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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZHA | 11217 | 2023-12-17 | 2020-06-21 | 3.91 | 4.83 | 4.03 | 4.0 | 0.008 | 0.89 | 1.0 | 0.05 | 15.86 | 0.01 | 2.183 | 25.26 | 0.10 | 9.6 | 90.2 | 0.2 | -2.01 | 0.90 | 0.86 | 1.07 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 16.92 | 0.00 | 2.185 | 16.26 | 0.12 | 6.8 | 93.2 | 0.0 | -0.44 | 0.38 | 0.90 | 0.86 | 0.95 | 38289 | 4707 | 5 | 49 | 28 | 0 | 0 | logfile |
✔ | 7XKT | 33270 | 2023-12-17 | 2022-04-20 | 2.2 | 2.42 | 2.32 | 2.4 | 0.029 | 1.85 | 0.0 | 0.12 | 20.88 | 0.01 | 2.223 | 2.63 | 1.33 | 1.2 | 98.8 | 0.0 | 1.53 | 0.59 | 0.82 | 4.13 | 2.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.33 | 0.00 | 2.154 | 3.56 | 0.44 | 1.9 | 98.1 | 0.0 | 4.08 | 1.06 | 0.57 | 0.82 | 4.23 | 34488 | 1992 | 36 | 0 | 108 | 444 | 16008 | logfile |
✘ | 7Z18 | 14444 | 2023-12-17 | 2022-02-24 | 1.98 | 2.40 | 2.04 | 2.3 | 0.008 | 0.94 | 0.0 | 0.06 | 15.45 | 0.01 | 1.726 | 3.36 | 1.19 | 1.9 | 98.1 | 0.0 | 1.45 | 0.79 | 0.82 | 5.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37659 | 2432 | 18 | 0 | 10 | 2 | 18660 | logfile |
✘ | 7UEB | 26471 | 2023-12-17 | 2022-03-21 | 3.08 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37570 | 4006 | 25 | 0 | 106 | 0 | 0 | logfile |
✘ | 7P2Y | 13174 | 2023-12-17 | 2021-07-06 | 3.1 | 3.84 | — | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 12.08 | 0.00 | 2.088 | 10.47 | 0.08 | 3.8 | 96.2 | 0.0 | 0.12 | 0.82 | 0.87 | 2.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37172 | 4904 | 30 | 0 | 9 | 3 | 0 | logfile |
✔ | 8SoK | 40660 | 2023-12-17 | 2023-04-28 | 4.1 | 4.25 | 4.03 | 4.0 | 0.005 | 0.76 | 0.0 | 0.09 | 13.71 | 0.01 | 2.084 | 5.31 | 1.02 | 9.8 | 89.7 | 0.6 | -3.40 | 0.77 | 0.67 | — | 4.0 | 0.003 | 0.63 | 0.0 | 0.09 | 13.61 | 0.00 | 1.958 | 8.86 | 0.00 | 8.0 | 91.9 | 0.1 | -1.72 | 0.68 | 0.75 | 0.62 | — | 37162 | 2335 | 8 | 10 | 2 | 0 | 18588 | logfile |
✘ | 7FD4 | 31534 | 2023-12-17 | 2021-07-16 | 2.4 | 3.11 | — | 2.9 | 0.011 | 1.19 | 5.0 | 0.07 | 11.32 | 0.01 | 2.212 | 5.69 | 0.41 | 6.5 | 93.2 | 0.3 | -3.71 | 0.69 | 0.66 | 3.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37182 | 4674 | 13 | 0 | 34 | 0 | 0 | logfile |
✘ | 7oF2 | 12867 | 2023-12-17 | 2021-05-04 | 2.7 | 3.20 | 2.66 | 2.9 | 0.003 | 0.54 | 0.0 | 0.04 | 18.33 | 0.01 | 1.840 | 4.36 | 0.01 | 3.1 | 96.9 | 0.0 | 1.20 | 0.89 | 0.89 | 3.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101195 | 8560 | 64 | 1466 | 91 | 0 | 0 | logfile |
✘ | 7oF3 | 12868 | 2023-12-17 | 2021-05-04 | 2.7 | 3.23 | 2.69 | 3.0 | 0.003 | 0.50 | 0.0 | 0.04 | 18.28 | 0.00 | 1.761 | 5.69 | 0.00 | 3.2 | 96.8 | 0.0 | 1.34 | 0.88 | 0.88 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101226 | 8627 | 61 | 1442 | 63 | 0 | 0 | logfile |
✘ | 7Z17 | 14443 | 2023-12-17 | 2022-02-24 | 2.57 | 2.96 | 2.68 | 2.9 | 0.005 | 0.53 | 0.0 | 0.04 | 10.98 | 0.00 | 1.726 | 6.80 | 0.84 | 2.9 | 97.1 | 0.0 | 1.01 | 0.72 | 0.77 | 3.79 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37592 | 2432 | 14 | 0 | 5 | 0 | 18669 | logfile |
