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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7WJU | 32548 | 2023-11-14 | 2022-01-07 | 2.69 | 2.82 | — | 2.8 | 0.007 | 0.99 | 0.0 | 0.07 | 17.67 | 0.01 | 2.325 | 3.53 | 0.00 | 5.3 | 94.5 | 0.2 | -2.47 | 0.72 | 0.81 | 3.88 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8322 | 607 | 5 | 158 | 0 | 0 | 0 | logfile |
✔ | 7XoY | 33363 | 2023-11-15 | 2022-05-01 | 4.25 | 4.23 | 4.31 | 4.3 | 0.006 | 0.73 | 0.0 | 0.05 | 13.20 | 0.00 | 2.255 | 45.15 | 8.23 | 10.2 | 88.7 | 1.2 | -2.66 | 0.80 | 0.81 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 12.34 | 0.01 | 2.090 | 11.37 | 0.00 | 7.6 | 92.4 | 0.1 | -1.07 | 0.87 | 0.80 | 0.82 | — | 13264 | 1832 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 7X0X | 32928 | 2023-11-20 | 2022-02-22 | 2.56 | 3.09 | 2.66 | 3.0 | 0.008 | 1.00 | 0.0 | 0.06 | 15.31 | 0.01 | 2.280 | 3.83 | 1.15 | 4.7 | 95.3 | 0.0 | -5.09 | 0.74 | 0.82 | 4.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15680 | 1904 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 8SAN | 40274 | 2023-11-17 | 2023-04-01 | 4.6 | 4.80 | 4.46 | 4.7 | 0.006 | 0.97 | 0.0 | 0.06 | 13.48 | 0.01 | 2.064 | 5.03 | 0.09 | 9.9 | 89.9 | 0.2 | -2.24 | 0.68 | 0.75 | — | 4.7 | 0.003 | 0.81 | 0.0 | 0.05 | 13.97 | 0.00 | 2.083 | 15.37 | 0.05 | 9.4 | 90.4 | 0.2 | -2.04 | 0.61 | 0.70 | 0.77 | — | 19908 | 2454 | 21 | 0 | 48 | 0 | 0 | logfile |
✔ | 6oo2 | 20142 | 2023-11-16 | 2019-04-22 | 4.4 | 4.52 | — | 3.5 | 0.007 | 1.14 | 1.0 | 0.07 | 13.96 | 0.01 | 2.037 | 7.03 | 0.00 | 7.1 | 92.3 | 0.6 | -3.55 | 0.75 | 0.61 | — | 2.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.05 | 0.00 | 0.883 | 14.96 | 0.07 | 4.7 | 95.3 | 0.0 | 1.49 | 1.05 | 0.86 | 0.80 | — | 16691 | 2436 | 24 | 0 | 19 | 0 | 0 | logfile |
✘ | 6WXV | 21964 | 2023-11-15 | 2020-05-12 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10605 | 1319 | 5 | 0 | 15 | 0 | 0 | logfile |
✔ | 6K4M | 9915 | 2023-11-20 | 2019-05-24 | 4.5 | 7.82 | — | 7.8 | 0.006 | 1.01 | 0.0 | 0.05 | 17.74 | 0.00 | 2.258 | 13.35 | 0.54 | 1.8 | 98.2 | 0.0 | -4.61 | 0.68 | 0.84 | — | 7.8 | 0.004 | 0.90 | 0.0 | 0.04 | 15.28 | 0.00 | 2.080 | 24.57 | 0.15 | 2.6 | 97.4 | 0.0 | -0.40 | 1.59 | 0.70 | 0.86 | — | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✘ | 7QHM | 13976 | 2023-11-21 | 2021-12-13 | 2.8 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 94633 | 5886 | 67 | 0 | 88 | 416 | 45103 | logfile |
✔ | 7UY8 | 26867 | 2023-11-14 | 2022-05-06 | 4.5 | 8.56 | 4.38 | 4.2 | 0.003 | 0.63 | 1.0 | 0.05 | 14.55 | 0.00 | 2.207 | 8.69 | 0.00 | 6.1 | 93.9 | 0.0 | -0.66 | 0.79 | 0.60 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.44 | 0.00 | 2.152 | 20.87 | 0.00 | 5.8 | 94.1 | 0.1 | -0.35 | 1.42 | 0.92 | 0.85 | — | 9552 | 1161 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6oCE | 20017 | 2023-11-15 | 2019-03-23 | 4.9 | 4.11 | — | 4.0 | 0.006 | 0.73 | 0.0 | 0.04 | 8.07 | 0.01 | 1.868 | 8.56 | 0.00 | 9.9 | 90.1 | 0.0 | -4.37 | 0.45 | 0.60 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 12.52 | 0.01 | 2.176 | 12.97 | 0.00 | 12.3 | 87.7 | 0.0 | -2.82 | 1.19 | 0.46 | 0.63 | — | 11228 | 1378 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 7W9T | 32372 | 2023-11-16 | 2021-12-10 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14841 | 1709 | 8 | 0 | 39 | 0 | 0 | logfile |
