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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UDG | 42149 | 2023-12-11 | 2023-09-28 | 4.98 | 6.27 | 5.10 | 5.0 | 0.004 | 0.65 | 0.0 | 0.04 | 11.43 | 0.00 | 2.089 | 3.07 | 0.00 | 2.8 | 97.1 | 0.2 | -0.18 | 0.86 | 0.74 | — | 5.0 | 0.002 | 0.52 | 0.0 | 0.04 | 11.70 | 0.00 | 1.998 | 11.26 | 0.00 | 4.4 | 95.4 | 0.2 | 0.66 | 1.06 | 0.87 | 0.75 | — | 19524 | 1317 | 7 | 0 | 0 | 0 | 9627 | logfile |
✔ | 7V02 | 26927 | 2023-12-11 | 2022-05-09 | 4.97 | 8.16 | 5.87 | 4.6 | 0.006 | 0.93 | 0.0 | 0.06 | 14.00 | 0.00 | 2.048 | 13.24 | 0.65 | 4.8 | 95.1 | 0.0 | -1.12 | 0.83 | 0.64 | — | 4.7 | 0.004 | 0.68 | 0.0 | 0.04 | 14.49 | 0.00 | 2.119 | 25.23 | 0.00 | 5.0 | 95.0 | 0.0 | -0.53 | 1.15 | 0.91 | 0.82 | — | 17417 | 2070 | 9 | 29 | 0 | 0 | 0 | logfile |
✔ | 7YMY | 33947 | 2023-12-14 | 2022-07-29 | 4.96 | 9.09 | 5.33 | 5.2 | 0.006 | 0.96 | 3.0 | 0.06 | 15.46 | 0.01 | 2.203 | 11.52 | 0.50 | 8.6 | 91.2 | 0.2 | -2.07 | 0.89 | 0.80 | — | 5.2 | 0.003 | 0.65 | 0.0 | 0.05 | 14.18 | 0.00 | 2.090 | 23.15 | 0.00 | 7.7 | 92.3 | 0.0 | -1.40 | 1.24 | 0.91 | 0.85 | — | 27677 | 3498 | 15 | 0 | 46 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-12-14 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7P2P | 13171 | 2023-12-07 | 2021-07-06 | 4.9 | 4.40 | 5.09 | 4.3 | 0.005 | 1.10 | 0.0 | 0.07 | 11.50 | 0.01 | 2.325 | 4.27 | 0.19 | 8.1 | 91.9 | 0.0 | -3.94 | 0.76 | 0.66 | — | 4.2 | 0.003 | 0.80 | 0.0 | 0.05 | 12.90 | 0.00 | 2.167 | 16.98 | 0.19 | 8.1 | 91.9 | 0.0 | -1.73 | 1.08 | 0.78 | 0.72 | — | 4783 | 587 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 7P2Q | 13172 | 2023-12-07 | 2021-07-06 | 4.9 | 4.54 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.05 | 9.06 | 0.01 | 2.264 | 4.17 | 0.00 | 5.0 | 95.0 | 0.0 | -3.09 | 0.77 | 0.72 | — | 4.3 | 0.003 | 0.77 | 0.0 | 0.04 | 12.69 | 0.00 | 2.167 | 12.63 | 0.00 | 5.4 | 94.6 | 0.0 | -0.58 | 1.66 | 0.80 | 0.74 | — | 4780 | 587 | 5 | 0 | 5 | 0 | 0 | logfile |
