The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6PNJ | 20397 | 2023-11-18 | 2019-07-02 | 3.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 71511 | 6660 | 60 | 0 | 420 | 0 | 0 | logfile |
✘ | 5Y88 | 6817 | 2023-11-18 | 2017-08-20 | 3.46 | 3.56 | — | 3.5 | 0.011 | 1.45 | 25.0 | 0.11 | 15.50 | 0.01 | 1.112 | 25.56 | 5.35 | 6.2 | 92.6 | 1.2 | -2.93 | 0.54 | 0.64 | 1.91 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 72347 | 9113 | 50 | 337 | 14 | 0 | 0 | logfile |
✘ | 6JH6 | 9825 | 2023-11-14 | 2019-02-17 | 4.8 | 5.31 | — | 4.8 | 0.006 | 1.07 | 1.0 | 0.05 | 11.37 | 0.01 | 2.197 | 12.11 | 0.58 | 10.8 | 88.9 | 0.3 | -4.03 | 0.79 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 108924 | 14244 | 12 | 0 | 8 | 0 | 0 | logfile |
✘ | 6Jii | 9834 | 2023-11-15 | 2019-02-21 | 4.2 | 4.38 | — | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 11.41 | 0.01 | 2.208 | 7.63 | 0.57 | 11.2 | 88.4 | 0.4 | -4.07 | 0.78 | 0.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 115028 | 15012 | 16 | 0 | 16 | 0 | 0 | logfile |
✘ | 7SPB | 24769 | 2023-11-14 | 2021-11-02 | 3.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 7SPC | 24770 | 2023-11-20 | 2021-11-02 | 2.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | logfile |
✘ | 8AP4 | 15558 | 2023-11-20 | 2022-08-09 | 3.0 | 2.99 | 2.97 | 3.1 | 0.007 | 0.84 | 0.0 | 0.05 | 14.48 | 0.03 | 1.999 | 4.06 | 1.62 | 3.6 | 96.3 | 0.1 | -0.03 | 0.86 | 0.88 | 2.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 88614 | 3266 | 33 | 2940 | 0 | 0 | 0 | logfile |
✘ | 6PLT | 20375 | 2023-11-16 | 2019-07-01 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14445 | 1725 | 15 | 0 | 60 | 0 | 0 | logfile |
✘ | 6iCZ | 9645 | 2023-11-22 | 2018-09-07 | 3.0 | 3.12 | — | 3.1 | 0.015 | 1.44 | 14.0 | 0.10 | 13.30 | 0.01 | 1.549 | 8.29 | 1.39 | 5.8 | 93.4 | 0.8 | -2.81 | 0.53 | 0.64 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 97900 | 14175 | 58 | 418 | 19 | 0 | 0 | logfile |
✘ | 5TAT | 8384 | 2023-11-16 | 2016-09-10 | 4.8 | 5.01 | 5.79 | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 9.77 | 0.01 | 1.373 | 4.75 | 0.35 | 9.4 | 90.5 | 0.1 | -4.89 | 0.78 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✘ | 6JHN | 9826 | 2023-11-14 | 2019-02-18 | 4.5 | 7.49 | — | 4.4 | 0.010 | 1.23 | 0.0 | 0.06 | 16.52 | 0.01 | 2.114 | 19.26 | 1.44 | 13.9 | 85.8 | 0.3 | -4.27 | 0.85 | 0.83 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 109488 | 14332 | 12 | 0 | 12 | 0 | 0 | logfile |
✘ | 6BPZ | 7128 | 2023-11-18 | 2017-11-27 | 3.8 | 3.99 | — | 3.8 | 0.010 | 1.55 | 0.0 | 0.08 | 11.48 | 0.01 | 2.260 | 3.97 | 0.14 | 7.9 | 91.8 | 0.2 | -4.66 | 0.55 | 0.66 | 1.62 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21453 | 2523 | 3 | 0 | 177 | 0 | 0 | logfile |
✘ | 6JiU | 9836 | 2023-11-14 | 2019-02-23 | 4.2 | 4.52 | — | 4.2 | 0.006 | 1.01 | 9.0 | 0.05 | 15.68 | 0.01 | 2.218 | 10.69 | 0.51 | 10.3 | 89.5 | 0.2 | -5.44 | 0.78 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112212 | 14684 | 20 | 0 | 24 | 0 | 0 | logfile |
✘ | 7L20 | 23121 | 2023-11-14 | 2020-12-15 | 3.15 | 3.39 | — | 3.4 | 0.007 | 0.87 | 0.0 | 0.05 | 16.21 | 0.01 | 0.505 | 10.97 | 0.84 | 7.3 | 92.2 | 0.5 | -3.38 | 0.69 | 0.79 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110234 | 9454 | 67 | 1583 | 171 | 0 | 0 | logfile |
✘ | 5GM6 | 9524 | 2023-11-14 | 2016-07-12 | 3.5 | 3.61 | — | 3.6 | 0.012 | 1.33 | 11.0 | 0.08 | 13.79 | 0.01 | 1.303 | 18.95 | 3.36 | 6.6 | 92.1 | 1.2 | -3.54 | 0.58 | 0.83 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 112064 | 12796 | 55 | 361 | 881 | 0 | 0 | logfile |
✘ | 6AHD | 9624 | 2023-11-20 | 2018-08-17 | 3.8 | 3.84 | — | 3.7 | 0.011 | 1.38 | 2.0 | 0.12 | 13.79 | 0.01 | 1.805 | 14.26 | 2.52 | 7.4 | 91.7 | 0.9 | -3.55 | 0.51 | 0.52 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 85302 | 14082 | 65 | 531 | 3 | 0 | 0 | logfile |
✘ | 7CWL | 30482 | 2023-11-20 | 2020-08-29 | 3.8 | 4.03 | — | 3.8 | 0.009 | 1.09 | 4.0 | 0.07 | 10.20 | 0.01 | 1.462 | 24.00 | 1.07 | 7.6 | 92.0 | 0.4 | -3.59 | 0.71 | 0.63 | 1.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30638 | 3900 | 12 | 0 | 27 | 0 | 0 | logfile |
✘ | 7W92 | 32359 | 2023-11-19 | 2021-12-09 | 3.1 | 2.79 | — | 3.3 | 0.003 | 0.67 | 0.0 | 0.05 | 13.05 | 0.01 | 2.306 | 2.89 | 0.11 | 3.7 | 96.3 | 0.0 | -4.34 | 0.80 | 0.76 | 2.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25071 | 3206 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 8D8K | 27250 | 2023-11-20 | 2022-06-08 | 3.13 | 2.81 | 3.09 | 3.0 | 0.003 | 0.62 | 0.0 | 0.33 | 16.14 | 0.01 | 1.924 | 3.12 | 0.05 | 1.7 | 98.3 | 0.0 | 1.13 | 0.63 | 0.78 | 2.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 88977 | 6864 | 41 | 1538 | 168 | 3 | 0 | logfile |
✘ | 5YLZ | 6839 | 2023-11-19 | 2017-10-20 | 3.6 | 3.71 | — | 3.7 | 0.013 | 1.68 | 60.0 | 0.11 | 15.90 | 0.01 | 1.581 | 22.37 | 4.17 | 11.6 | 86.4 | 2.0 | -4.62 | 0.55 | 0.59 | 2.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 76247 | 9095 | 49 | 373 | 14 | 0 | 0 | logfile |