✔ | 6U1N | 20612 | 2023-11-13 | 2019-08-16 | 4.0 | 4.36 | — | 4.0 | 0.008 | 0.81 | 0.0 | 0.04 | 12.09 | 0.00 | 2.198 | 17.99 | 0.00 | 7.8 | 92.2 | 0.0 | -4.67 | 0.84 | 0.82 | — | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 13.20 | 0.00 | 2.160 | 12.27 | 0.00 | 4.5 | 95.5 | 0.0 | -0.54 | 0.51 | 0.84 | 0.81 | — | 5863 | 864 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XQJ | 33398 | 2023-11-14 | 2022-05-07 | 4.0 | 4.56 | 3.73 | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 15.98 | 0.01 | 2.401 | 6.40 | 6.01 | 6.5 | 93.5 | 0.0 | -2.82 | 0.78 | 0.85 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.04 | 15.98 | 0.00 | 2.320 | 11.01 | 0.46 | 4.8 | 95.2 | 0.0 | 0.90 | 0.78 | 0.78 | 0.85 | — | 9960 | 1224 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7D73 | 30600 | 2023-11-21 | 2020-10-02 | 3.0 | 2.48 | — | 2.7 | 0.011 | 1.23 | 7.0 | 0.07 | 19.92 | 0.01 | 1.302 | 10.00 | 10.36 | 6.3 | 93.4 | 0.3 | -3.01 | 0.55 | 0.71 | 2.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 35292 | 4495 | 24 | 0 | 12 | 0 | 0 | logfile |
✔ | 7ZRL | 14918 | 2023-11-15 | 2022-05-04 | 4.0 | 3.62 | 3.94 | 3.9 | 0.005 | 0.91 | 0.0 | 0.05 | 14.30 | 0.01 | 2.197 | 9.04 | 0.00 | 5.0 | 95.0 | 0.0 | -1.26 | 0.66 | 0.79 | — | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.34 | 0.00 | 2.147 | 14.70 | 0.27 | 4.7 | 95.3 | 0.1 | 0.13 | 0.40 | 0.67 | 0.81 | — | 10782 | 1447 | 5 | 0 | 1 | 0 | 0 | logfile |
✘ | 6K3o | 9910 | 2023-11-20 | 2019-05-21 | 3.4 | 3.86 | — | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 14.46 | 0.00 | 1.077 | 16.09 | 0.00 | 3.8 | 96.2 | 0.0 | -1.52 | 0.79 | 0.82 | 3.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 31508 | 3790 | 48 | 0 | 36 | 0 | 0 | logfile |
✘ | 6oPC | 20149 | 2023-11-20 | 2019-04-24 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30015 | 4455 | 13 | 0 | 48 | 0 | 0 | logfile |
✘ | 7W9M | 32370 | 2023-11-16 | 2021-12-10 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14219 | 1710 | 7 | 0 | 18 | 0 | 0 | logfile |
✔ | 7SN2 | 25209 | 2023-11-15 | 2021-10-27 | 4.3 | 3.73 | — | 3.7 | 0.007 | 1.31 | 1.0 | 0.07 | 14.19 | 0.01 | 1.905 | 8.33 | 0.00 | 0.8 | 98.9 | 0.3 | -1.92 | 0.54 | 0.70 | — | 3.7 | 0.003 | 0.69 | 0.0 | 0.05 | 13.76 | 0.01 | 2.053 | 13.43 | 0.00 | 7.9 | 92.1 | 0.0 | -1.48 | 0.54 | 0.55 | 0.71 | — | 10092 | 650 | 5 | 0 | 10 | 0 | 4904 | logfile |
✔ | 7ZoA | 14845 | 2023-11-14 | 2022-04-24 | 4.0 | 4.31 | 4.04 | 4.2 | 0.004 | 0.81 | 1.0 | 0.07 | 13.97 | 0.00 | 2.176 | 9.69 | 0.11 | 3.3 | 96.4 | 0.4 | 0.93 | 0.64 | 0.75 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 17.03 | 0.00 | 2.148 | 11.84 | 0.43 | 4.3 | 95.4 | 0.3 | 1.32 | 0.82 | 0.69 | 0.81 | — | 9042 | 1140 | 3 | 0 | 18 | 0 | 0 | logfile |