✔ | 5VoT | 8721 | 2023-12-11 | 2017-05-03 | 4.9 | 4.98 | — | 4.9 | 0.004 | 0.67 | 0.0 | 0.04 | 7.57 | 0.00 | 2.126 | 11.91 | 0.00 | 8.5 | 91.5 | 0.0 | -4.03 | 0.63 | 0.71 | — | 4.9 | 0.003 | 0.69 | 0.0 | 0.04 | 11.01 | 0.00 | 2.137 | 14.03 | 0.00 | 6.3 | 93.7 | 0.0 | 0.08 | 0.85 | 0.65 | 0.80 | — | 16463 | 2322 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BWA | 30231 | 2023-12-09 | 2020-04-14 | 4.9 | 5.10 | 4.70 | 4.8 | 0.004 | 0.77 | 0.0 | 0.05 | 15.31 | 0.00 | 1.970 | 41.05 | 0.00 | 13.4 | 86.6 | 0.0 | -4.15 | 0.80 | 0.64 | — | 4.8 | 0.003 | 0.74 | 0.0 | 0.05 | 14.14 | 0.00 | 2.136 | 19.42 | 0.00 | 7.9 | 92.1 | 0.0 | -2.97 | 1.69 | 0.79 | 0.60 | — | 11670 | 1444 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VAB | 21135 | 2023-12-07 | 2019-12-17 | 4.9 | 6.51 | — | 6.8 | 0.005 | 0.91 | 0.0 | 0.06 | 8.70 | 0.01 | 2.264 | 14.98 | 0.00 | 6.8 | 93.2 | 0.0 | -3.84 | 0.71 | 0.69 | — | 6.6 | 0.004 | 0.69 | 0.0 | 0.04 | 4.96 | 0.00 | 2.132 | 7.42 | 0.00 | 8.6 | 91.4 | 0.0 | -0.31 | 2.71 | 0.73 | 0.69 | — | 4642 | 938 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S0E | 24788 | 2023-12-08 | 2021-08-30 | 4.9 | 4.98 | — | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 13.44 | 0.01 | 1.886 | 21.60 | 1.22 | 8.1 | 91.3 | 0.7 | -1.76 | 0.77 | 0.67 | — | 4.8 | 0.003 | 0.76 | 0.0 | 0.05 | 12.97 | 0.01 | 2.041 | 19.51 | 0.00 | 9.0 | 90.8 | 0.2 | -1.85 | 1.18 | 0.78 | 0.72 | — | 8248 | 1076 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q9i | 13870 | 2023-12-15 | 2021-11-12 | 4.9 | 5.59 | — | 5.3 | 0.004 | 0.57 | 0.0 | 0.04 | 11.10 | 0.00 | 2.216 | 4.73 | 0.80 | 3.4 | 96.5 | 0.0 | -0.34 | 0.76 | 0.63 | — | 5.3 | 0.003 | 0.65 | 0.0 | 0.04 | 11.25 | 0.00 | 2.028 | 15.63 | 0.00 | 3.3 | 96.6 | 0.0 | -0.26 | 1.93 | 0.79 | 0.70 | — | 30966 | 3881 | 24 | 0 | 53 | 0 | 0 | logfile |
✔ | 6R23 | 4708 | 2023-12-07 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.61 | 0.0 | 0.04 | 16.41 | 0.00 | 2.466 | 11.77 | 0.00 | 9.0 | 91.0 | 0.0 | -0.07 | 3.42 | 0.60 | 0.74 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JTD | 36641 | 2023-12-11 | 2023-06-21 | 4.9 | 4.51 | 4.64 | 4.6 | 0.005 | 0.93 | 0.0 | 0.07 | 14.17 | 0.00 | 2.048 | 20.29 | 0.00 | 3.8 | 96.1 | 0.1 | -0.29 | 0.63 | 0.55 | — | 4.6 | 0.003 | 0.83 | 0.0 | 0.05 | 12.88 | 0.00 | 2.068 | 21.12 | 0.00 | 5.3 | 94.7 | 0.0 | -0.71 | 0.68 | 0.67 | 0.64 | — | 17275 | 1978 | 51 | 0 | 128 | 0 | 0 | logfile |
✔ | 5LMX | 4088 | 2023-12-15 | 2016-08-02 | 4.9 | 5.64 | — | 4.9 | 0.011 | 1.55 | 0.0 | 0.06 | 18.69 | 0.01 | 0.614 | 16.48 | 8.43 | 6.5 | 92.9 | 0.6 | -2.70 | 0.80 | 0.62 | — | 4.9 | 0.003 | 0.71 | 0.0 | 0.04 | 14.49 | 0.00 | 2.014 | 17.77 | 0.00 | 4.5 | 95.4 | 0.0 | -0.20 | 2.23 | 0.88 | 0.79 | — | 31118 | 3918 | 19 | 0 | 6 | 0 | 0 | logfile |
