 3.0 | 2.01 | — | 1.7 | 0.011 | 0.94 | 0.0 | 0.06 | 11.33 | 0.01 | 2.252 | 11.85 | 2.72 | 1.8 | 97.9 | 0.3 | 0.36 | 0.70 | 0.73 | 4.12 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.07 | 0.00 | 2.108 | 8.64 | 2.12 | 2.2 | 97.7 | 0.1 | 1.10 | 1.18 | 0.73 | 0.80 | 3.13 | 9106 | 1162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZH | 38796 | 2024-04-06 | 2024-01-21 | 2.6 | 2.02 | — | 1.6 | 0.012 | 0.97 | 0.0 | 0.07 | 13.62 | 0.01 | 2.171 | 7.47 | 0.61 | 4.3 | 95.6 | 0.1 | -1.34 | 0.77 | 0.83 | 5.30 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 16.22 | 0.00 | 2.174 | 7.47 | 2.55 | 2.0 | 98.0 | 0.0 | 1.09 | 0.94 | 0.77 | 0.85 | 3.93 | 9048 | 1159 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZG | 38795 | 2024-04-06 | 2024-01-21 | 3.2 | 3.59 | 3.31 | 3.6 | 0.008 | 0.88 | 0.0 | 0.06 | 14.04 | 0.00 | 2.173 | 9.19 | 1.56 | 6.1 | 93.8 | 0.1 | -2.72 | 0.62 | 0.77 | 2.19 | 3.6 | 0.002 | 0.55 | 0.0 | 0.04 | 15.76 | 0.00 | 2.199 | 5.96 | 2.20 | 2.9 | 97.1 | 0.0 | -0.20 | 0.43 | 0.57 | 0.76 | 1.56 | 7172 | 919 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XZF | 38794 | 2024-04-06 | 2024-01-21 | 3.0 | 2.18 | — | 2.9 | 0.007 | 0.72 | 1.0 | 0.05 | 12.98 | 0.00 | 2.091 | 9.31 | 0.51 | 4.3 | 95.5 | 0.2 | -2.36 | 0.79 | 0.81 | 4.27 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.71 | 0.00 | 2.092 | 9.25 | 2.25 | 3.9 | 96.0 | 0.1 | 0.39 | 0.51 | 0.80 | 0.83 | 3.26 | 9062 | 1161 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XV9 | 38693 | 2024-04-05 | 2024-01-14 | 3.8 | 2.50 | 3.79 | 2.0 | 0.008 | 0.94 | 0.0 | 0.05 | 12.31 | 0.01 | 2.402 | 2.22 | 0.00 | 5.5 | 94.5 | 0.0 | -3.53 | 0.58 | 0.61 | 1.87 | 2.9 | 0.003 | 0.74 | 0.0 | 0.04 | 16.67 | 0.00 | 2.238 | 11.72 | 3.00 | 4.7 | 95.3 | 0.0 | 1.29 | 0.80 | 0.60 | 0.64 | 1.72 | 3147 | 388 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XV5 | 38692 | 2024-04-05 | 2024-01-14 | 3.7 | 2.43 | 3.72 | 2.9 | 0.005 | 0.90 | 0.0 | 0.05 | 9.70 | 0.01 | 2.280 | 3.19 | 0.00 | 4.4 | 95.6 | 0.0 | -3.67 | 0.68 | 0.71 | 3.33 | 2.1 | 0.011 | 1.40 | 1.0 | 0.05 | 15.38 | 0.01 | 2.236 | 11.49 | 2.70 | 2.9 | 97.1 | 0.0 | 1.20 | 0.65 | 0.69 | 0.72 | 3.08 | 3122 | 388 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XV2 | 38691 | 2024-04-05 | 2024-01-14 | 3.7 | 2.50 | 3.71 | 2.8 | 0.009 | 0.99 | 0.0 | 0.06 | 9.84 | 0.01 | 2.318 | 2.55 | 0.00 | 5.2 | 94.8 | 0.0 | -3.54 | 0.65 | 0.73 | 3.48 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.10 | 0.00 | 2.306 | 11.47 | 1.80 | 4.2 | 95.8 | 0.0 | 1.00 | 1.26 | 0.65 | 0.73 | 2.18 | 3128 | 388 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XoP | 38537 | 2024-04-10 | 2024-01-02 | 2.8 | 3.94 | 2.89 | 3.5 | 0.005 | 0.69 | 0.0 | 0.04 | 12.47 | 0.01 | 2.120 | 10.63 | 0.00 | 2.0 | 97.9 | 0.0 | 1.41 | 0.85 | 0.87 | 2.82 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 16.03 | 0.00 | 2.186 | 13.60 | 3.47 | 2.6 | 97.4 | 0.0 | 1.44 | 0.97 | 0.86 | 0.89 | 2.52 | 19740 | 2562 | 28 | 0 | 14 | 0 | 0 | logfile |