✔ | 7XST | 33434 | 2023-12-17 | 2022-05-15 | 3.04 | 3.26 | 3.19 | 3.2 | 0.008 | 1.20 | 45.0 | 0.08 | 12.98 | 0.01 | 2.211 | 7.49 | 0.46 | 6.1 | 93.9 | 0.0 | -1.69 | 0.58 | 0.61 | 2.57 | 3.2 | 0.006 | 0.69 | 0.0 | 0.05 | 14.35 | 0.00 | 2.123 | 6.93 | 0.31 | 4.5 | 95.5 | 0.0 | -0.62 | 1.11 | 0.67 | 0.74 | 2.37 | 33532 | 4407 | 18 | 0 | 31 | 0 | 0 | logfile |
✘ | 7K1K | 22625 | 2023-12-17 | 2020-09-07 | 4.1 | 4.21 | — | 4.1 | 0.008 | 1.12 | 0.0 | 0.06 | 17.54 | 0.01 | 2.224 | 7.18 | 0.91 | 14.0 | 85.5 | 0.4 | -5.07 | 0.73 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38243 | 4620 | 7 | 74 | 0 | 0 | 0 | logfile |
✔ | 7F67 | 31475 | 2023-12-17 | 2021-06-24 | 3.59 | 4.25 | — | 3.8 | 0.002 | 0.53 | 0.0 | 0.04 | 12.72 | 0.00 | 2.187 | 8.17 | 0.09 | 4.9 | 95.1 | 0.0 | 0.36 | 0.87 | 0.84 | 2.31 | 3.8 | 0.003 | 0.58 | 0.0 | 0.04 | 14.25 | 0.00 | 2.164 | 9.58 | 0.24 | 5.7 | 94.3 | 0.0 | 0.48 | 0.32 | 0.87 | 0.84 | 2.04 | 37725 | 5358 | 18 | 0 | 28 | 0 | 0 | logfile |
✔ | 7UPY | 26678 | 2023-12-17 | 2022-04-18 | 3.1 | 3.18 | — | 3.2 | 0.014 | 1.86 | 17.0 | 0.11 | 13.58 | 0.01 | 1.682 | 5.08 | 2.22 | 5.7 | 93.4 | 0.9 | -1.19 | 0.67 | 0.77 | 3.76 | 3.1 | 0.004 | 0.68 | 0.0 | 0.05 | 14.59 | 0.00 | 2.134 | 8.34 | 0.15 | 4.3 | 95.6 | 0.1 | -0.03 | 0.58 | 0.73 | 0.85 | 3.05 | 37312 | 4619 | 46 | 0 | 109 | 0 | 0 | logfile |
✘ | 7FD5 | 31535 | 2023-12-17 | 2021-07-16 | 2.4 | 3.12 | — | 2.9 | 0.015 | 1.23 | 4.0 | 0.07 | 11.59 | 0.01 | 2.203 | 5.63 | 0.51 | 6.3 | 93.5 | 0.2 | -3.77 | 0.71 | 0.72 | 3.86 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37179 | 4674 | 13 | 0 | 34 | 0 | 0 | logfile |
✔ | 6PUS | 20480 | 2023-12-17 | 2019-07-18 | 3.7 | 4.57 | — | 3.8 | 0.009 | 1.11 | 0.0 | 0.06 | 15.68 | 0.01 | 2.208 | 9.08 | 1.64 | 7.9 | 91.6 | 0.5 | -3.61 | 0.75 | 0.84 | 1.56 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.68 | 0.00 | 2.170 | 10.55 | 0.19 | 7.2 | 92.7 | 0.1 | -0.18 | 0.39 | 0.75 | 0.84 | 1.73 | 37380 | 5224 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6PUR | 20479 | 2023-12-17 | 2019-07-18 | 4.4 | 5.34 | — | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 15.80 | 0.01 | 2.255 | 9.87 | 1.66 | 7.9 | 91.6 | 0.5 | -3.61 | 0.74 | 0.81 | — | 4.1 | 0.004 | 0.65 | 0.0 | 0.04 | 13.33 | 0.00 | 2.161 | 13.48 | 0.00 | 7.9 | 92.1 | 0.1 | 0.14 | 0.56 | 0.74 | 0.84 | — | 37268 | 5224 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 7SCB | 25032 | 2023-12-17 | 2021-09-27 | 2.5 | 3.49 | 2.56 | 3.0 | 0.007 | 1.51 | 3.0 | 0.08 | 17.11 | 0.02 | 2.465 | 3.44 | 2.69 | 3.6 | 96.2 | 0.2 | -4.74 | 0.88 | 0.84 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37229 | 4743 | 54 | 0 | 25 | 0 | 0 | logfile |
✘ | 7P7J | 13237 | 2023-12-17 | 2021-07-19 | 2.7 | 2.61 | — | 2.3 | 0.005 | 0.77 | 0.0 | 1.47 | 15.31 | 0.01 | 2.212 | 4.92 | 1.25 | 2.4 | 97.5 | 0.0 | -0.28 | 0.91 | 0.90 | 3.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 37448 | 4719 | 24 | 0 | 28 | 0 | 0 | logfile |
✔ | 8G9F | 29864 | 2023-12-17 | 2023-02-21 | 3.2 | 3.77 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.257 | 2.77 | 0.00 | 3.1 | 96.9 | 0.0 | 0.34 | 0.89 | 0.83 | 3.53 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 15.98 | 0.00 | 2.024 | 3.97 | 0.09 | 2.6 | 97.4 | 0.0 | 1.66 | 1.44 | 0.90 | 0.87 | 3.23 | 37540 | 2321 | 7 | 0 | 4 | 0 | 18758 | logfile |