✔ | 6SKM | 10228 | 2023-12-09 | 2019-08-16 | 4.9 | 5.09 | 4.66 | 4.9 | 0.004 | 0.64 | 0.0 | 0.04 | 9.23 | 0.00 | 1.449 | 9.83 | 0.18 | 1.4 | 98.6 | 0.0 | -1.03 | 0.68 | 0.74 | — | 4.9 | 0.004 | 0.82 | 0.0 | 0.05 | 12.95 | 0.01 | 2.147 | 22.65 | 0.18 | 3.4 | 96.6 | 0.0 | -0.07 | 1.79 | 0.71 | 0.81 | — | 10336 | 1320 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oSL | 17160 | 2023-12-10 | 2023-04-19 | 4.9 | 8.34 | 6.27 | 6.8 | 0.005 | 0.80 | 0.0 | 0.05 | 28.01 | 0.00 | 2.363 | 2.30 | 0.00 | 1.1 | 98.9 | 0.0 | -0.07 | 0.81 | 0.71 | — | 7.0 | 0.012 | 1.04 | 0.0 | 0.06 | 35.58 | 0.01 | 1.810 | 186.47 | 0.00 | 13.0 | 86.5 | 0.5 | -2.30 | 3.51 | 0.87 | 0.83 | — | 13541 | 1441 | 14 | 294 | 0 | 0 | 301 | logfile |
✔ | 8SAL | 40273 | 2023-12-11 | 2023-04-01 | 4.9 | 5.54 | 4.74 | 5.0 | 0.005 | 0.89 | 0.0 | 0.05 | 13.67 | 0.01 | 2.065 | 4.56 | 0.00 | 8.4 | 91.4 | 0.1 | -2.31 | 0.76 | 0.70 | — | 5.0 | 0.004 | 0.83 | 0.0 | 0.05 | 13.29 | 0.01 | 2.042 | 24.63 | 0.00 | 9.2 | 90.7 | 0.1 | -1.99 | 2.48 | 0.79 | 0.77 | — | 18435 | 2343 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oSH | 17153 | 2023-12-08 | 2023-04-18 | 4.9 | 5.59 | 5.45 | 4.9 | 0.006 | 0.94 | 0.0 | 0.06 | 3.38 | 0.00 | 2.299 | 5.83 | 0.00 | 11.2 | 88.7 | 0.1 | -0.55 | 0.82 | 0.82 | — | 4.9 | 0.003 | 0.65 | 0.0 | 0.04 | 4.66 | 0.00 | 2.198 | 8.69 | 0.00 | 15.1 | 84.9 | 0.0 | -0.88 | 0.53 | 0.83 | 0.85 | — | 6770 | 1372 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PoM | 20416 | 2023-12-07 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 24.84 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 4.9 | 0.010 | 1.23 | 0.0 | 0.06 | 26.31 | 0.01 | 1.966 | 57.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.74 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 3J6F | 5896 | 2023-12-09 | 2014-02-19 | 4.9 | 4.97 | — | 4.9 | 0.021 | 2.64 | 64.0 | 0.14 | 14.01 | 0.01 | 2.069 | 5.57 | 0.14 | 3.1 | 96.3 | 0.6 | -1.05 | 0.62 | 0.66 | — | 4.9 | 0.003 | 0.75 | 0.0 | 0.05 | 14.43 | 0.01 | 1.807 | 20.81 | 0.06 | 2.9 | 97.1 | 0.0 | 0.36 | 2.79 | 0.68 | 0.81 | — | 60903 | 7686 | 45 | 9 | 18 | 36 | 0 | logfile |