✔ | 8XN4 | 38497 | 2024-04-10 | 2023-12-29 | 2.34 | 2.61 | 2.44 | 2.2 | 0.005 | 0.81 | 1.0 | 0.05 | 18.21 | 0.01 | 2.200 | 11.08 | 3.23 | 2.5 | 97.4 | 0.1 | 1.34 | 0.86 | 0.87 | 3.46 | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 18.13 | 0.00 | 2.168 | 9.93 | 3.72 | 2.1 | 97.9 | 0.0 | 1.93 | 0.95 | 0.86 | 0.87 | 2.68 | 19173 | 2506 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 8XMo | 38484 | 2024-04-08 | 2023-12-27 | 3.39 | 3.66 | 3.42 | 3.6 | 0.015 | 1.57 | 13.0 | 0.09 | 18.70 | 0.01 | 2.039 | 20.52 | 2.81 | 4.9 | 95.0 | 0.1 | -0.94 | 0.65 | 0.80 | 1.74 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 17.49 | 0.00 | 2.139 | 11.77 | 2.39 | 3.5 | 96.5 | 0.0 | 0.17 | 1.22 | 0.63 | 0.81 | 1.75 | 13323 | 1578 | 7 | 0 | 22 | 0 | 0 | logfile |
✔ | 8XMN | 38483 | 2024-04-08 | 2023-12-27 | 3.37 | 3.70 | 3.48 | 3.6 | 0.012 | 1.29 | 4.0 | 0.08 | 17.91 | 0.01 | 2.202 | 20.51 | 2.34 | 6.6 | 93.2 | 0.2 | -1.12 | 0.57 | 0.80 | 1.93 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 17.77 | 0.00 | 2.212 | 13.00 | 2.34 | 4.8 | 95.2 | 0.0 | -0.02 | 0.55 | 0.58 | 0.82 | 1.45 | 13110 | 1569 | 7 | 0 | 18 | 0 | 0 | logfile |
✔ | 8XMM | 38482 | 2024-04-07 | 2023-12-27 | 2.89 | 3.35 | 2.94 | 3.2 | 0.010 | 1.15 | 0.0 | 0.06 | 21.27 | 0.01 | 2.077 | 12.01 | 0.34 | 3.7 | 96.3 | 0.0 | 0.13 | 0.64 | 0.83 | 2.63 | 3.2 | 0.005 | 0.64 | 0.0 | 0.04 | 18.84 | 0.00 | 2.166 | 7.87 | 1.78 | 4.1 | 95.9 | 0.0 | 1.00 | 0.43 | 0.56 | 0.80 | 2.62 | 11389 | 1318 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 8XMi | 38478 | 2024-04-12 | 2023-12-27 | 3.0 | 3.24 | 3.00 | 3.2 | 0.004 | 0.60 | 0.0 | 0.04 | 11.90 | 0.00 | 2.262 | 3.82 | 1.56 | 3.0 | 97.0 | 0.0 | -2.19 | 0.74 | 0.83 | 3.59 | 3.2 | 0.003 | 0.57 | 0.0 | 0.04 | 15.61 | 0.00 | 2.157 | 8.37 | 2.36 | 2.6 | 97.4 | 0.0 | 0.77 | 1.05 | 0.74 | 0.87 | 2.75 | 26718 | 3415 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8XMH | 38477 | 2024-04-12 | 2023-12-27 | 2.85 | 3.05 | 2.86 | 3.1 | 0.004 | 0.53 | 0.0 | 0.04 | 10.95 | 0.00 | 2.290 | 3.16 | 1.55 | 2.7 | 97.3 | 0.0 | -1.68 | 0.71 | 0.81 | 3.33 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 15.51 | 0.00 | 2.213 | 7.52 | 2.44 | 3.1 | 96.9 | 0.0 | 1.26 | 0.68 | 0.74 | 0.87 | 2.70 | 26948 | 3444 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8XJo | 38403 | 2024-04-06 | 2023-12-21 | 3.11 | 3.33 | 3.18 | 3.3 | 0.006 | 0.62 | 0.0 | 0.15 | 8.84 | 0.00 | 2.213 | 5.30 | 1.06 | 1.2 | 98.8 | 0.0 | 1.07 | 0.65 | 0.80 | 3.29 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 14.07 | 0.00 | 2.108 | 7.62 | 3.70 | 1.7 | 98.3 | 0.0 | 1.36 | 0.60 | 0.65 | 0.81 | 2.63 | 8950 | 1164 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XJM | 38401 | 2024-04-06 | 2023-12-21 | 2.85 | 3.04 | 2.79 | 3.0 | 0.003 | 0.42 | 0.0 | 0.04 | 10.25 | 0.00 | 2.256 | 4.68 | 1.05 | 1.3 | 98.7 | 0.0 | 1.55 | 0.67 | 0.82 | 4.65 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 14.72 | 0.00 | 2.198 | 7.31 | 2.43 | 1.9 | 98.1 | 0.0 | 2.00 | 1.19 | 0.68 | 0.83 | 4.09 | 8849 | 1140 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XJL | 38400 | 2024-04-06 | 2023-12-21 | 2.77 | 2.89 | 2.74 | 2.9 | 0.004 | 0.53 | 0.0 | 0.15 | 9.89 | 0.00 | 2.225 | 5.03 | 1.05 | 1.1 | 98.9 | 0.0 | 1.28 | 0.70 | 0.80 | 3.93 | 2.9 | 0.002 | 0.52 | 0.0 | 0.04 | 14.59 | 0.00 | 2.182 | 6.62 | 1.48 | 1.8 | 98.2 | 0.0 | 1.86 | 0.58 | 0.68 | 0.80 | 3.12 | 8846 | 1140 | 6 | 0 | 1 | 0 | 0 | logfile |